| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is proP [H]
Identifier: 83721118
GI number: 83721118
Start: 736464
End: 738122
Strand: Reverse
Name: proP [H]
Synonym: BTH_I0640
Alternate gene names: 83721118
Gene position: 738122-736464 (Counterclockwise)
Preceding gene: 83719031
Following gene: 83720150
Centisome position: 19.38
GC content: 64.62
Gene sequence:
>1659_bases ATGGCAACGGTTGGCGGACAAATTGCGCACGCGCCGATGACGGGCGACGAAAAGCGCGTGATCTTCGCATCGTCGCTCGG CACCGTGTTCGAGTGGTACGACTTCTATCTGGCCGGCTCGCTGGCGGCCTACATCAGCAAGAGCTTCTTTTCCGGCGTCA ATCCGACCGCGGCGTTCATCTTCACGCTGCTCGGCTTCGCGGCGGGCTTCGCGGTCCGGCCCTTCGGCGCGATCGTGTTC GGCCGCCTCGGCGACCTCGTCGGCCGCAAGCACACATTCCTCATCACGATCGTGATCATGGGGATCTCGACCTTCGTCGT GGGCTTCCTGCCGGGCTACGCATCGATCGGCATCGCCGCGCCCGTGATCTTCATCGCGATGCGGCTGATGCAGGGCCTCG CGCTCGGCGGCGAGTACGGCGGCGCGGCGACCTACGTCGCCGAGCACGCGCCCGCGCATCGCCGCGGCTTCTATACGTCG TGGATCCAGACGACCGCGACGCTCGGCCTGTTCCTGTCGCTGCTCGTGATCCTCGGCGTGCGCACCGCGATCGGCGAGGA AGCGTTCGGCAACTGGGGCTGGCGCGTGCCGTTCGTCGCGTCGATCCTGCTGCTCGCCGTGTCCGTGTGGATCCGCCTGC AACTGAACGAGTCGCCGGTGTTCCTGCGGATCAAGGCCGAGGGCAAGACGTCGAAGGCGCCGCTCACGGAAGCGTTCGGC CAATGGAAGAACCTGAAGATCGTGATCCTCGCGCTGATCGGGCTGACGGCCGGCCAGGCGGTTGTCTGGTACACGGGCCA GTTCTATGCGCTCTTCTTCCTCACGCAAACGCTGAAGGTCGACGGAGGAAGCGCGAACATCCTGATCGCGCTCGCCCTTT TGATCGGCACGCCGTTCTTCGTGTTCTTCGGCTCGCTGTCGGACAAGATCGGCCGCAAGCCGATCATCCTCGCCGGCTGC CTGATCGCCGCGCTCACCTACTTCCCGCTCTTCAAGGCGCTCACGCACTTCGCGAATCCGGCGCTCGAGGCGGCGACGCA AAAGGCGCCGATCACCGTGGTCGCCAATCCCGGCGAATGCTCGTTCCAGTTCAACCCGGTGGGCACGGCGAAATTCACGT CGTCCTGCGACATCGCGAAGAGCGCGCTCGCGAAATCGGGCCTCAATTACGAGAACGTCGCCGCGCCGGCGGGCACGCTC GCGCAGATCAAGATCGGCGACACGGTGATCGACACGTATGACGGCAAGGCGGCCGACGCGAAGGACAAGGCGAAGGCATT CGACAAGACGCTCGCGTCGACGCTGAAGACGGCCGGCTACCCGACCAAGGCCGATCCGGCGCAGCTCAACTGGCCGATGA CGACGGCGATCCTCGCGATTCTCGTGATCTACGTGACGATGGTGTACGGGCCGATCGCGGCGATGCTGGTCGAGATGTTC CCGACGCGGATACGCTACACGTCGATGTCGCTGCCGTATCACATCGGCAACGGCTGGTTCGGCGGCTTCCTGCCGGCAAC CGCGTTCGCGATCGTCGCGGCCAACGGCGACATCTACTCGGGGCTCTGGTATCCGATCGGCGTCGCGCTCATCACGTTCG TGATCGGGCTGCTGTTCGTGAAGGAAACCAAGGATTCGAATATTTACGCGCAGGATTGA
Upstream 100 bases:
>100_bases CGCGGCGAGTCAGTGCGCCGTAAGTTTGCCCTCCAATAATCGACTCGGAGCCGCCCTCCCGAGAGGGCGCGCGACCTCTA TATCAAAATTGGAGACATTC
Downstream 100 bases:
>100_bases GGACGGGCGGGGCGCGGCGGGCTGCGGCGCGAGTGATGCCTCGGAGGGAGGGACGTCTAGCCCGTCGACCGTTGGGCGAC GGCCGGCGCCGGTTGGCGTC
Product: major facilitator family transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MATVGGQIAHAPMTGDEKRVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVF GRLGDLVGRKHTFLITIVIMGISTFVVGFLPGYASIGIAAPVIFIAMRLMQGLALGGEYGGAATYVAEHAPAHRRGFYTS WIQTTATLGLFLSLLVILGVRTAIGEEAFGNWGWRVPFVASILLLAVSVWIRLQLNESPVFLRIKAEGKTSKAPLTEAFG QWKNLKIVILALIGLTAGQAVVWYTGQFYALFFLTQTLKVDGGSANILIALALLIGTPFFVFFGSLSDKIGRKPIILAGC LIAALTYFPLFKALTHFANPALEAATQKAPITVVANPGECSFQFNPVGTAKFTSSCDIAKSALAKSGLNYENVAAPAGTL AQIKIGDTVIDTYDGKAADAKDKAKAFDKTLASTLKTAGYPTKADPAQLNWPMTTAILAILVIYVTMVYGPIAAMLVEMF PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAANGDIYSGLWYPIGVALITFVIGLLFVKETKDSNIYAQD
Sequences:
>Translated_552_residues MATVGGQIAHAPMTGDEKRVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVF GRLGDLVGRKHTFLITIVIMGISTFVVGFLPGYASIGIAAPVIFIAMRLMQGLALGGEYGGAATYVAEHAPAHRRGFYTS WIQTTATLGLFLSLLVILGVRTAIGEEAFGNWGWRVPFVASILLLAVSVWIRLQLNESPVFLRIKAEGKTSKAPLTEAFG QWKNLKIVILALIGLTAGQAVVWYTGQFYALFFLTQTLKVDGGSANILIALALLIGTPFFVFFGSLSDKIGRKPIILAGC LIAALTYFPLFKALTHFANPALEAATQKAPITVVANPGECSFQFNPVGTAKFTSSCDIAKSALAKSGLNYENVAAPAGTL AQIKIGDTVIDTYDGKAADAKDKAKAFDKTLASTLKTAGYPTKADPAQLNWPMTTAILAILVIYVTMVYGPIAAMLVEMF PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAANGDIYSGLWYPIGVALITFVIGLLFVKETKDSNIYAQD >Mature_551_residues ATVGGQIAHAPMTGDEKRVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFIFTLLGFAAGFAVRPFGAIVFG RLGDLVGRKHTFLITIVIMGISTFVVGFLPGYASIGIAAPVIFIAMRLMQGLALGGEYGGAATYVAEHAPAHRRGFYTSW IQTTATLGLFLSLLVILGVRTAIGEEAFGNWGWRVPFVASILLLAVSVWIRLQLNESPVFLRIKAEGKTSKAPLTEAFGQ WKNLKIVILALIGLTAGQAVVWYTGQFYALFFLTQTLKVDGGSANILIALALLIGTPFFVFFGSLSDKIGRKPIILAGCL IAALTYFPLFKALTHFANPALEAATQKAPITVVANPGECSFQFNPVGTAKFTSSCDIAKSALAKSGLNYENVAAPAGTLA QIKIGDTVIDTYDGKAADAKDKAKAFDKTLASTLKTAGYPTKADPAQLNWPMTTAILAILVIYVTMVYGPIAAMLVEMFP TRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAANGDIYSGLWYPIGVALITFVIGLLFVKETKDSNIYAQD
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=328, Percent_Identity=35.6707317073171, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1788292, Length=326, Percent_Identity=33.7423312883436, Blast_Score=182, Evalue=5e-47, Organism=Escherichia coli, GI1788942, Length=333, Percent_Identity=35.1351351351351, Blast_Score=172, Evalue=6e-44, Organism=Escherichia coli, GI1789941, Length=346, Percent_Identity=35.8381502890173, Blast_Score=149, Evalue=6e-37, Organism=Escherichia coli, GI87082231, Length=223, Percent_Identity=29.1479820627803, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI87082404, Length=323, Percent_Identity=24.4582043343653, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 58999; Mature: 58867
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVGGQIAHAPMTGDEKRVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFI CCCCCCCEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FTLLGFAAGFAVRPFGAIVFGRLGDLVGRKHTFLITIVIMGISTFVVGFLPGYASIGIAA HHHHHHHHCCHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH PVIFIAMRLMQGLALGGEYGGAATYVAEHAPAHRRGFYTSWIQTTATLGLFLSLLVILGV HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH RTAIGEEAFGNWGWRVPFVASILLLAVSVWIRLQLNESPVFLRIKAEGKTSKAPLTEAFG HHHHCHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCCCHHHHHC QWKNLKIVILALIGLTAGQAVVWYTGQFYALFFLTQTLKVDGGSANILIALALLIGTPFF CCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCHHH VFFGSLSDKIGRKPIILAGCLIAALTYFPLFKALTHFANPALEAATQKAPITVVANPGEC HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCC SFQFNPVGTAKFTSSCDIAKSALAKSGLNYENVAAPAGTLAQIKIGDTVIDTYDGKAADA EEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCC KDKAKAFDKTLASTLKTAGYPTKADPAQLNWPMTTAILAILVIYVTMVYGPIAAMLVEMF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAANGDIYSGLWYPIGVALITFVIGLLFV HHHEEEEEECCCEEECCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH KETKDSNIYAQD HCCCCCCCEECC >Mature Secondary Structure ATVGGQIAHAPMTGDEKRVIFASSLGTVFEWYDFYLAGSLAAYISKSFFSGVNPTAAFI CCCCCCEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FTLLGFAAGFAVRPFGAIVFGRLGDLVGRKHTFLITIVIMGISTFVVGFLPGYASIGIAA HHHHHHHHCCHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH PVIFIAMRLMQGLALGGEYGGAATYVAEHAPAHRRGFYTSWIQTTATLGLFLSLLVILGV HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH RTAIGEEAFGNWGWRVPFVASILLLAVSVWIRLQLNESPVFLRIKAEGKTSKAPLTEAFG HHHHCHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCCCHHHHHC QWKNLKIVILALIGLTAGQAVVWYTGQFYALFFLTQTLKVDGGSANILIALALLIGTPFF CCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCHHH VFFGSLSDKIGRKPIILAGCLIAALTYFPLFKALTHFANPALEAATQKAPITVVANPGEC HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCC SFQFNPVGTAKFTSSCDIAKSALAKSGLNYENVAAPAGTLAQIKIGDTVIDTYDGKAADA EEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCC KDKAKAFDKTLASTLKTAGYPTKADPAQLNWPMTTAILAILVIYVTMVYGPIAAMLVEMF HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTRIRYTSMSLPYHIGNGWFGGFLPATAFAIVAANGDIYSGLWYPIGVALITFVIGLLFV HHHEEEEEECCCEEECCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH KETKDSNIYAQD HCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]