| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720848
Identifier: 83720848
GI number: 83720848
Start: 987749
End: 988267
Strand: Reverse
Name: 83720848
Synonym: BTH_I0867
Alternate gene names: NA
Gene position: 988267-987749 (Counterclockwise)
Preceding gene: 83719102
Following gene: 83719426
Centisome position: 25.94
GC content: 67.05
Gene sequence:
>519_bases ATGCATGCCCTTCAACGCCCGCTATTGTCGGCTCTCGCCGCCACCATTCTCGTCGCGACGCCGTCGTTCCGTCCCGCAAC CGCCGCAACCGCCACGGCCACCTTCACCGTCTCGCTGACGGTCCAGGCCAACTGTACGATTTCCGCCAATGCGCTGTCGT TCGGCACGAACGGCGTGCTCGCGACGGCCGTCAATCAGCAAACGACGCTGTCCGTCTCCTGCTCGAACACGACCTCCTAC AACGTCGGGCTCGACGCGGGCAGCGTGTCCGGCTCGACCGTCTCGAGCCGCCTGCTCGCCGGCACGACGACGGGCAACAC CAGCACGACGGTCGGCTTCCAGCTCTATCAGGACTCGGGCCACGCGACGGTCTGGGGCAACACGGTCGGCACCGACACGG TGAGCGGCACCGGCAACGGCACCGCGCAGACGCTCAACGTGTACGGCCAGGTGCCCGCCCAAACGACGCCGAAACCCGAT ACCTACCAGTCGACCGTCACCGCCACCGTCACGTTCTGA
Upstream 100 bases:
>100_bases TCTTCGGCTTATCGCGCGCTCATTGAATGGCGCGCCTAATAGTTCGACGCTTTCGGCATAACAGCGACAAAAAAACAACC ATAGCTACGGAGCGATTGCG
Downstream 100 bases:
>100_bases ACCGTCCGTGACGACATCCGTGCGCCGCTGGCTGGCCGCGCTCGCCATCGCCGGCGCCGTCGCGCCCGCGAGCGGCGCAA CGCTGCAGATTTCGCCCGTC
Product: spore coat protein U domain-contain protein
Products: NA
Alternate protein names: Signal Peptide Protein; Spore Coat U Domain Protein; Protein U; Spore Coat Protein U; Spore Coat Protein U Domain-Containing; Lipoprotein; Spore Coat Protein U Domain Protein; Spore Coat Protein U Family Protein; Secreted Protein-Like; Exported Lipoprotein
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MHALQRPLLSALAATILVATPSFRPATAATATATFTVSLTVQANCTISANALSFGTNGVLATAVNQQTTLSVSCSNTTSY NVGLDAGSVSGSTVSSRLLAGTTTGNTSTTVGFQLYQDSGHATVWGNTVGTDTVSGTGNGTAQTLNVYGQVPAQTTPKPD TYQSTVTATVTF
Sequences:
>Translated_172_residues MHALQRPLLSALAATILVATPSFRPATAATATATFTVSLTVQANCTISANALSFGTNGVLATAVNQQTTLSVSCSNTTSY NVGLDAGSVSGSTVSSRLLAGTTTGNTSTTVGFQLYQDSGHATVWGNTVGTDTVSGTGNGTAQTLNVYGQVPAQTTPKPD TYQSTVTATVTF >Mature_172_residues MHALQRPLLSALAATILVATPSFRPATAATATATFTVSLTVQANCTISANALSFGTNGVLATAVNQQTTLSVSCSNTTSY NVGLDAGSVSGSTVSSRLLAGTTTGNTSTTVGFQLYQDSGHATVWGNTVGTDTVSGTGNGTAQTLNVYGQVPAQTTPKPD TYQSTVTATVTF
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17318; Mature: 17318
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHALQRPLLSALAATILVATPSFRPATAATATATFTVSLTVQANCTISANALSFGTNGVL CCHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEEEEEEEEECCEEEECEEEECCCCEE ATAVNQQTTLSVSCSNTTSYNVGLDAGSVSGSTVSSRLLAGTTTGNTSTTVGFQLYQDSG EEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCC HATVWGNTVGTDTVSGTGNGTAQTLNVYGQVPAQTTPKPDTYQSTVTATVTF CEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MHALQRPLLSALAATILVATPSFRPATAATATATFTVSLTVQANCTISANALSFGTNGVL CCHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEEEEEEEEECCEEEECEEEECCCCEE ATAVNQQTTLSVSCSNTTSYNVGLDAGSVSGSTVSSRLLAGTTTGNTSTTVGFQLYQDSG EEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCC HATVWGNTVGTDTVSGTGNGTAQTLNVYGQVPAQTTPKPDTYQSTVTATVTF CEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA