| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719102
Identifier: 83719102
GI number: 83719102
Start: 989807
End: 990622
Strand: Reverse
Name: 83719102
Synonym: BTH_I0869
Alternate gene names: NA
Gene position: 990622-989807 (Counterclockwise)
Preceding gene: 83719610
Following gene: 83720848
Centisome position: 26.01
GC content: 72.55
Gene sequence:
>816_bases ATGAGCCGTCCGCCCGCCCCGCCGTCTTCCCTCGATTCCACGCCCGCCCGCGCGCTCGGCGAGTTCATCCGCGCGCATCG CGAGCGGCTGACGCCGCAGGCAGTCGGCCTGCCGCCCGGCCCGCGACGCCGCACGCCCGGGCTGCGCCGCGAGGAAGTCG CGCAGCTCTGCGGCGTGAGTCCGACCTGGTACACGTGGATCGAGCAGGGCCGCGAAGTGTCGGCGTCGGCCGACGCGCTC GCGCGCATCGCGGTCGCGCTGCGGCTGTCGCGCGCCGAGCGCGCGTATCTGTTCGAGCTCGCCGCGCAGCGTGATCCGGC CGAGCCCGAGTTCGCGGCGAGCGACGTGCCGGATACGCTCGTCGCCGCCGTGAAGCTGATCGCGACGCCCGCGTACGTGC TCGACCGCCAATGGAACGCGCTCGCGTGGAACGACGCGGCCGCGGCGCTCTTCACCGGCTGGCTCGACGGCGAGCGCGAC GAGCGCAACCTGCTGCGCTTCACGTTCGCCTCTCCCGCGGCGCGCGCGCTGATCGTCGATTGGGAGACGCGCGCGCGGCG GCTCGTCGCCGAATTCCGCGCGGACACGATCCGCCATCTGAACGACGCGCCCACCCGCGCGCTGATCGATTCGCTGCTCG CAGAAAGCGACGCGTTCGCGCACTACTGGGCGTCGCAGGATGTCGGCGAGCGCGAAGGCGGCGAACGCGCGTTCGACCAT CCGCGCGAAGGCCGCGTCGTCTACCAGCAAATGACGCTCAAGCCCGCGCACCGCGATGACCTGAAGCTCGTCGTGCTGGT TCGGGAAGACGCCTGA
Upstream 100 bases:
>100_bases CCGGTACAAGCCAAGCAATTATCCTGGTATCCGCTCCACCAGCCTGTCGGCCGGAGCGCCGCATTTCCGTTCGTTCTCAC GCATTGCCGATTCGACCCAG
Downstream 100 bases:
>100_bases CGGCGCGAAACCGCGCCTGCCTTCGGCCGCACGCGTACGATCCGCCGCGCCGCGTCCCGCCGCGCGCCGAGCCGGGCCGA GCCGGGCCGAGCCGGGCCGA
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Protein; XRE Family Transcription Regulator Protein; Helix-Turn-Helix Domain Containing Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSRPPAPPSSLDSTPARALGEFIRAHRERLTPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGREVSASADAL ARIAVALRLSRAERAYLFELAAQRDPAEPEFAASDVPDTLVAAVKLIATPAYVLDRQWNALAWNDAAAALFTGWLDGERD ERNLLRFTFASPAARALIVDWETRARRLVAEFRADTIRHLNDAPTRALIDSLLAESDAFAHYWASQDVGEREGGERAFDH PREGRVVYQQMTLKPAHRDDLKLVVLVREDA
Sequences:
>Translated_271_residues MSRPPAPPSSLDSTPARALGEFIRAHRERLTPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGREVSASADAL ARIAVALRLSRAERAYLFELAAQRDPAEPEFAASDVPDTLVAAVKLIATPAYVLDRQWNALAWNDAAAALFTGWLDGERD ERNLLRFTFASPAARALIVDWETRARRLVAEFRADTIRHLNDAPTRALIDSLLAESDAFAHYWASQDVGEREGGERAFDH PREGRVVYQQMTLKPAHRDDLKLVVLVREDA >Mature_270_residues SRPPAPPSSLDSTPARALGEFIRAHRERLTPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGREVSASADALA RIAVALRLSRAERAYLFELAAQRDPAEPEFAASDVPDTLVAAVKLIATPAYVLDRQWNALAWNDAAAALFTGWLDGERDE RNLLRFTFASPAARALIVDWETRARRLVAEFRADTIRHLNDAPTRALIDSLLAESDAFAHYWASQDVGEREGGERAFDHP REGRVVYQQMTLKPAHRDDLKLVVLVREDA
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30236; Mature: 30105
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPPAPPSSLDSTPARALGEFIRAHRERLTPQAVGLPPGPRRRTPGLRREEVAQLCGVS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC PTWYTWIEQGREVSASADALARIAVALRLSRAERAYLFELAAQRDPAEPEFAASDVPDTL CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH VAAVKLIATPAYVLDRQWNALAWNDAAAALFTGWLDGERDERNLLRFTFASPAARALIVD HHHHHHHHCCHHHHHCCCCCEEECHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEE WETRARRLVAEFRADTIRHLNDAPTRALIDSLLAESDAFAHYWASQDVGEREGGERAFDH CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC PREGRVVYQQMTLKPAHRDDLKLVVLVREDA CCCCCEEEEEHHCCCCCCCCCEEEEEEECCC >Mature Secondary Structure SRPPAPPSSLDSTPARALGEFIRAHRERLTPQAVGLPPGPRRRTPGLRREEVAQLCGVS CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC PTWYTWIEQGREVSASADALARIAVALRLSRAERAYLFELAAQRDPAEPEFAASDVPDTL CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH VAAVKLIATPAYVLDRQWNALAWNDAAAALFTGWLDGERDERNLLRFTFASPAARALIVD HHHHHHHHCCHHHHHCCCCCEEECHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEE WETRARRLVAEFRADTIRHLNDAPTRALIDSLLAESDAFAHYWASQDVGEREGGERAFDH CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC PREGRVVYQQMTLKPAHRDDLKLVVLVREDA CCCCCEEEEEHHCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA