| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is argH [H]
Identifier: 83720476
GI number: 83720476
Start: 982797
End: 984206
Strand: Reverse
Name: argH [H]
Synonym: BTH_I0864
Alternate gene names: 83720476
Gene position: 984206-982797 (Counterclockwise)
Preceding gene: 83718580
Following gene: 83721583
Centisome position: 25.84
GC content: 68.01
Gene sequence:
>1410_bases ATGACGTCCCAACTGCACAAAAAGGGCGAGGCCTGGTCGGCCCGCTTTTCGGAACCGATGTCCGAGCTCGTCAAGCGCTA CACGTCGTCGGTTTTCTTCGACAAGCGGCTCGCGCTCGTCGACATCGCCGGCTCGCTCGCGCACGCGGGCATGCTCGCCG CGCAGAAGATCATCAGCGCCGACGACCTCGCCGCGATCGAGCACGGGATGGCGCAAATCAAGGGCGAGATCGAGCGCGGC GAATTCGAATGGCAGCTCGATCTCGAAGACGTGCACCTGAACATCGAGGCGCGCCTGACCGCGCTCATCGGCGACGCGGG CAAGCGCCTGCACACGGGCCGCTCGCGCAACGACCAGGTCGCGACCGACATCCGCCTGTGGCTGCGCGGCGAGATCGACC GGATCGGCGGCCTGCTGAACGACCTGCGCGGCGCGCTGATCGATCTCGCCGAACAGAACGCGGACACGATCCTGCCGGGC TTCACGCACCTGCAGGTCGCGCAGCCCGTCACGTTCGGCCATCACCTGCTCGCGTACGTCGAGATGTTCTCGCGCGACGC CGAGCGCATGCGCGACTGCCGCGCGCGCGTGAACCGCCTGCCGCTCGGCGCGGCGGCGCTCGCGGGCACGAGCTATCCGA TCGACCGCCATGCGGTGGCGAAGACGCTCGGCTTCGACGGCATCTGCGCGAACTCGCTCGACGCGGTGTCCGATCGCGAC TTCGCGATCGAATTCACGGCCGCGGCCGCGCTGGTCATGACGCACGTGTCGCGCTTCTCGGAAGAACTCGTGCTGTGGAT GAGCCCGCGCGTCGGCTTCATCGACATCGCCGACCGCTTCTGCACCGGCAGCTCGATCATGCCGCAGAAGAAGAACCCGG ACGTGCCCGAGCTCGCGCGCGGCAAGACGGGCCGCGTGAACGGCCACCTGATGGCGCTCCTCACGCTGATGAAGGGCCAG CCGCTCGCGTACAACAAGGACAACCAGGAAGACAAGGAACCGCTGTTCGACACGGTCGACACCGTCGCCGACACGCTGCG GATCTTCGCGGAGATGGTCGCGGGCATCACCGTGAAGCCGGACGCGATGCGCGCGGCCGCGCTGCAGGGCTTCTCGACCG CGACGGATCTCGCCGACTATCTGGTCAAGCGCGGGCTGCCGTTCCGCGACGCGCACGAAGCGGTCGCGCACGCGGTGAAG ATCTGCGACGCGCGCGGCATCGATCTCGCGGACCTGACGCTCGACGAAATGAAGCAGGAACTGCCGAACGTCGCGCATCT GATCGGCAGCGACGTGTTCGACTATCTGACACTCGAAGGCTCGGTTGCGAGCCGCAGCCATCCGGGCGGCACCGCGCCTG ACCAGGTGCGCGCGGCGGCGAAGGCGGCGCGCGCGGCGCTCGGCAAGTAA
Upstream 100 bases:
>100_bases GCCGCGGCCCTGCCTGCGGCGGCCGGCCGCCCGTCGAATGCTAGAATCCGCGTTGTCCGTTCGCGGCGCGCGCCGCTCCA CTCCCCTTCTAAGAATCGCC
Downstream 100 bases:
>100_bases GCCGCCGCAGCGCCCGCCTCACGGACAGCCCCATGTTTTCAGCGGCGATCTTCGATATGGACGGCCTGCTCGTCGATTCC GAGCGGACCATCATGAACGC
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIAGSLAHAGMLAAQKIISADDLAAIEHGMAQIKGEIERG EFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGGLLNDLRGALIDLAEQNADTILPG FTHLQVAQPVTFGHHLLAYVEMFSRDAERMRDCRARVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRD FAIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLMALLTLMKGQ PLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKPDAMRAAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVK ICDARGIDLADLTLDEMKQELPNVAHLIGSDVFDYLTLEGSVASRSHPGGTAPDQVRAAAKAARAALGK
Sequences:
>Translated_469_residues MTSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIAGSLAHAGMLAAQKIISADDLAAIEHGMAQIKGEIERG EFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGGLLNDLRGALIDLAEQNADTILPG FTHLQVAQPVTFGHHLLAYVEMFSRDAERMRDCRARVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRD FAIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLMALLTLMKGQ PLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKPDAMRAAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVK ICDARGIDLADLTLDEMKQELPNVAHLIGSDVFDYLTLEGSVASRSHPGGTAPDQVRAAAKAARAALGK >Mature_468_residues TSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIAGSLAHAGMLAAQKIISADDLAAIEHGMAQIKGEIERGE FEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGGLLNDLRGALIDLAEQNADTILPGF THLQVAQPVTFGHHLLAYVEMFSRDAERMRDCRARVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRDF AIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLMALLTLMKGQP LAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKPDAMRAAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVKI CDARGIDLADLTLDEMKQELPNVAHLIGSDVFDYLTLEGSVASRSHPGGTAPDQVRAAAKAARAALGK
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=461, Percent_Identity=39.9132321041215, Blast_Score=352, Evalue=6e-97, Organism=Homo sapiens, GI68303542, Length=461, Percent_Identity=39.9132321041215, Blast_Score=352, Evalue=6e-97, Organism=Homo sapiens, GI68303547, Length=461, Percent_Identity=37.7440347071584, Blast_Score=322, Evalue=6e-88, Organism=Homo sapiens, GI68303549, Length=461, Percent_Identity=37.527114967462, Blast_Score=313, Evalue=3e-85, Organism=Escherichia coli, GI1790398, Length=458, Percent_Identity=44.7598253275109, Blast_Score=397, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6321806, Length=448, Percent_Identity=41.0714285714286, Blast_Score=334, Evalue=2e-92, Organism=Drosophila melanogaster, GI221473854, Length=457, Percent_Identity=38.074398249453, Blast_Score=305, Evalue=3e-83, Organism=Drosophila melanogaster, GI78706858, Length=457, Percent_Identity=38.074398249453, Blast_Score=305, Evalue=3e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 51100; Mature: 50969
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIAGSLAHAGMLAAQKIISA CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH DDLAAIEHGMAQIKGEIERGEFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQV HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCCH ATDIRLWLRGEIDRIGGLLNDLRGALIDLAEQNADTILPGFTHLQVAQPVTFGHHLLAYV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHH EMFSRDAERMRDCRARVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRD HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHCCCCCC FAIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELAR EEEEHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCHHHC GKTGRVNGHLMALLTLMKGQPLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKP CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DAMRAAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVKICDARGIDLADLTLDEMKQE HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHH LPNVAHLIGSDVFDYLTLEGSVASRSHPGGTAPDQVRAAAKAARAALGK HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIAGSLAHAGMLAAQKIISA CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH DDLAAIEHGMAQIKGEIERGEFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQV HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCCH ATDIRLWLRGEIDRIGGLLNDLRGALIDLAEQNADTILPGFTHLQVAQPVTFGHHLLAYV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHH EMFSRDAERMRDCRARVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRD HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHCCCCCC FAIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELAR EEEEHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCHHHC GKTGRVNGHLMALLTLMKGQPLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKP CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DAMRAAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVKICDARGIDLADLTLDEMKQE HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHH LPNVAHLIGSDVFDYLTLEGSVASRSHPGGTAPDQVRAAAKAARAALGK HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA