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The map label for this gene is qseC [H]

Identifier: 83719031

GI number: 83719031

Start: 738345

End: 739898

Strand: Reverse

Name: qseC [H]

Synonym: BTH_I0641

Alternate gene names: 83719031

Gene position: 739898-738345 (Counterclockwise)

Preceding gene: 83719681

Following gene: 83721118

Centisome position: 19.42

GC content: 71.04

Gene sequence:

>1554_bases
ATGCCGGTCCGTTCCTTCCACGCCGCGCACCGTGCGGCCGCCGCGGCGCCCGATGCGGACGCCGCGCGCGACGCCCGCTA
CGAGAACCCGTTCGCGCCGCCGGACGAAACCGACCCCGCCGAAGGCCCTCGCCCCCGCTCGCTGTTCGGCGAGATTCTCG
ACTGGATGCTCGCGCCGCTCCTCCTGCTGTGGCCGATGAGCATCGCCGTCACCTATCTCGTCGCGAAGACGATCGCGAAC
GGCCCGTTCGATCGCGCGCTCGAAACCGACGCGTACGTGCTCGCGCGGCAGATCGCGCCGGTCAACGGCGTCGCCGAACT
GAAGCTACCGCAGGCGACGCTCGACTTCCTGCGCGCCGACAACGTCGACAACCTCTACTTCCAAGTGCTCGGCACGCGCG
GCGAGCTCGTCGCGGGCGAAGCGGATCTGCCGCTGCCGCGCGACGACGACCGGCCGCCGCCCGGCGTCGTCGTATTCCGC
GACGATCTGCTGCGCGGCAACGACGTGCGCGTCGCGTACACGAGCGTCGCGCTGCCGGGCGCGACGGGCTCGCAACCCGT
TCTCGTGCAGGTCGGCGAGACGCTCGACAAGCGCAACGCGCTCGCCAACGACATCATCAAGGGCGTGATCCTGCCGCAGT
TCGTGATCCTGCCGCTCGCGATCCTGCTCGTCTGGTTCGGGCTGTCGCGCGGGCTCGCGCCGCTCACCGCGCTGCAGGCG
CATATCCGCGGCCGGCGCCCGGACGACCTGTCGCCCGTCGAGGCGCGCCGCGCGCCGCCCGAGATCGAGCCGCTCGTCAC
GTCGTTCAACGATCTGCTCGCGCGCCTCGAGCAGAACATCACGCTGCAAAAGCGCTTCATCGCCGACGCCGCACACCAGA
TGAAGACGCCGCTCGCCGGCTTGCGCACGCAGGCCGAATTCGCGCTGCGCCACGAGGTGCCGGACGACGTCGCGCGCTCG
CTCGAGCAGATCGCGACGAGCTCCGGGCAGGCGGCGCGGCTCGTCACGCAACTGCTCGCGCTCGCGCGCGCGGAAAACCG
CGCGACAGGGCTCACGTTCGAGCCCGTCGAGATCGCGTCGCTCGCGCGGCAGGCCGTGCGCGACTGGGTGCAGGCCGCGC
TCGCGAAACAGATGGACCTCGGCTACGAAGGCCCGGACGCCGACGCCGCGCCGCTGCGCATCGACGGACATCCGGTGATG
CTGCGCGAGATGCTCGGCAACCTGATCGACAACGCGATCCGCTACACACCGACGGGCGGCCGCATCACCGTGCGCGTGCG
CGCCGATCACGCGGCGGGCGTCGTGCATCTCGAAGTCGAGGACACCGGCCCCGGCATTCCGGCGAACGAACGCGAGCGCG
TCGTCGAGCGCTTCTACCGCATCCTCGGCCGCGAAGGCGACGGCAGCGGGCTCGGTCTTGCAATCGTTCGCGAGATCGTC
GCGCAGCACGGCGGCACGCTGACGATCGACGACAACGTGTATCAGACGTCGCCGCGCCTCGCGGGCACGCTCGTGCGCGT
GAGCGTCGGCTTACGGGAAGGGGCCCCGGAATAA

Upstream 100 bases:

>100_bases
CCGCGAGCGACGCGCCGACCGGCGCCGCGCCGCCGCCGGCCGAAGCCGGCGCGAGCCAGTCGCTGCGCTAGCGCCGCCCA
CGAGCGAGCGGCCGAAGGCC

Downstream 100 bases:

>100_bases
CCCTAGGCGAAGCCGCCGCCCGCCCCTCCCCATAGGCGCAAAACAGAAAATTGCCATCAAATTAAAAGACAAAGAAAGAC
GAAGATCGACATAACGCGCA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MPVRSFHAAHRAAAAAPDADAARDARYENPFAPPDETDPAEGPRPRSLFGEILDWMLAPLLLLWPMSIAVTYLVAKTIAN
GPFDRALETDAYVLARQIAPVNGVAELKLPQATLDFLRADNVDNLYFQVLGTRGELVAGEADLPLPRDDDRPPPGVVVFR
DDLLRGNDVRVAYTSVALPGATGSQPVLVQVGETLDKRNALANDIIKGVILPQFVILPLAILLVWFGLSRGLAPLTALQA
HIRGRRPDDLSPVEARRAPPEIEPLVTSFNDLLARLEQNITLQKRFIADAAHQMKTPLAGLRTQAEFALRHEVPDDVARS
LEQIATSSGQAARLVTQLLALARAENRATGLTFEPVEIASLARQAVRDWVQAALAKQMDLGYEGPDADAAPLRIDGHPVM
LREMLGNLIDNAIRYTPTGGRITVRVRADHAAGVVHLEVEDTGPGIPANERERVVERFYRILGREGDGSGLGLAIVREIV
AQHGGTLTIDDNVYQTSPRLAGTLVRVSVGLREGAPE

Sequences:

>Translated_517_residues
MPVRSFHAAHRAAAAAPDADAARDARYENPFAPPDETDPAEGPRPRSLFGEILDWMLAPLLLLWPMSIAVTYLVAKTIAN
GPFDRALETDAYVLARQIAPVNGVAELKLPQATLDFLRADNVDNLYFQVLGTRGELVAGEADLPLPRDDDRPPPGVVVFR
DDLLRGNDVRVAYTSVALPGATGSQPVLVQVGETLDKRNALANDIIKGVILPQFVILPLAILLVWFGLSRGLAPLTALQA
HIRGRRPDDLSPVEARRAPPEIEPLVTSFNDLLARLEQNITLQKRFIADAAHQMKTPLAGLRTQAEFALRHEVPDDVARS
LEQIATSSGQAARLVTQLLALARAENRATGLTFEPVEIASLARQAVRDWVQAALAKQMDLGYEGPDADAAPLRIDGHPVM
LREMLGNLIDNAIRYTPTGGRITVRVRADHAAGVVHLEVEDTGPGIPANERERVVERFYRILGREGDGSGLGLAIVREIV
AQHGGTLTIDDNVYQTSPRLAGTLVRVSVGLREGAPE
>Mature_516_residues
PVRSFHAAHRAAAAAPDADAARDARYENPFAPPDETDPAEGPRPRSLFGEILDWMLAPLLLLWPMSIAVTYLVAKTIANG
PFDRALETDAYVLARQIAPVNGVAELKLPQATLDFLRADNVDNLYFQVLGTRGELVAGEADLPLPRDDDRPPPGVVVFRD
DLLRGNDVRVAYTSVALPGATGSQPVLVQVGETLDKRNALANDIIKGVILPQFVILPLAILLVWFGLSRGLAPLTALQAH
IRGRRPDDLSPVEARRAPPEIEPLVTSFNDLLARLEQNITLQKRFIADAAHQMKTPLAGLRTQAEFALRHEVPDDVARSL
EQIATSSGQAARLVTQLLALARAENRATGLTFEPVEIASLARQAVRDWVQAALAKQMDLGYEGPDADAAPLRIDGHPVML
REMLGNLIDNAIRYTPTGGRITVRVRADHAAGVVHLEVEDTGPGIPANERERVVERFYRILGREGDGSGLGLAIVREIVA
QHGGTLTIDDNVYQTSPRLAGTLVRVSVGLREGAPE

