| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83720681
Identifier: 83720681
GI number: 83720681
Start: 1130365
End: 1130871
Strand: Direct
Name: 83720681
Synonym: BTH_I0992
Alternate gene names: NA
Gene position: 1130365-1130871 (Clockwise)
Preceding gene: 83721186
Following gene: 83721665
Centisome position: 29.67
GC content: 67.65
Gene sequence:
>507_bases TTGTGCCGCCTCAGGCGTTTTTGCCTCTCGACCCGCGAGTTCCGGCGGATTCGGCGCGATGTGCTACCTTTTTCTATGCG CCCGGCACCGACAGCCGGTTGCGCCTTTTCACGGAGAGATTCGATGAAAGCACATCGTACGCTGTGGATTTCGATGCTCG CTGCCGGCGCGCTCGTGTCATCGCTCGCCGCCGCTCAACCTCATGGCCGGGGCGGACCGGGCGACGAACGCCACGGGCCG CCTCCCGGCAGGCATGTCGGGGGCGATCACGGCAAGCGCGGCGAATACGGCGGCCCGCGTCCCGGCGAGCACCGCGGCGA CGAAAACGCCGCTTGGCACCGCGGAGATCGTCTGCCGGACGAATACCGGGACCGCCAGTACGTGATCGACGACTGGCGCG GGTACCACCTGTCGCCGCCGCCGCGCGGCTATCACTGGGTCGGGATCGGCGGCGACTACCTGCTCGTGCGCATCTCGACG GGCGTCATTCTCCAGATCGGACCGTAA
Upstream 100 bases:
>100_bases CGATGGGGCGGCGGAGCGGAAGATCGGAGACGGAAGACAGGGCGGGAACAGAAAGCCGGCTGCGGCGATCCGATAGCGGC ATCGCCGTCGAATCGACGAT
Downstream 100 bases:
>100_bases GCCGGGCCGTCGCGAGGCATGCCGATCGCCGTTTTCCGCGACACAGGGCGCGGCGGCCGATACGGATGCCTCGCACATCC CGTCTGCCGGCGGGTTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like; Integral Membrane Protein
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MCRLRRFCLSTREFRRIRRDVLPFSMRPAPTAGCAFSRRDSMKAHRTLWISMLAAGALVSSLAAAQPHGRGGPGDERHGP PPGRHVGGDHGKRGEYGGPRPGEHRGDENAAWHRGDRLPDEYRDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRIST GVILQIGP
Sequences:
>Translated_168_residues MCRLRRFCLSTREFRRIRRDVLPFSMRPAPTAGCAFSRRDSMKAHRTLWISMLAAGALVSSLAAAQPHGRGGPGDERHGP PPGRHVGGDHGKRGEYGGPRPGEHRGDENAAWHRGDRLPDEYRDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRIST GVILQIGP >Mature_168_residues MCRLRRFCLSTREFRRIRRDVLPFSMRPAPTAGCAFSRRDSMKAHRTLWISMLAAGALVSSLAAAQPHGRGGPGDERHGP PPGRHVGGDHGKRGEYGGPRPGEHRGDENAAWHRGDRLPDEYRDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRIST GVILQIGP
Specific function: Unknown
COG id: COG5455
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18811; Mature: 18811
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRLRRFCLSTREFRRIRRDVLPFSMRPAPTAGCAFSRRDSMKAHRTLWISMLAAGALVS CCHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLAAAQPHGRGGPGDERHGPPPGRHVGGDHGKRGEYGGPRPGEHRGDENAAWHRGDRLPD HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH EYRDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGVILQIGP HHCCCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEECC >Mature Secondary Structure MCRLRRFCLSTREFRRIRRDVLPFSMRPAPTAGCAFSRRDSMKAHRTLWISMLAAGALVS CCHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SLAAAQPHGRGGPGDERHGPPPGRHVGGDHGKRGEYGGPRPGEHRGDENAAWHRGDRLPD HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH EYRDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGVILQIGP HHCCCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA