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The map label for this gene is yhcM [H]

Identifier: 83721119

GI number: 83721119

Start: 2910636

End: 2911733

Strand: Reverse

Name: yhcM [H]

Synonym: BTH_I2553

Alternate gene names: 83721119

Gene position: 2911733-2910636 (Counterclockwise)

Preceding gene: 83720959

Following gene: 83719471

Centisome position: 76.44

GC content: 64.75

Gene sequence:

>1098_bases
ATGAACGTCACCGAATACTACGAGCACGAGCTGAAGACGCGCGGCTATCAGTCCGATGCCGCGCAGCGCGCCGCGGTCGA
ACGCCTGCAGCGTTGCTATGGCGAATGGGTTGCCTACAAGGCGCGTCGCTCGAATGCGTTCAAGAAACTCGTCATCCGCC
CGGACTTGCCGCGCGGCGTCTACATGTGGGGCGGCGTCGGGCGCGGCAAGAGCTTCCTGATGGACAGCTTCTACGCGGTC
GTGCCGGTGCAGCGCAAGACGCGGCTGCATTTCCACGAGTTCATGCGCGAAGTGCATCGCGAGCTGGAGGAGCTCAAAGG
GCAGGCCGATCCGCTCGACGAGCTCGCGCGCCGGATCGCGAAGCGCTACCGGCTCATCTGCTTCGACGAATTCCACGTGT
CGGACATCGCCGACGCGATGATCCTGTATCGCCTGCTCGACCGGTTGTTCTCGAACGGCGTGCAGTTCGTGATGACGTCC
AACTACGATCCGGACGACCTCTATCCCGACGGCCTGCATCGCGACCGGATGCTGCCCGCGATCGCGCTTCTGAAGGACCG
GCTCGACGTGCTGAACGTCGATGCGGGCGTCGATTATCGGCAACGCACGCTCACGCAGGTGCGGATGTATCACACGCCGC
TCGGCGCGCAAGCCGATCGCGAGTTGCGCCATGCGTTCGCGCAGCTCGCCGCGGTGCCGGACGAGAGCCCGATCCTGCAC
ATCGAGAAGCGCGAGATCAAGGCGCTGCGCCGCGCGGACGGCGTCGTCTGGTTCGATTTCGCGACGCTCTGCGGCGGCCC
GCGCTCGCAGAACGATTATCTCGAGCTTGCGAGCCGCTTCCATGCGATCGTGCTGTCCGACGTGCCGCAGATGTCGCCGC
GGATGGCGTCCGAAGCGCGCCGCTTCACCTGGCTCATCGACGTGCTGTACGACCACAAGGTGAAGCTGCTGATGTCGGCC
GCGGTGCCGGCGGACGATCTTTACGTCGAAGGGCCGATGGCGAACGAATTCAGCCGCACGGTCTCGCGGATCGTCGAGAT
GCAGTCGAAGGAATATCTCGAGGCGCCGCGCCGCCTGATCGATACGTCGCTGACCTGA

Upstream 100 bases:

>100_bases
CAACGCAGCACCGCGCGCCGGCCCTCGCGGCCGGCGTCGCAGTTTCTCGGCGAAGGCGGGCGGGGTTTCCCGCTCGCCTT
CGTTTTTGCCGGTTTGCATG

Downstream 100 bases:

>100_bases
TCCGGGTGATGCGGGCGGCGGGGCGCTTTCGGCGCGCCGTGCGCCGCGAACGAACCGACCCGAATTCGAAAACGCGCGCA
GACGGTTAACTTCGGTTAAT

Product: ATPase, AFG1 type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNVTEYYEHELKTRGYQSDAAQRAAVERLQRCYGEWVAYKARRSNAFKKLVIRPDLPRGVYMWGGVGRGKSFLMDSFYAV
VPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFSNGVQFVMTS
NYDPDDLYPDGLHRDRMLPAIALLKDRLDVLNVDAGVDYRQRTLTQVRMYHTPLGAQADRELRHAFAQLAAVPDESPILH
IEKREIKALRRADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSDVPQMSPRMASEARRFTWLIDVLYDHKVKLLMSA
AVPADDLYVEGPMANEFSRTVSRIVEMQSKEYLEAPRRLIDTSLT

