| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is sir1 [H]
Identifier: 83720632
GI number: 83720632
Start: 928230
End: 929999
Strand: Direct
Name: sir1 [H]
Synonym: BTH_I0814
Alternate gene names: 83720632
Gene position: 928230-929999 (Clockwise)
Preceding gene: 83719248
Following gene: 83721577
Centisome position: 24.37
GC content: 66.38
Gene sequence:
>1770_bases ATGGCCGACTCGGCGCGGACGGTGCAGGATTCGGGCGCGGCGTGGCTAGGACGCCGCGCGGTCATATCGAGCAAACCCTG GGGTCCCCGAATGTACCAGTACGACCAGTACGATCAGACGATCGTCGACGAGCGCGTCGCGCAGTACCGCGACCAGGTCC GCCGCCGCTTGTCCGGCGAATTGAGCGAGGACGAGTTCCGTCCGTTGCGGCTGCAGAACGGCCTGTACATGCAGCGCCAC GCGTACATGCACCGCATCGCGATTCCCTACGGCAATCTCCGCAGCGTCCAGTTGCGCATGCTCGCACGCATCGCGCGCGA GCACGATCGCGGCTACGGCCACTTCTCGACGCGCTCGAACATCCAGTACAACTGGGTGAAGCTCGAGGAAACGCCCGAGA TCCTCGCGAAGCTCGCGTCGGTGCAGATGCACGCGATCCAGACGTCCGGCAACTGCATCCGCAACATCACCGCCGACCAG TTCGCGGGCGTGGCTCAGGATGAGGAGATCGATCCGCGTCCGTGGGCCGAGATCCTGCGCCAATGGTCGACGTTCCATCC CGAATTCGCGTGGCTGCCGCGCAAGTTCAAGATCGCCGTGTCCGGCTCGAAGGCAGACCGCGCGGCCGTGCAGATCCACG ATCTCGGCGTCTACCTGAAGAAGAACGAGGCGGGCGAAGTGGTCGCTAGCATCCTCGCGGGCGGCGGCCTCGGCCGCACG CCGATCGTCGGCGCGATTATCCGCGAGAACCTGCCGTGGCAGCACCTCCTCACCTATTGCGAGGCGGCGCTGCGCGTCTA CAACCGCTTCGGCCGCCGCGACAACCTGTTCAAGGCGCGGATCAAGATCCTCGTGAAGGCGCTGTCGCCTGCGAAGTTCT CGCAGATGGTCGAAGAGGAATGGCAGCATCTGAAGGACGGCCCGTCGACGCTCACGCAAGCCGAAGTCGACCGCGTGTCG CAGTTCTTCCAGCCGCCCGCCTACGAGAAGCTCGCCGACACCGACGCGTCGTTCGAGCAGCATCTGCTCGAGAACCGCGC GTTCGCGCGCTGGGTCGAGCGCAACGTCGCGCCGCACAAGGTGCCGGGGTACGCCGCCGTCACGCTTTCGCTGAAGAACC ATCGCGTCGCGCCCGGCGACGCGAGCGCCGAGCAGATGGAGCAGGTCGCCGACTGGGCCGACGCCTATTCGTTCGGCGAG CTGCGCGTGTCGCACGAGCAGAACCTGATTCTCGCGAACGTGAAGAAGCGCGATCTGTTCGCGGTATGGGAAAAGGCGAA GGCGGCCGGCTTCGCGACGCCGAACGTCGGCCTGCTGACCGACATCATCGCGTGCCCGGGCGGCGACTTCTGCTCGCTCG CGAACGCGAAGTCGATTCCGATCGCGCTCGCGATCCAGCAGCGCTTCGACGATCTCGACTACGTGTACGACCTGGGCGAC GTGTCGCTCAACATCTCGGGCTGCATGAACTCGTGCGGACACCACCACGTCGGCAACATCGGCATTCTCGGCGTCGACAA GGACGGCGCCGAGTGGTATCAGGTGTCGCTCGGCGGCGAGCAGGGCACGGGCGCGGGCGGCGCGCGCCTCGGCCGCGTGA TCGGCCCGTCGTTCTCCGCGGAGGAGGTGCCCGACGTGATCTCGAAGCTGATCGACACGTTCGTCGAGTCGCGCATCGAC GGCGAGCGCTTCATCGACACGTACGATCGCATCGGCATCGCGCCGTTCAAGGAGCGCGTCTACGCGGCGCGCCAGACCGC GCACGCGTAA
Upstream 100 bases:
>100_bases TTTTAGTCGTTTGAAATATAAGGGGAGTTTATTACGATTGCCCCGTGTTTTTCAAATATGGATATCTGTAATCGTCATTT GCACATGACCGGCCGGGCGG
Downstream 100 bases:
>100_bases CCCAGCGTAGAGGAATCTGCAGATGGCTTTGATTATCAAGAATCGCGAAGTGATCGACGACGCGTGGCAGGTCGTGCGCG CGGCCGAAGACGGCACGCTG
Product: sulfite reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MADSARTVQDSGAAWLGRRAVISSKPWGPRMYQYDQYDQTIVDERVAQYRDQVRRRLSGELSEDEFRPLRLQNGLYMQRH AYMHRIAIPYGNLRSVQLRMLARIAREHDRGYGHFSTRSNIQYNWVKLEETPEILAKLASVQMHAIQTSGNCIRNITADQ FAGVAQDEEIDPRPWAEILRQWSTFHPEFAWLPRKFKIAVSGSKADRAAVQIHDLGVYLKKNEAGEVVASILAGGGLGRT PIVGAIIRENLPWQHLLTYCEAALRVYNRFGRRDNLFKARIKILVKALSPAKFSQMVEEEWQHLKDGPSTLTQAEVDRVS QFFQPPAYEKLADTDASFEQHLLENRAFARWVERNVAPHKVPGYAAVTLSLKNHRVAPGDASAEQMEQVADWADAYSFGE LRVSHEQNLILANVKKRDLFAVWEKAKAAGFATPNVGLLTDIIACPGGDFCSLANAKSIPIALAIQQRFDDLDYVYDLGD VSLNISGCMNSCGHHHVGNIGILGVDKDGAEWYQVSLGGEQGTGAGGARLGRVIGPSFSAEEVPDVISKLIDTFVESRID GERFIDTYDRIGIAPFKERVYAARQTAHA
Sequences:
>Translated_589_residues MADSARTVQDSGAAWLGRRAVISSKPWGPRMYQYDQYDQTIVDERVAQYRDQVRRRLSGELSEDEFRPLRLQNGLYMQRH AYMHRIAIPYGNLRSVQLRMLARIAREHDRGYGHFSTRSNIQYNWVKLEETPEILAKLASVQMHAIQTSGNCIRNITADQ FAGVAQDEEIDPRPWAEILRQWSTFHPEFAWLPRKFKIAVSGSKADRAAVQIHDLGVYLKKNEAGEVVASILAGGGLGRT PIVGAIIRENLPWQHLLTYCEAALRVYNRFGRRDNLFKARIKILVKALSPAKFSQMVEEEWQHLKDGPSTLTQAEVDRVS QFFQPPAYEKLADTDASFEQHLLENRAFARWVERNVAPHKVPGYAAVTLSLKNHRVAPGDASAEQMEQVADWADAYSFGE LRVSHEQNLILANVKKRDLFAVWEKAKAAGFATPNVGLLTDIIACPGGDFCSLANAKSIPIALAIQQRFDDLDYVYDLGD VSLNISGCMNSCGHHHVGNIGILGVDKDGAEWYQVSLGGEQGTGAGGARLGRVIGPSFSAEEVPDVISKLIDTFVESRID GERFIDTYDRIGIAPFKERVYAARQTAHA >Mature_588_residues ADSARTVQDSGAAWLGRRAVISSKPWGPRMYQYDQYDQTIVDERVAQYRDQVRRRLSGELSEDEFRPLRLQNGLYMQRHA YMHRIAIPYGNLRSVQLRMLARIAREHDRGYGHFSTRSNIQYNWVKLEETPEILAKLASVQMHAIQTSGNCIRNITADQF AGVAQDEEIDPRPWAEILRQWSTFHPEFAWLPRKFKIAVSGSKADRAAVQIHDLGVYLKKNEAGEVVASILAGGGLGRTP IVGAIIRENLPWQHLLTYCEAALRVYNRFGRRDNLFKARIKILVKALSPAKFSQMVEEEWQHLKDGPSTLTQAEVDRVSQ FFQPPAYEKLADTDASFEQHLLENRAFARWVERNVAPHKVPGYAAVTLSLKNHRVAPGDASAEQMEQVADWADAYSFGEL RVSHEQNLILANVKKRDLFAVWEKAKAAGFATPNVGLLTDIIACPGGDFCSLANAKSIPIALAIQQRFDDLDYVYDLGDV SLNISGCMNSCGHHHVGNIGILGVDKDGAEWYQVSLGGEQGTGAGGARLGRVIGPSFSAEEVPDVISKLIDTFVESRIDG ERFIDTYDRIGIAPFKERVYAARQTAHA
Specific function: This Enzyme Catalyzes The 6-Electron Reduction Of Sulfite To Sulfide. This Is One Of Several Activities Required For The Biosynthesis Of L-Cysteine From Sulfate. [C]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
None
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 [H]
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: =1.8.7.1 [H]
Molecular weight: Translated: 65963; Mature: 65832
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSARTVQDSGAAWLGRRAVISSKPWGPRMYQYDQYDQTIVDERVAQYRDQVRRRLSGE CCCCCCCHHCCCCHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC LSEDEFRPLRLQNGLYMQRHAYMHRIAIPYGNLRSVQLRMLARIAREHDRGYGHFSTRSN CCCCCCCCEECCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC IQYNWVKLEETPEILAKLASVQMHAIQTSGNCIRNITADQFAGVAQDEEIDPRPWAEILR CEEEEEEECCCHHHHHHHHHHHHHEEECCCCHHHCCCHHHHCCCCCCCCCCCCHHHHHHH QWSTFHPEFAWLPRKFKIAVSGSKADRAAVQIHDLGVYLKKNEAGEVVASILAGGGLGRT HHHCCCCCHHCCCCEEEEEECCCCCCHHEEEEEECEEEEECCCHHHHHHHHHHCCCCCCC PIVGAIIRENLPWQHLLTYCEAALRVYNRFGRRDNLFKARIKILVKALSPAKFSQMVEEE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH WQHLKDGPSTLTQAEVDRVSQFFQPPAYEKLADTDASFEQHLLENRAFARWVERNVAPHK HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC VPGYAAVTLSLKNHRVAPGDASAEQMEQVADWADAYSFGELRVSHEQNLILANVKKRDLF CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCHHHHH AVWEKAKAAGFATPNVGLLTDIIACPGGDFCSLANAKSIPIALAIQQRFDDLDYVYDLGD HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCHHHHEECCC VSLNISGCMNSCGHHHVGNIGILGVDKDGAEWYQVSLGGEQGTGAGGARLGRVIGPSFSA CEEEHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCH EEVPDVISKLIDTFVESRIDGERFIDTYDRIGIAPFKERVYAARQTAHA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure ADSARTVQDSGAAWLGRRAVISSKPWGPRMYQYDQYDQTIVDERVAQYRDQVRRRLSGE CCCCCCHHCCCCHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC LSEDEFRPLRLQNGLYMQRHAYMHRIAIPYGNLRSVQLRMLARIAREHDRGYGHFSTRSN CCCCCCCCEECCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC IQYNWVKLEETPEILAKLASVQMHAIQTSGNCIRNITADQFAGVAQDEEIDPRPWAEILR CEEEEEEECCCHHHHHHHHHHHHHEEECCCCHHHCCCHHHHCCCCCCCCCCCCHHHHHHH QWSTFHPEFAWLPRKFKIAVSGSKADRAAVQIHDLGVYLKKNEAGEVVASILAGGGLGRT HHHCCCCCHHCCCCEEEEEECCCCCCHHEEEEEECEEEEECCCHHHHHHHHHHCCCCCCC PIVGAIIRENLPWQHLLTYCEAALRVYNRFGRRDNLFKARIKILVKALSPAKFSQMVEEE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH WQHLKDGPSTLTQAEVDRVSQFFQPPAYEKLADTDASFEQHLLENRAFARWVERNVAPHK HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC VPGYAAVTLSLKNHRVAPGDASAEQMEQVADWADAYSFGELRVSHEQNLILANVKKRDLF CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCHHHHH AVWEKAKAAGFATPNVGLLTDIIACPGGDFCSLANAKSIPIALAIQQRFDDLDYVYDLGD HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCHHHHEECCC VSLNISGCMNSCGHHHVGNIGILGVDKDGAEWYQVSLGGEQGTGAGGARLGRVIGPSFSA CEEEHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCH EEVPDVISKLIDTFVESRIDGERFIDTYDRIGIAPFKERVYAARQTAHA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA