| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is mhpR [H]
Identifier: 83720436
GI number: 83720436
Start: 3292820
End: 3293740
Strand: Direct
Name: mhpR [H]
Synonym: BTH_I2865
Alternate gene names: 83720436
Gene position: 3292820-3293740 (Clockwise)
Preceding gene: 83719050
Following gene: 83719275
Centisome position: 86.44
GC content: 65.47
Gene sequence:
>921_bases GTGAAAGAAAGTGGCAAAACGCGCACACTTTTCCGCATTCGTCTTACAATTGATAAAAATCTGAAATCAAGTTTCGAAAA AAGAGAGATTTCCGTGACGACACGCACCAATGCCCAAGCCGTCTCCCGAGAACGGGAAGCGACCACCGATGAAATCACGG CCCTCGCGCGCGGTTTGGCCGTCCTGCGCCGCATCGCGACCTCCGATGCGCCAGTCAGCAACCGGGAACTGGCGGAATTG ACAGGTATCCCAAAGCCAACTGTCTCGCGCATCACGGCGACGCTCGTCAGCGCAGGCTTCCTGTTCCAGTTGCCCGACAG CGAGCGCTTCGTGCTGACGGCGTCGGTGCTCGAACTCAGCAACGGCTTCCTGCGCAACTTCGATATCCGCGCACGCTCGC GGCCATTCCTCGTCGAACTGGCCGAAAAGACGTCGCTGTCCGTCCATCTCGCGGTGCGCGACCGCCTCGACATGGTCGCG ATCGACGTGATCCGCCCCCGCTCGGCCGTGCTCGTCACGCGGCTCGAAACGGGCTCGCGGATGGACATCGCGCGCACGGC GGTCGGCCGTGCGTACCTCGCCGCGCTCGAGGACGACGCGCGCCGCGAGCTGATCGGCGCACTGCAGGCCGCGGCGGGCG ACGACTGGCCGTTCGTCGTATCGCGGCTGAATGCCGCGCTCGCCGACATCGCGCAACACGGCTACGCGATCGCGATCGGC GAATGGCGCGAAGAACTGAATGCGATCGCGGCGGGCTTCGTCGCGCCGACGGGCCAATGCTACGCGGTCAATTGCGGCGG CTCCGCGCACCAGTGCACGCCCGACTTCCTGCGCTCGGTCGCGGTGCCCGCGCTGCGCGAGTGCATCGCAAAGATCACGC GCGAGATCGGCGCCGCCGCGTGGCCGAATCGCGCCCGGTGA
Upstream 100 bases:
>100_bases CAAGTCAAGCGAAAAATACATGTCCCCACATCATTTCCGGCGCTGCGCGATCCGACATCTCCCTAATAAACTCGGGGTAA GCCAGTAAATATTGCGCATT
Downstream 100 bases:
>100_bases AATAGCGCAGCGCGCCGGCCCGCGCCGTTCGGCGTGCCGGCCCGCTGGCGGCGCTCGCCCTTCGCCCGGAGCCCCTCACC GCAACCCACGCCGCCACACA
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MKESGKTRTLFRIRLTIDKNLKSSFEKREISVTTRTNAQAVSREREATTDEITALARGLAVLRRIATSDAPVSNRELAEL TGIPKPTVSRITATLVSAGFLFQLPDSERFVLTASVLELSNGFLRNFDIRARSRPFLVELAEKTSLSVHLAVRDRLDMVA IDVIRPRSAVLVTRLETGSRMDIARTAVGRAYLAALEDDARRELIGALQAAAGDDWPFVVSRLNAALADIAQHGYAIAIG EWREELNAIAAGFVAPTGQCYAVNCGGSAHQCTPDFLRSVAVPALRECIAKITREIGAAAWPNRAR
Sequences:
>Translated_306_residues MKESGKTRTLFRIRLTIDKNLKSSFEKREISVTTRTNAQAVSREREATTDEITALARGLAVLRRIATSDAPVSNRELAEL TGIPKPTVSRITATLVSAGFLFQLPDSERFVLTASVLELSNGFLRNFDIRARSRPFLVELAEKTSLSVHLAVRDRLDMVA IDVIRPRSAVLVTRLETGSRMDIARTAVGRAYLAALEDDARRELIGALQAAAGDDWPFVVSRLNAALADIAQHGYAIAIG EWREELNAIAAGFVAPTGQCYAVNCGGSAHQCTPDFLRSVAVPALRECIAKITREIGAAAWPNRAR >Mature_306_residues MKESGKTRTLFRIRLTIDKNLKSSFEKREISVTTRTNAQAVSREREATTDEITALARGLAVLRRIATSDAPVSNRELAEL TGIPKPTVSRITATLVSAGFLFQLPDSERFVLTASVLELSNGFLRNFDIRARSRPFLVELAEKTSLSVHLAVRDRLDMVA IDVIRPRSAVLVTRLETGSRMDIARTAVGRAYLAALEDDARRELIGALQAAAGDDWPFVVSRLNAALADIAQHGYAIAIG EWREELNAIAAGFVAPTGQCYAVNCGGSAHQCTPDFLRSVAVPALRECIAKITREIGAAAWPNRAR
Specific function: Activator of the mhpRABCDEF operon coding for components of the 3-hydroxyphenylpropionate degradation pathway [H]
COG id: COG1414
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]
Homologues:
Organism=Escherichia coli, GI145693096, Length=254, Percent_Identity=27.5590551181102, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI87082359, Length=159, Percent_Identity=28.3018867924528, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786468, Length=215, Percent_Identity=25.1162790697674, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788581, Length=253, Percent_Identity=26.4822134387352, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014757 - InterPro: IPR005471 - InterPro: IPR011991 [H]
Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]
EC number: NA
Molecular weight: Translated: 33399; Mature: 33399
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESGKTRTLFRIRLTIDKNLKSSFEKREISVTTRTNAQAVSREREATTDEITALARGLA CCCCCCCEEEEEEEEEECCCHHHHHHHHEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHH VLRRIATSDAPVSNRELAELTGIPKPTVSRITATLVSAGFLFQLPDSERFVLTASVLELS HHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCEEEEHHHHHHC NGFLRNFDIRARSRPFLVELAEKTSLSVHLAVRDRLDMVAIDVIRPRSAVLVTRLETGSR CCHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCC MDIARTAVGRAYLAALEDDARRELIGALQAAAGDDWPFVVSRLNAALADIAQHGYAIAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEH EWREELNAIAAGFVAPTGQCYAVNCGGSAHQCTPDFLRSVAVPALRECIAKITREIGAAA HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC WPNRAR CCCCCC >Mature Secondary Structure MKESGKTRTLFRIRLTIDKNLKSSFEKREISVTTRTNAQAVSREREATTDEITALARGLA CCCCCCCEEEEEEEEEECCCHHHHHHHHEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHH VLRRIATSDAPVSNRELAELTGIPKPTVSRITATLVSAGFLFQLPDSERFVLTASVLELS HHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCEEEEHHHHHHC NGFLRNFDIRARSRPFLVELAEKTSLSVHLAVRDRLDMVAIDVIRPRSAVLVTRLETGSR CCHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCC MDIARTAVGRAYLAALEDDARRELIGALQAAAGDDWPFVVSRLNAALADIAQHGYAIAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEH EWREELNAIAAGFVAPTGQCYAVNCGGSAHQCTPDFLRSVAVPALRECIAKITREIGAAA HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC WPNRAR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]