| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is purR [H]
Identifier: 83719248
GI number: 83719248
Start: 924817
End: 925848
Strand: Direct
Name: purR [H]
Synonym: BTH_I0812
Alternate gene names: 83719248
Gene position: 924817-925848 (Clockwise)
Preceding gene: 83719792
Following gene: 83720632
Centisome position: 24.28
GC content: 62.11
Gene sequence:
>1032_bases ATGGGACGCAAGAGTCATTCGCACACGGTGACGCTGAAGGACGTGGCGCGCGAAGCCGAGGTGTCATACCAGACCGTGTC GCGTGCCATCAACGGATACGATGAAATCAGCGCGGAAACGCGCGAGAAGGTGCTCGATGTCTGCCGTCGGCTAGGCTATC GCCCCAACCGCCTGGCGGGCAGTTTGCGATCGAAACGCTCGAATGTCGTGGGCCTCATTGTGTCCGATATCGAAAACGTG TTTTTTGCCGAGGTGGCGAGTGGCGTCGAATCCGAGGCGAGACACAAGGGTTATTCGGTGTTGCTCGCGAATACGGCCGA AGACATTGTGCGCGAACGCGAGGCGGTAGGGCAATTCTTCGAGCGGCGCGTCGACGGGCTGATTCTTGCGCCGAGCGAGG GAGAGCACGATTACCTGCGCACCGAGCTGCCGAAGACGTTTCCAATTGTGGCGGTCAATCGCGAGCTGCGGATTCCGGGC TGCGGCGCGGTGCTGTCCGAAAATGTGCGAGGCGCGCGCACCGCGGTCGAGTATCTGATCGCACGCGGCCATACGCGCAT CGGCGCGATCGTTGGCAGCGCGGGGCTGATGACGTCGCGTGAACGGTTGAAGGGCTTTCGCGCCGCAATGTCCGCGGCGG GCCTGCCGGTCCGCCAGGAGTGGATCGCCGCAGGTGGCGTACGCGCGGACAACGGCCGCGACGGGGCGATCAAAGTGCTC ACGGGTGCGGATCGCCCCACGGCATTGCTGACGTCGAGCCATCGGATCACCGAAGGGGCCATGCAGGCGCTGAACGTTCT AGGCTTGCGCTATGGGCCGGACGTGGAAATCGTAAGCTTCGACAATTTACCGTGGATGGCCTTTCTCGATCCGCCACTAC CCGTGGTCGAGCAACCGACCCGGCGCATCGGGCAGGAAGCCATGCGCATGCTGATACACATGATCGAAGGCACGGGCAAT GCGACGGAAATGCGTTTACAGACTCGCTTTGTCACGCACGTGGGTCAGGATTTAAGCGTCGAAGCAGAATGA
Upstream 100 bases:
>100_bases GCGGTGATCCTGGAGCGGGTGCGCACTGGCCGTCGGACCGGCGCAGGTTGGCGGCGAGATCGGAGTCGGGTATCGTTCTG CGGATAACCAGGAAAGAGTC
Downstream 100 bases:
>100_bases CTCGATGTCCACCCACGTCAGGTCATCGGGCTCGGAAGTAGGTGTTCTGTTTGCCCGCGTATATTTGTGTCGCGCTGATC GGAGTTAATGCGGACTTCCC
Product: ribose operon repressor
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MGRKSHSHTVTLKDVAREAEVSYQTVSRAINGYDEISAETREKVLDVCRRLGYRPNRLAGSLRSKRSNVVGLIVSDIENV FFAEVASGVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEGEHDYLRTELPKTFPIVAVNRELRIPG CGAVLSENVRGARTAVEYLIARGHTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGGVRADNGRDGAIKVL TGADRPTALLTSSHRITEGAMQALNVLGLRYGPDVEIVSFDNLPWMAFLDPPLPVVEQPTRRIGQEAMRMLIHMIEGTGN ATEMRLQTRFVTHVGQDLSVEAE
Sequences:
>Translated_343_residues MGRKSHSHTVTLKDVAREAEVSYQTVSRAINGYDEISAETREKVLDVCRRLGYRPNRLAGSLRSKRSNVVGLIVSDIENV FFAEVASGVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEGEHDYLRTELPKTFPIVAVNRELRIPG CGAVLSENVRGARTAVEYLIARGHTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGGVRADNGRDGAIKVL TGADRPTALLTSSHRITEGAMQALNVLGLRYGPDVEIVSFDNLPWMAFLDPPLPVVEQPTRRIGQEAMRMLIHMIEGTGN ATEMRLQTRFVTHVGQDLSVEAE >Mature_342_residues GRKSHSHTVTLKDVAREAEVSYQTVSRAINGYDEISAETREKVLDVCRRLGYRPNRLAGSLRSKRSNVVGLIVSDIENVF FAEVASGVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEGEHDYLRTELPKTFPIVAVNRELRIPGC GAVLSENVRGARTAVEYLIARGHTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGGVRADNGRDGAIKVLT GADRPTALLTSSHRITEGAMQALNVLGLRYGPDVEIVSFDNLPWMAFLDPPLPVVEQPTRRIGQEAMRMLIHMIEGTGNA TEMRLQTRFVTHVGQDLSVEAE
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790369, Length=320, Percent_Identity=32.8125, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1790194, Length=308, Percent_Identity=33.7662337662338, Blast_Score=166, Evalue=3e-42, Organism=Escherichia coli, GI1787948, Length=307, Percent_Identity=32.5732899022801, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1788474, Length=306, Percent_Identity=29.4117647058824, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1789068, Length=310, Percent_Identity=30.3225806451613, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1786540, Length=314, Percent_Identity=30.2547770700637, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1789202, Length=293, Percent_Identity=29.3515358361775, Blast_Score=121, Evalue=7e-29, Organism=Escherichia coli, GI1787580, Length=329, Percent_Identity=25.531914893617, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787906, Length=309, Percent_Identity=28.4789644012945, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1786268, Length=307, Percent_Identity=27.3615635179153, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1790715, Length=333, Percent_Identity=25.2252252252252, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI48994940, Length=325, Percent_Identity=27.0769230769231, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790689, Length=310, Percent_Identity=24.5161290322581, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37597; Mature: 37466
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKSHSHTVTLKDVAREAEVSYQTVSRAINGYDEISAETREKVLDVCRRLGYRPNRLAG CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH SLRSKRSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTAEDIVREREAVGQFF HHHHHCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHH ERRVDGLILAPSEGEHDYLRTELPKTFPIVAVNRELRIPGCGAVLSENVRGARTAVEYLI HHHHCCEEECCCCCCCHHHHHCCCCCCCEEEECCEECCCCCHHHHHCCCCHHHHHHHHHH ARGHTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGGVRADNGRDGAIKVL HCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCCCCEEEEE TGADRPTALLTSSHRITEGAMQALNVLGLRYGPDVEIVSFDNLPWMAFLDPPLPVVEQPT ECCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCHH RRIGQEAMRMLIHMIEGTGNATEMRLQTRFVTHVGQDLSVEAE HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECCC >Mature Secondary Structure GRKSHSHTVTLKDVAREAEVSYQTVSRAINGYDEISAETREKVLDVCRRLGYRPNRLAG CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH SLRSKRSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTAEDIVREREAVGQFF HHHHHCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHH ERRVDGLILAPSEGEHDYLRTELPKTFPIVAVNRELRIPGCGAVLSENVRGARTAVEYLI HHHHCCEEECCCCCCCHHHHHCCCCCCCEEEECCEECCCCCHHHHHCCCCHHHHHHHHHH ARGHTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGGVRADNGRDGAIKVL HCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCCCCEEEEE TGADRPTALLTSSHRITEGAMQALNVLGLRYGPDVEIVSFDNLPWMAFLDPPLPVVEQPT ECCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCHH RRIGQEAMRMLIHMIEGTGNATEMRLQTRFVTHVGQDLSVEAE HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA