Click here to switch to the map view.

The map label for this gene is ygdL [H]

Identifier: 83720758

GI number: 83720758

Start: 827218

End: 828084

Strand: Direct

Name: ygdL [H]

Synonym: BTH_I0718

Alternate gene names: 83720758

Gene position: 827218-828084 (Clockwise)

Preceding gene: 83720505

Following gene: 83718434

Centisome position: 21.72

GC content: 69.55

Gene sequence:

>867_bases
ATGTCTCGCACCGACGCCATTGCGACGCTTCACGATGTTACTCCGCAGCCATCCGGCGAGCTTGACGCGGATCGCGCCCG
GCGCTTCGGCGGCGTCGCCCGGCTGTACGGCGCCAACGCGCTCGCCGCGTTCGAGCGCGCGCGCGTCGCCGTGATCGGCA
TCGGCGGCGTCGGCTCGTGGGCGGCTGAGGCGCTCGCGCGCAGCGCCGTCGGGGAACTGACCCTGATCGATCTCGACAAC
GTCGCCGAAAGCAACACGAACCGGCAGATCCACGCGCTCGACGGCAACTACGGCAAACCGAAGGTCGACGCGATGGCCGA
GCGGATCGCGCTCATCGATTCGGCGTGCCGCGTCGTGAAGATCGAGGATTTCGTCGAGCCGGACAATCTCGATACGCTGC
TCGGCGGCGGCTTCGACTACATCGTCGACGCGATCGACAGCGTGCGCACGAAAGTCGCGCTGATCGCGTGGTGCGTCGCG
CGCGGCCAGCCGCTCGTGACGGTCGGCGGCGCGGGCGGCCAACTCGATCCGACCCGCATCCGGATCGACGATCTCGCGCA
GACGATCCAGGACCCGCTGCTGTCGAAGGTGCGCGCGCAGTTACGCAAGCAGCACGGCTTTGCGCGCGGGCCGAAAGCGA
AATTCAAGGTGAGCGCCGTGTATTCGGACGAGCCGCTGATCTATCCGGAGGCGGCCGTGTGCGACGTCGACGAGGTCGCG
ATGCACGCGGCAACCGACGCGCAGGCGCCGGGGCCCACCGGGCTCAATTGCGCAGGCTTCGGCTCGAGCGTGTGCGTGAC
CGCGAGCTTCGGATTCGCGGCGGCCGCGCATGCGCTGCGCGCGCTCGCCGCGCGGGCGCAGCGGTAA

Upstream 100 bases:

>100_bases
CGAAGGTGGAAAAAACCTGCGTTGCAGTGGTTCGGCGCGTGATTGCCGCCGGTCGATCAGGCAAAATAACGGGCTATCCG
TTTCCTTTCGATCAGCTTGT

Downstream 100 bases:

>100_bases
CGCGCGGGCGGCGAGCACGCCCGTCGCGGCGCGGGTGCGGCCGCGGCTGAGCCGTGCGTGCCGGAACGGCGTTTCCCGGG
AGCGGACGAACGACTCGCGC

Product: HesA/MoeB/ThiF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSRTDAIATLHDVTPQPSGELDADRARRFGGVARLYGANALAAFERARVAVIGIGGVGSWAAEALARSAVGELTLIDLDN
VAESNTNRQIHALDGNYGKPKVDAMAERIALIDSACRVVKIEDFVEPDNLDTLLGGGFDYIVDAIDSVRTKVALIAWCVA
RGQPLVTVGGAGGQLDPTRIRIDDLAQTIQDPLLSKVRAQLRKQHGFARGPKAKFKVSAVYSDEPLIYPEAAVCDVDEVA
MHAATDAQAPGPTGLNCAGFGSSVCVTASFGFAAAAHALRALAARAQR

Sequences:

>Translated_288_residues
MSRTDAIATLHDVTPQPSGELDADRARRFGGVARLYGANALAAFERARVAVIGIGGVGSWAAEALARSAVGELTLIDLDN
VAESNTNRQIHALDGNYGKPKVDAMAERIALIDSACRVVKIEDFVEPDNLDTLLGGGFDYIVDAIDSVRTKVALIAWCVA
RGQPLVTVGGAGGQLDPTRIRIDDLAQTIQDPLLSKVRAQLRKQHGFARGPKAKFKVSAVYSDEPLIYPEAAVCDVDEVA
MHAATDAQAPGPTGLNCAGFGSSVCVTASFGFAAAAHALRALAARAQR
>Mature_287_residues
SRTDAIATLHDVTPQPSGELDADRARRFGGVARLYGANALAAFERARVAVIGIGGVGSWAAEALARSAVGELTLIDLDNV
AESNTNRQIHALDGNYGKPKVDAMAERIALIDSACRVVKIEDFVEPDNLDTLLGGGFDYIVDAIDSVRTKVALIAWCVAR
GQPLVTVGGAGGQLDPTRIRIDDLAQTIQDPLLSKVRAQLRKQHGFARGPKAKFKVSAVYSDEPLIYPEAAVCDVDEVAM
HAATDAQAPGPTGLNCAGFGSSVCVTASFGFAAAAHALRALAARAQR

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=265, Percent_Identity=52.4528301886792, Blast_Score=276, Evalue=1e-75,
Organism=Escherichia coli, GI1787048, Length=125, Percent_Identity=32.8, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI87082356, Length=131, Percent_Identity=32.0610687022901, Blast_Score=61, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6321790, Length=247, Percent_Identity=27.1255060728745, Blast_Score=88, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322825, Length=143, Percent_Identity=34.2657342657343, Blast_Score=81, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24582879, Length=134, Percent_Identity=32.089552238806, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 30248; Mature: 30116

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTDAIATLHDVTPQPSGELDADRARRFGGVARLYGANALAAFERARVAVIGIGGVGSW
CCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHCEEEEEEECCCCHH
AAEALARSAVGELTLIDLDNVAESNTNRQIHALDGNYGKPKVDAMAERIALIDSACRVVK
HHHHHHHHHHCCEEEEECHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEE
IEDFVEPDNLDTLLGGGFDYIVDAIDSVRTKVALIAWCVARGQPLVTVGGAGGQLDPTRI
EHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEE
RIDDLAQTIQDPLLSKVRAQLRKQHGFARGPKAKFKVSAVYSDEPLIYPEAAVCDVDEVA
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEECCCHHHCCHHHHH
MHAATDAQAPGPTGLNCAGFGSSVCVTASFGFAAAAHALRALAARAQR
HHHHCCCCCCCCCCCEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRTDAIATLHDVTPQPSGELDADRARRFGGVARLYGANALAAFERARVAVIGIGGVGSW
CCCHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHCEEEEEEECCCCHH
AAEALARSAVGELTLIDLDNVAESNTNRQIHALDGNYGKPKVDAMAERIALIDSACRVVK
HHHHHHHHHHCCEEEEECHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEE
IEDFVEPDNLDTLLGGGFDYIVDAIDSVRTKVALIAWCVARGQPLVTVGGAGGQLDPTRI
EHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEE
RIDDLAQTIQDPLLSKVRAQLRKQHGFARGPKAKFKVSAVYSDEPLIYPEAAVCDVDEVA
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEECCCHHHCCHHHHH
MHAATDAQAPGPTGLNCAGFGSSVCVTASFGFAAAAHALRALAARAQR
HHHHCCCCCCCCCCCEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]