| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is msrA [H]
Identifier: 83720505
GI number: 83720505
Start: 822489
End: 823322
Strand: Direct
Name: msrA [H]
Synonym: BTH_I0714
Alternate gene names: 83720505
Gene position: 822489-823322 (Clockwise)
Preceding gene: 83718642
Following gene: 83720758
Centisome position: 21.59
GC content: 66.43
Gene sequence:
>834_bases ATGGCGGGAAGTGAGCAGGGCAGTCATCGGAAAATTCGTCGGGTTGGCGACGATTTTAGCGGCAATCGTGCAAGGCTGCG ACGGACCGCCGCGCCCGGCGAGTGGCCGGCGCCACATTTTTCGCGGAACGCCGTGCGCGTCGCGATGCGGCGCGGCCGAC GAAAAGCGCGAAGGCGGCGCGATGCGCGGACGCGGCACAAACCGTGTGCGGCGGCGGCCGGGGCAGGCGCGGCGCGCGGG CCGCACGACGAACGTAACGAACGAAAGGAATCCGATATGAGTGAAGCAACGAACGAAATCGCGACGCTGGGCGGCGGCTG CTTCTGGTGCCAGGAGGCGGTGTTCCTCGACGTCAACGGCGTGACGGCCGTCGAATCGGGCTACGCGGGCGGCCATACGC GCAATCCCGGCTACCGCGACGTGTGCGACGGCGAAACGGGCCACGCGGAGGTCGTCAACGTGACGTTCGACCCGAGCCGG ATCGGCTATCGCGAGATCGTCGAGATTTTTTTCGCGACGCACGATCCGACGCAACTGAACCGGCAGGGCAATGATGTCGG CACGCAATACCGGTCGGTGATCTTCACGCGCTCGGATGCGCAGCGCGACGTCGCGCTCGACGTGATCCGCGCGCTCGAGC GCGACAAGCTGTACGACGCGCCGATCGTCACGCAGGTCGAGCCGCTGAACGACAACTACTGGCCAGCGGAGGCGTATCAC CAGAACTATTACGCGCGCAATCCGGGGCAGGGTTACTGCGCGGTCGTGATCGGCCCGAAGCTCGCGAAGTTCCGGCAGAA GTTCGCGCATCGGCTGAAGTCGCGCGGCGCGTGA
Upstream 100 bases:
>100_bases AAATTTGGCGGGCTGGCCTGTCCGTGTTTCATTGCGTGACGGCCTCGAGCGATGGGCGCGCGCGGCGGCGGGCGGAACGG GCGGCGGCGCCGCGGGCGAA
Downstream 100 bases:
>100_bases CGCGATGCGGAGACGCCCGTGTGCGTCGCGCGGCGTCCTGTTGCGTGATCGCGCGCCGGGCGGGCCTGGACGGCGCGCGT ATCGCCCGCCGGCGGCGGGC
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MAGSEQGSHRKIRRVGDDFSGNRARLRRTAAPGEWPAPHFSRNAVRVAMRRGRRKARRRRDARTRHKPCAAAAGAGAARG PHDERNERKESDMSEATNEIATLGGGCFWCQEAVFLDVNGVTAVESGYAGGHTRNPGYRDVCDGETGHAEVVNVTFDPSR IGYREIVEIFFATHDPTQLNRQGNDVGTQYRSVIFTRSDAQRDVALDVIRALERDKLYDAPIVTQVEPLNDNYWPAEAYH QNYYARNPGQGYCAVVIGPKLAKFRQKFAHRLKSRGA
Sequences:
>Translated_277_residues MAGSEQGSHRKIRRVGDDFSGNRARLRRTAAPGEWPAPHFSRNAVRVAMRRGRRKARRRRDARTRHKPCAAAAGAGAARG PHDERNERKESDMSEATNEIATLGGGCFWCQEAVFLDVNGVTAVESGYAGGHTRNPGYRDVCDGETGHAEVVNVTFDPSR IGYREIVEIFFATHDPTQLNRQGNDVGTQYRSVIFTRSDAQRDVALDVIRALERDKLYDAPIVTQVEPLNDNYWPAEAYH QNYYARNPGQGYCAVVIGPKLAKFRQKFAHRLKSRGA >Mature_276_residues AGSEQGSHRKIRRVGDDFSGNRARLRRTAAPGEWPAPHFSRNAVRVAMRRGRRKARRRRDARTRHKPCAAAAGAGAARGP HDERNERKESDMSEATNEIATLGGGCFWCQEAVFLDVNGVTAVESGYAGGHTRNPGYRDVCDGETGHAEVVNVTFDPSRI GYREIVEIFFATHDPTQLNRQGNDVGTQYRSVIFTRSDAQRDVALDVIRALERDKLYDAPIVTQVEPLNDNYWPAEAYHQ NYYARNPGQGYCAVVIGPKLAKFRQKFAHRLKSRGA
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=178, Percent_Identity=40.4494382022472, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI208609995, Length=178, Percent_Identity=40.4494382022472, Blast_Score=134, Evalue=8e-32, Organism=Homo sapiens, GI208609993, Length=115, Percent_Identity=41.7391304347826, Blast_Score=89, Evalue=4e-18, Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=43.1372549019608, Blast_Score=126, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17533973, Length=151, Percent_Identity=35.7615894039735, Blast_Score=88, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320881, Length=165, Percent_Identity=38.7878787878788, Blast_Score=103, Evalue=3e-23, Organism=Drosophila melanogaster, GI24664627, Length=187, Percent_Identity=32.0855614973262, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI24664631, Length=188, Percent_Identity=31.3829787234043, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI45553131, Length=161, Percent_Identity=31.055900621118, Blast_Score=82, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 30955; Mature: 30824
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSEQGSHRKIRRVGDDFSGNRARLRRTAAPGEWPAPHFSRNAVRVAMRRGRRKARRRR CCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DARTRHKPCAAAAGAGAARGPHDERNERKESDMSEATNEIATLGGGCFWCQEAVFLDVNG HHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEECCEEEEECCC VTAVESGYAGGHTRNPGYRDVCDGETGHAEVVNVTFDPSRIGYREIVEIFFATHDPTQLN CEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHCCHHHHHHHHHCCCCCHHHC RQGNDVGTQYRSVIFTRSDAQRDVALDVIRALERDKLYDAPIVTQVEPLNDNYWPAEAYH CCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHH QNYYARNPGQGYCAVVIGPKLAKFRQKFAHRLKSRGA CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGSEQGSHRKIRRVGDDFSGNRARLRRTAAPGEWPAPHFSRNAVRVAMRRGRRKARRRR CCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DARTRHKPCAAAAGAGAARGPHDERNERKESDMSEATNEIATLGGGCFWCQEAVFLDVNG HHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEECCEEEEECCC VTAVESGYAGGHTRNPGYRDVCDGETGHAEVVNVTFDPSRIGYREIVEIFFATHDPTQLN CEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHCCHHHHHHHHHCCCCCHHHC RQGNDVGTQYRSVIFTRSDAQRDVALDVIRALERDKLYDAPIVTQVEPLNDNYWPAEAYH CCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHH QNYYARNPGQGYCAVVIGPKLAKFRQKFAHRLKSRGA CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]