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. May activate qseB by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=438, Percent_Identity=29.2237442922374, Blast_Score=159, Evalue=4e-40,
Organism=Escherichia coli, GI1786783, Length=324, Percent_Identity=33.0246913580247, Blast_Score=150, Evalue=3e-37,
Organism=Escherichia coli, GI1790551, Length=291, Percent_Identity=32.3024054982818, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1790861, Length=272, Percent_Identity=30.5147058823529, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI1786600, Length=218, Percent_Identity=34.8623853211009, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788393, Length=230, Percent_Identity=30, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI145693157, Length=229, Percent_Identity=28.3842794759825, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI48994928, Length=225, Percent_Identity=28.8888888888889, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1788279, Length=295, Percent_Identity=27.4576271186441, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1790346, Length=244, Percent_Identity=29.0983606557377, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1787374, Length=309, Percent_Identity=29.7734627831715, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1788713, Length=214, Percent_Identity=23.3644859813084, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789149, Length=213, Percent_Identity=25.3521126760563, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87082128, Length=239, Percent_Identity=29.7071129707113, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787894, Length=239, Percent_Identity=28.8702928870293, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=27.9279279279279, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786912, Length=250, Percent_Identity=28.8, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789808, Length=235, Percent_Identity=25.9574468085106, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI87081816, Length=251, Percent_Identity=26.6932270916335, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 56048; Mature: 55917

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRSFHAAHRAAAAAPDADAARDARYENPFAPPDETDPAEGPRPRSLFGEILDWMLAPL
CCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LLLWPMSIAVTYLVAKTIANGPFDRALETDAYVLARQIAPVNGVAELKLPQATLDFLRAD
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCC
NVDNLYFQVLGTRGELVAGEADLPLPRDDDRPPPGVVVFRDDLLRGNDVRVAYTSVALPG
CCCCEEHEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCC
ATGSQPVLVQVGETLDKRNALANDIIKGVILPQFVILPLAILLVWFGLSRGLAPLTALQA
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HIRGRRPDDLSPVEARRAPPEIEPLVTSFNDLLARLEQNITLQKRFIADAAHQMKTPLAG
HHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHH
LRTQAEFALRHEVPDDVARSLEQIATSSGQAARLVTQLLALARAENRATGLTFEPVEIAS
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEECHHHHHH
LARQAVRDWVQAALAKQMDLGYEGPDADAAPLRIDGHPVMLREMLGNLIDNAIRYTPTGG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHEEECCCCC
RITVRVRADHAAGVVHLEVEDTGPGIPANERERVVERFYRILGREGDGSGLGLAIVREIV
EEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AQHGGTLTIDDNVYQTSPRLAGTLVRVSVGLREGAPE
HHCCCEEEECCCCEECCCHHHHHHHHEEEHHHCCCCC
>Mature Secondary Structure 
PVRSFHAAHRAAAAAPDADAARDARYENPFAPPDETDPAEGPRPRSLFGEILDWMLAPL
CCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LLLWPMSIAVTYLVAKTIANGPFDRALETDAYVLARQIAPVNGVAELKLPQATLDFLRAD
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCC
NVDNLYFQVLGTRGELVAGEADLPLPRDDDRPPPGVVVFRDDLLRGNDVRVAYTSVALPG
CCCCEEHEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCC
ATGSQPVLVQVGETLDKRNALANDIIKGVILPQFVILPLAILLVWFGLSRGLAPLTALQA
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HIRGRRPDDLSPVEARRAPPEIEPLVTSFNDLLARLEQNITLQKRFIADAAHQMKTPLAG
HHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHH
LRTQAEFALRHEVPDDVARSLEQIATSSGQAARLVTQLLALARAENRATGLTFEPVEIAS
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEECHHHHHH
LARQAVRDWVQAALAKQMDLGYEGPDADAAPLRIDGHPVMLREMLGNLIDNAIRYTPTGG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHEEECCCCC
RITVRVRADHAAGVVHLEVEDTGPGIPANERERVVERFYRILGREGDGSGLGLAIVREIV
EEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
AQHGGTLTIDDNVYQTSPRLAGTLVRVSVGLREGAPE
HHCCCEEEECCCCEECCCHHHHHHHHEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]