Sequences:

>Translated_365_residues
MNVTEYYEHELKTRGYQSDAAQRAAVERLQRCYGEWVAYKARRSNAFKKLVIRPDLPRGVYMWGGVGRGKSFLMDSFYAV
VPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFSNGVQFVMTS
NYDPDDLYPDGLHRDRMLPAIALLKDRLDVLNVDAGVDYRQRTLTQVRMYHTPLGAQADRELRHAFAQLAAVPDESPILH
IEKREIKALRRADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSDVPQMSPRMASEARRFTWLIDVLYDHKVKLLMSA
AVPADDLYVEGPMANEFSRTVSRIVEMQSKEYLEAPRRLIDTSLT
>Mature_365_residues
MNVTEYYEHELKTRGYQSDAAQRAAVERLQRCYGEWVAYKARRSNAFKKLVIRPDLPRGVYMWGGVGRGKSFLMDSFYAV
VPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFSNGVQFVMTS
NYDPDDLYPDGLHRDRMLPAIALLKDRLDVLNVDAGVDYRQRTLTQVRMYHTPLGAQADRELRHAFAQLAAVPDESPILH
IEKREIKALRRADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSDVPQMSPRMASEARRFTWLIDVLYDHKVKLLMSA
AVPADDLYVEGPMANEFSRTVSRIVEMQSKEYLEAPRRLIDTSLT

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=396, Percent_Identity=34.0909090909091, Blast_Score=236, Evalue=3e-62,
Organism=Escherichia coli, GI1789627, Length=363, Percent_Identity=44.6280991735537, Blast_Score=290, Evalue=1e-79,
Organism=Caenorhabditis elegans, GI17505769, Length=415, Percent_Identity=32.0481927710843, Blast_Score=208, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6320783, Length=321, Percent_Identity=36.1370716510903, Blast_Score=179, Evalue=6e-46,
Organism=Drosophila melanogaster, GI20129913, Length=349, Percent_Identity=34.3839541547278, Blast_Score=188, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42363; Mature: 42363

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTEYYEHELKTRGYQSDAAQRAAVERLQRCYGEWVAYKARRSNAFKKLVIRPDLPRGV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCE
YMWGGVGRGKSFLMDSFYAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIA
EEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KRYRLICFDEFHVSDIADAMILYRLLDRLFSNGVQFVMTSNYDPDDLYPDGLHRDRMLPA
HHHHEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH
IALLKDRLDVLNVDAGVDYRQRTLTQVRMYHTPLGAQADRELRHAFAQLAAVPDESPILH
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
IEKREIKALRRADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSDVPQMSPRMASEAR
EHHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RFTWLIDVLYDHKVKLLMSAAVPADDLYVEGPMANEFSRTVSRIVEMQSKEYLEAPRRLI
HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTSLT
HCCCC
>Mature Secondary Structure
MNVTEYYEHELKTRGYQSDAAQRAAVERLQRCYGEWVAYKARRSNAFKKLVIRPDLPRGV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCE
YMWGGVGRGKSFLMDSFYAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIA
EEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KRYRLICFDEFHVSDIADAMILYRLLDRLFSNGVQFVMTSNYDPDDLYPDGLHRDRMLPA
HHHHEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH
IALLKDRLDVLNVDAGVDYRQRTLTQVRMYHTPLGAQADRELRHAFAQLAAVPDESPILH
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
IEKREIKALRRADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSDVPQMSPRMASEAR
EHHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RFTWLIDVLYDHKVKLLMSAAVPADDLYVEGPMANEFSRTVSRIVEMQSKEYLEAPRRLI
HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTSLT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]