Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

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The map label for this gene is yahD [C]

Identifier: 83720945

GI number: 83720945

Start: 2435869

End: 2436591

Strand: Direct

Name: yahD [C]

Synonym: BTH_I2158

Alternate gene names: 83720945

Gene position: 2435869-2436591 (Clockwise)

Preceding gene: 83720220

Following gene: 83719175

Centisome position: 63.95

GC content: 66.11

Gene sequence:

>723_bases
ATGAAGTCGATCAAGCACTTGTCGAAACAACGCACGATGGGCGCCGTGCTGCGCACGCTCGCGGTGGCGGGTGGGCTCGG
CGCGCTCGCGGCGGCGTCCGCGCATGCGGAGTCGCTGGACGGGATCGTGAAGGCCGTCAAGTTCGACGACATCAAGGACA
TCGCGAAACAACTGAAGAATGGCCTCGACCCGAACACGGTGGCGCCGAACGGCGATCCGCTTCTCGTGATCGCCGCGCGC
GAGAAGTCCGACCAGGTCGCCGCCGCGCTCGCGGCCGCGCCGAACGTCGATCTCGGCAAGGAAGACAAGGCGGGCGAGAA
CGCGCTGATGCTCGCCGCGCTGAACGGCGATCTGCCGCTCGTGAAGCTGCTCGTCGACAAGGGCGCGGAAGTGAGTAAGA
AGGGCTGGTCGCCGCTCCACTATGCAGCGACGAACGGCAACGACGAGGTCGTCAAGTATCTGATCGACAAGTCCGCGTAC
ATCGACGCCGCGTCGCCGAACGGCACGACGCCGCTGATGATGGCCGCGCGCGGCAACCACGGCTCGACCGTCACGCTGCT
GCTCGATCAGGGCGCCGATCCCGCGCTGAAGAACCAGCTCGGCATCACCGCGCTCGACTTCGCGAAGCACTACAACGCGC
CGGACGCGACCGCGATCCTGTCGAAGCGCACGGTGCGCATCGGCGATGCGCCAGCGCCCGATGCGCAAAAGAGTGCAAAA
TAA

Upstream 100 bases:

>100_bases
AGGCGCTCGGCGCCGCGACGTCGCAGAACTTTTTCCGGCTGTTCAAGATCGCCCGCACGGGCGACGCCAGCCCAGTCAAC
CAGGGGTAGGAGCTGAAAAA

Downstream 100 bases:

>100_bases
GGGTTTTTGGCGCGGCGGCTTGCCGCGCCTTTCGAAGTATCGGCGGTTTCGCCTTCTGACATAAGGAAGATTCATGTTGC
GGGCTATGTTTTGCGCCGCC

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKSIKHLSKQRTMGAVLRTLAVAGGLGALAAASAHAESLDGIVKAVKFDDIKDIAKQLKNGLDPNTVAPNGDPLLVIAAR
EKSDQVAAALAAAPNVDLGKEDKAGENALMLAALNGDLPLVKLLVDKGAEVSKKGWSPLHYAATNGNDEVVKYLIDKSAY
IDAASPNGTTPLMMAARGNHGSTVTLLLDQGADPALKNQLGITALDFAKHYNAPDATAILSKRTVRIGDAPAPDAQKSAK

Sequences:

>Translated_240_residues
MKSIKHLSKQRTMGAVLRTLAVAGGLGALAAASAHAESLDGIVKAVKFDDIKDIAKQLKNGLDPNTVAPNGDPLLVIAAR
EKSDQVAAALAAAPNVDLGKEDKAGENALMLAALNGDLPLVKLLVDKGAEVSKKGWSPLHYAATNGNDEVVKYLIDKSAY
IDAASPNGTTPLMMAARGNHGSTVTLLLDQGADPALKNQLGITALDFAKHYNAPDATAILSKRTVRIGDAPAPDAQKSAK
>Mature_240_residues
MKSIKHLSKQRTMGAVLRTLAVAGGLGALAAASAHAESLDGIVKAVKFDDIKDIAKQLKNGLDPNTVAPNGDPLLVIAAR
EKSDQVAAALAAAPNVDLGKEDKAGENALMLAALNGDLPLVKLLVDKGAEVSKKGWSPLHYAATNGNDEVVKYLIDKSAY
IDAASPNGTTPLMMAARGNHGSTVTLLLDQGADPALKNQLGITALDFAKHYNAPDATAILSKRTVRIGDAPAPDAQKSAK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI223634006, Length=109, Percent_Identity=44.0366972477064, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI148596917, Length=128, Percent_Identity=35.9375, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI30425444, Length=154, Percent_Identity=33.7662337662338, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI188595682, Length=128, Percent_Identity=41.40625, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI38569428, Length=114, Percent_Identity=40.3508771929825, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI38569426, Length=114, Percent_Identity=40.3508771929825, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI52426737, Length=128, Percent_Identity=41.40625, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI52426735, Length=128, Percent_Identity=41.40625, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI30089994, Length=166, Percent_Identity=33.1325301204819, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI38176283, Length=166, Percent_Identity=33.1325301204819, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI32967601, Length=113, Percent_Identity=42.4778761061947, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI225543463, Length=163, Percent_Identity=34.3558282208589, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI28605137, Length=112, Percent_Identity=39.2857142857143, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI256574792, Length=114, Percent_Identity=36.8421052631579, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI70780355, Length=151, Percent_Identity=34.4370860927152, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI4506217, Length=112, Percent_Identity=39.2857142857143, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI70780357, Length=151, Percent_Identity=34.4370860927152, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI70780359, Length=151, Percent_Identity=34.4370860927152, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI215598574, Length=151, Percent_Identity=34.4370860927152, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI70780353, Length=151, Percent_Identity=34.4370860927152, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI225543461, Length=163, Percent_Identity=34.3558282208589, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI24233530, Length=110, Percent_Identity=41.8181818181818, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI68131557, Length=112, Percent_Identity=43.75, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI304361760, Length=112, Percent_Identity=43.75, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI304361757, Length=112, Percent_Identity=43.75, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI157739945, Length=107, Percent_Identity=41.1214953271028, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI12746412, Length=154, Percent_Identity=31.1688311688312, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI7657265, Length=107, Percent_Identity=42.0560747663551, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI268607595, Length=162, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI21956645, Length=104, Percent_Identity=41.3461538461538, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI62988328, Length=162, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI156142184, Length=127, Percent_Identity=33.0708661417323, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI87239981, Length=137, Percent_Identity=36.4963503649635, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI157266328, Length=123, Percent_Identity=32.520325203252, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI18079216, Length=125, Percent_Identity=32.8, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI13376842, Length=154, Percent_Identity=35.0649350649351, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI46519147, Length=95, Percent_Identity=42.1052631578947, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI41055989, Length=168, Percent_Identity=32.1428571428571, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI37620163, Length=95, Percent_Identity=42.1052631578947, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4506499, Length=135, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI134948558, Length=114, Percent_Identity=36.8421052631579, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI134948605, Length=114, Percent_Identity=36.8421052631579, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI19924156, Length=154, Percent_Identity=31.8181818181818, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI156142199, Length=141, Percent_Identity=28.3687943262411, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI7705831, Length=143, Percent_Identity=33.5664335664336, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI156142197, Length=141, Percent_Identity=28.3687943262411, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI116063534, Length=163, Percent_Identity=33.7423312883436, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI255982572, Length=143, Percent_Identity=33.5664335664336, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI22208951, Length=143, Percent_Identity=33.5664335664336, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI121582655, Length=156, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI71981411, Length=227, Percent_Identity=29.9559471365639, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI212646035, Length=157, Percent_Identity=35.031847133758, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI212646031, Length=157, Percent_Identity=35.031847133758, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI212646033, Length=157, Percent_Identity=35.031847133758, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71981389, Length=154, Percent_Identity=35.7142857142857, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71981414, Length=174, Percent_Identity=32.7586206896552, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25145251, Length=154, Percent_Identity=35.7142857142857, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17542700, Length=154, Percent_Identity=35.7142857142857, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI212645194, Length=171, Percent_Identity=35.0877192982456, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161082089, Length=135, Percent_Identity=38.5185185185185, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI161082099, Length=135, Percent_Identity=38.5185185185185, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI161082085, Length=135, Percent_Identity=38.5185185185185, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI161082092, Length=135, Percent_Identity=38.5185185185185, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI161082110, Length=149, Percent_Identity=37.5838926174497, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI161082096, Length=149, Percent_Identity=37.5838926174497, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI161082106, Length=149, Percent_Identity=37.5838926174497, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI161082081, Length=149, Percent_Identity=37.5838926174497, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281359521, Length=186, Percent_Identity=30.1075268817204, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281359519, Length=186, Percent_Identity=30.1075268817204, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28558752, Length=186, Percent_Identity=30.1075268817204, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28558750, Length=186, Percent_Identity=30.1075268817204, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28558756, Length=186, Percent_Identity=30.1075268817204, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28558754, Length=186, Percent_Identity=30.1075268817204, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI221330482, Length=138, Percent_Identity=36.231884057971, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221330474, Length=138, Percent_Identity=36.231884057971, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221330478, Length=138, Percent_Identity=36.231884057971, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221330480, Length=138, Percent_Identity=36.231884057971, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45551135, Length=138, Percent_Identity=36.231884057971, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45550479, Length=138, Percent_Identity=36.231884057971, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221330476, Length=138, Percent_Identity=36.231884057971, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28573593, Length=138, Percent_Identity=36.231884057971, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281363919, Length=138, Percent_Identity=36.231884057971, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45552223, Length=108, Percent_Identity=37.037037037037, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24650843, Length=154, Percent_Identity=32.4675324675325, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221472807, Length=108, Percent_Identity=37.037037037037, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17998549, Length=108, Percent_Identity=37.037037037037, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI28571867, Length=95, Percent_Identity=42.1052631578947, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571865, Length=95, Percent_Identity=42.1052631578947, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19921030, Length=147, Percent_Identity=37.4149659863946, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581260, Length=102, Percent_Identity=41.1764705882353, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581258, Length=102, Percent_Identity=41.1764705882353, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281362364, Length=151, Percent_Identity=33.112582781457, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24660357, Length=118, Percent_Identity=38.135593220339, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 24828; Mature: 24828

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MKSIKHLSKQRTMGAVLRTLAVAGGLGALAAASAHAESLDGIVKAVKFDDIKDIAKQLKN
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GLDPNTVAPNGDPLLVIAAREKSDQVAAALAAAPNVDLGKEDKAGENALMLAALNGDLPL
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHH
VKLLVDKGAEVSKKGWSPLHYAATNGNDEVVKYLIDKSAYIDAASPNGTTPLMMAARGNH
HHHHHHCCCCCHHCCCCCEEEEECCCCHHHHHHHHCCCCEEECCCCCCCCEEEEEEECCC
GSTVTLLLDQGADPALKNQLGITALDFAKHYNAPDATAILSKRTVRIGDAPAPDAQKSAK
CCEEEEEEECCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKSIKHLSKQRTMGAVLRTLAVAGGLGALAAASAHAESLDGIVKAVKFDDIKDIAKQLKN
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GLDPNTVAPNGDPLLVIAAREKSDQVAAALAAAPNVDLGKEDKAGENALMLAALNGDLPL
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHH
VKLLVDKGAEVSKKGWSPLHYAATNGNDEVVKYLIDKSAYIDAASPNGTTPLMMAARGNH
HHHHHHCCCCCHHCCCCCEEEEECCCCHHHHHHHHCCCCEEECCCCCCCCEEEEEEECCC
GSTVTLLLDQGADPALKNQLGITALDFAKHYNAPDATAILSKRTVRIGDAPAPDAQKSAK
CCEEEEEEECCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA