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The map label for this gene is rbsB [C]

Identifier: 83720522

GI number: 83720522

Start: 3013239

End: 3014288

Strand: Direct

Name: rbsB [C]

Synonym: BTH_I2644

Alternate gene names: 83720522

Gene position: 3013239-3014288 (Clockwise)

Preceding gene: 83720234

Following gene: 83720982

Centisome position: 79.1

GC content: 65.9

Gene sequence:

>1050_bases
ATGAGACTTTGCACTGGCAAGGCCGTCCTGCGCGCGTGCGTCGCCGCGATCGCCGTCGCGGCGGGCGTGGGCGGCGCGGC
CCCGGCAGCCCAGGCGGCGGGCGCGCGCTTCGCGCTCATCAGCCACGCGCCCGATTCCGATTCGTGGTGGAACACGATCA
AGAACGCGATCAAGCAGGCGGACGAGGACTTCGACGTCACGACCGACTACCGCAATCCGCCGAACGGCGACATCGCCGAC
ATGGCGCGCCTGATCGAGCAGTCGGCCGCGCGCGACTACGACGGCGTGATCACGACGATCGCCGATTACGACGTGCTGAA
GAATTCGCTGAAGAAGGTCACCGCGAAGAAGATTCCGCTCGTAACGATCAACTCCGGCACCGAGGAACAGAGCGCGCAAC
TCGGCGCGATCATGCACGTCGGCCAGCCCGAGTACGTCGCGGGTCACGCGGCGGGCGAGAAGGCGAAGGCGGCCGGCGTG
AAGAGCTTCCTCTGCGTGAACCACATCGCGACCAACAGCGTGTCGTTCGACCGCTGCCGCGGCTTCGCCGACGCGATCGG
CGCCGACTACAAGAGCTCGACGATCGACTCCGGCCAGGACCCGACCGAGATCCAGTCGAAGGTGAGCGCGTACCTGCGCA
ACCACCCGAACACGCAGGCGATCCTCACGCTCGGCCCGGTGCCCGCCGCGGCAACGCTGAAGGCGGTCCAGCAGATGGGC
CTCACGAACAAGCTGTTCTTCGCGACGTTCGATTTCTCCGACGACATCGCGAAGGCGATCCAGAGCGGCGCGATCAAGTT
CGCGATCGACCAGCAGCCGTACCTGCAGGGCTACATCCCGGTGGCCGTGCTCGCGATCGCGAAGCAGAACAAGACCACCG
ATCCCGTGAAGATCCGCCAGATCCTCGAGGCGAATCCGAAGTTCCAGGCGCGGCTCGCGACATACGGGCTGCAGCCGTCG
TACGGGCCGAAGAACATCCGCTCGGGCCCGGGCTTCATCACGAAGGAGAACCTCGACAAGGTGATCAAGTACGCGGGCCA
GTACCGCTAA

Upstream 100 bases:

>100_bases
AAATTTTCTTTGCAATTCGTAGCGAGTTGACCTAACCTTGCTCGTGAACGCGGCCCGACCTGCGTTCGCCCGAAAACGAC
AGACAGAGAAAGGTGGAGAC

Downstream 100 bases:

>100_bases
CGTTCATCGCATCGATTCGCACGACGCGCGGGCGCTCGTCCGCGCGCTTTACCGGCGCAGCGGAGCGAACGCGCCGCGCG
CCGGGCATCAAGGAGACATC

Product: sugar ABC transporter periplasmic sugar-binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: ABC-Type Sugar Transport System; Sugar ABC Transporter Periplasmic Component-Like Protein; Twin-Arginine Translocation Pathway Signal; ABC Transporter; Sugar ABC Transporter Periplasmic Protein; Lipoprotein

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MRLCTGKAVLRACVAAIAVAAGVGGAAPAAQAAGARFALISHAPDSDSWWNTIKNAIKQADEDFDVTTDYRNPPNGDIAD
MARLIEQSAARDYDGVITTIADYDVLKNSLKKVTAKKIPLVTINSGTEEQSAQLGAIMHVGQPEYVAGHAAGEKAKAAGV
KSFLCVNHIATNSVSFDRCRGFADAIGADYKSSTIDSGQDPTEIQSKVSAYLRNHPNTQAILTLGPVPAAATLKAVQQMG
LTNKLFFATFDFSDDIAKAIQSGAIKFAIDQQPYLQGYIPVAVLAIAKQNKTTDPVKIRQILEANPKFQARLATYGLQPS
YGPKNIRSGPGFITKENLDKVIKYAGQYR

Sequences:

>Translated_349_residues
MRLCTGKAVLRACVAAIAVAAGVGGAAPAAQAAGARFALISHAPDSDSWWNTIKNAIKQADEDFDVTTDYRNPPNGDIAD
MARLIEQSAARDYDGVITTIADYDVLKNSLKKVTAKKIPLVTINSGTEEQSAQLGAIMHVGQPEYVAGHAAGEKAKAAGV
KSFLCVNHIATNSVSFDRCRGFADAIGADYKSSTIDSGQDPTEIQSKVSAYLRNHPNTQAILTLGPVPAAATLKAVQQMG
LTNKLFFATFDFSDDIAKAIQSGAIKFAIDQQPYLQGYIPVAVLAIAKQNKTTDPVKIRQILEANPKFQARLATYGLQPS
YGPKNIRSGPGFITKENLDKVIKYAGQYR
>Mature_349_residues
MRLCTGKAVLRACVAAIAVAAGVGGAAPAAQAAGARFALISHAPDSDSWWNTIKNAIKQADEDFDVTTDYRNPPNGDIAD
MARLIEQSAARDYDGVITTIADYDVLKNSLKKVTAKKIPLVTINSGTEEQSAQLGAIMHVGQPEYVAGHAAGEKAKAAGV
KSFLCVNHIATNSVSFDRCRGFADAIGADYKSSTIDSGQDPTEIQSKVSAYLRNHPNTQAILTLGPVPAAATLKAVQQMG
LTNKLFFATFDFSDDIAKAIQSGAIKFAIDQQPYLQGYIPVAVLAIAKQNKTTDPVKIRQILEANPKFQARLATYGLQPS
YGPKNIRSGPGFITKENLDKVIKYAGQYR

Specific function: Involved In The High-Affinity D-Ribose Membrane Transport System And Also Serves As The Primary Chemoreceptor For Chemotaxis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37263; Mature: 37263

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLCTGKAVLRACVAAIAVAAGVGGAAPAAQAAGARFALISHAPDSDSWWNTIKNAIKQA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHC
DEDFDVTTDYRNPPNGDIADMARLIEQSAARDYDGVITTIADYDVLKNSLKKVTAKKIPL
CCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCE
VTINSGTEEQSAQLGAIMHVGQPEYVAGHAAGEKAKAAGVKSFLCVNHIATNSVSFDRCR
EEECCCCCHHHHHHHHHEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
GFADAIGADYKSSTIDSGQDPTEIQSKVSAYLRNHPNTQAILTLGPVPAAATLKAVQQMG
CHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCC
LTNKLFFATFDFSDDIAKAIQSGAIKFAIDQQPYLQGYIPVAVLAIAKQNKTTDPVKIRQ
CCCEEEEEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
ILEANPKFQARLATYGLQPSYGPKNIRSGPGFITKENLDKVIKYAGQYR
HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLCTGKAVLRACVAAIAVAAGVGGAAPAAQAAGARFALISHAPDSDSWWNTIKNAIKQA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHC
DEDFDVTTDYRNPPNGDIADMARLIEQSAARDYDGVITTIADYDVLKNSLKKVTAKKIPL
CCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCE
VTINSGTEEQSAQLGAIMHVGQPEYVAGHAAGEKAKAAGVKSFLCVNHIATNSVSFDRCR
EEECCCCCHHHHHHHHHEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
GFADAIGADYKSSTIDSGQDPTEIQSKVSAYLRNHPNTQAILTLGPVPAAATLKAVQQMG
CHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCC
LTNKLFFATFDFSDDIAKAIQSGAIKFAIDQQPYLQGYIPVAVLAIAKQNKTTDPVKIRQ
CCCEEEEEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
ILEANPKFQARLATYGLQPSYGPKNIRSGPGFITKENLDKVIKYAGQYR
HHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA