Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

Click here to switch to the map view.

The map label for this gene is 83720732

Identifier: 83720732

GI number: 83720732

Start: 2340738

End: 2341691

Strand: Direct

Name: 83720732

Synonym: BTH_I2067

Alternate gene names: NA

Gene position: 2340738-2341691 (Clockwise)

Preceding gene: 83721450

Following gene: 83718857

Centisome position: 61.45

GC content: 66.46

Gene sequence:

>954_bases
ATGGCATTCGATCCCAACTATCCACGCGATCTGGTCGGCTACGGCCGACATCCGGTGCAGGCGAACTGGCCGGGCCGCGC
GCGCGTCGCGGTGCAGTTCGTGCTCAACTACGAGGAAGGCGGCGAGAACTGCGTGCTGCACGGCGATCCCGCGTCCGAGC
AGTTCCTGTCCGAGATCGTCGGTGCAGCCGCGTATCCGGCGCGCCACATGAGCATGGAATCGATCTACGAATATGGCTCG
CGCGCGGGCGTGTGGCGCATCCTGCGCGAGTTCGACAAGCGCGGGCTGCCGCTCACGGTATTCGGCGTCGGCATGGCGAT
CGAGCGGCATCCGGAGCTCGCGCGCGCGTTCGTCGAGTTCGGCCACGAGATCGCGTGTCACGGCTGGCGCTGGATTCATT
ATCAGGACATGACGCCCGAGCGCGAAGCCGAGCATATGAAGCTCGGGATGGAGGCGATCGAGCGCGTGACGGGCGTGCGC
CCGCTCGGCTGGTATACGGGCCGCGACAGCCCGAACACGCACCGGCTCGTCGCCGAGTACGGCGGCTTTCTGTACGACTC
CGACCACTACGGCGACGACCTGCCGTTCTGGATGGACGTCGAGGTGCCGGGCGGCGCGCGCGCGCCGCAACTGATCGTCC
CCTATACGCTCGATGCGAACGACATGCGTTTCGCGACGCCGCAAGGCTTCAATACCGCCGATCATTTCTTCCACTATCTG
CGCGATGCGTTCGACGTGCTGTACGAGGAGGGCGACGAGGCGCCGAAGATGATGTCGATCGGCATGCACTGCCGGCTGCT
CGGCCGGCCGGGGCGCTTTCGCGCGCTGCAGCGTTTTCTCGATCACATCGAGCGGCACGATCGCGTATGGGTCGCGCGTC
GCGTCGATATCGCGCGGCACTGGCGCGAGCATCATCCGTATCGGCCGCACGCTCGACGCGAGGGGGACGCATGA

Upstream 100 bases:

>100_bases
CTACACTGGGCCATCCGTCGCATCGGCCGCGCGGCCCCGGTTTCCGGACGCCGCGCGGCCGATGCGAACCCGCTGACGCC
GCATCACTACGCATCCAATC

Downstream 100 bases:

>100_bases
TGAAGGCGATGCGCTACACGCTCGAACAATTGAACGCGATGTCGACGGAGGCGTTCGTCGCGGCGCTGTCCGGGATCTTC
GAGCATTCGCCGTGGGTCGC

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Domain Protein; Hydrolase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MAFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGS
RAGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEFGHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVR
PLGWYTGRDSPNTHRLVAEYGGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYL
RDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARHWREHHPYRPHARREGDA

Sequences:

>Translated_317_residues
MAFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGS
RAGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEFGHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVR
PLGWYTGRDSPNTHRLVAEYGGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYL
RDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARHWREHHPYRPHARREGDA
>Mature_316_residues
AFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIVGAAAYPARHMSMESIYEYGSR
AGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEFGHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVRP
LGWYTGRDSPNTHRLVAEYGGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYLR
DAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARHWREHHPYRPHARREGDA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36702; Mature: 36571

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIV
CCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH
GAAAYPARHMSMESIYEYGSRAGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEF
HHHHCCHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHH
GHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVRPLGWYTGRDSPNTHRLVAEY
CCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHH
GGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYL
CCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHH
RDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARH
HHHHHHHHHCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
WREHHPYRPHARREGDA
HHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFDPNYPRDLVGYGRHPVQANWPGRARVAVQFVLNYEEGGENCVLHGDPASEQFLSEIV
CCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH
GAAAYPARHMSMESIYEYGSRAGVWRILREFDKRGLPLTVFGVGMAIERHPELARAFVEF
HHHHCCHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHH
GHEIACHGWRWIHYQDMTPEREAEHMKLGMEAIERVTGVRPLGWYTGRDSPNTHRLVAEY
CCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHH
GGFLYDSDHYGDDLPFWMDVEVPGGARAPQLIVPYTLDANDMRFATPQGFNTADHFFHYL
CCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHH
RDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVARRVDIARH
HHHHHHHHHCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
WREHHPYRPHARREGDA
HHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA