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The map label for this gene is ydfM [H]

Identifier: 83720388

GI number: 83720388

Start: 3596237

End: 3597493

Strand: Reverse

Name: ydfM [H]

Synonym: BTH_I3154

Alternate gene names: 83720388

Gene position: 3597493-3596237 (Counterclockwise)

Preceding gene: 83721381

Following gene: 83720801

Centisome position: 94.44

GC content: 65.0

Gene sequence:

>1257_bases
TTGCGGCCGCGCGCTTTCAAGTTCGGCTTGATAGAATTGCGTCTCCATCGCCGCATTCGATATTTCATGTCTACATTTTC
AAACGGCGACCTGGCATCGGAAAAGCAGGTCGTCGCCCGCAAGAGCACGTTTGTCAGTATCGTCCTCAACGTGATTCTGG
CGACGCTGCAGGTGGTTGTCGGTGTAATTGCGCATTCCCAGGCTTTGATTGCCGATGGCGTCCACTCTTTGTCGGATTTG
GTTTCAGATTTTGTGGTACTGCTCGCCAACCGGCATAGCGGCGCAAAACCGGACGCCGACCACAATTACGGTCACAGTCG
TTATGAAACGGTTGCTTCATTCTTTCTCGGCGCGATCCTGATCGCAGTCGGCGTCGGAATGCTGTGGCGCGCGGGCGACC
GGCTCGTGCATCTCGAAGACATCCCGCCCGTCCATGCGAGCGCGCTCGCGGTCGCGGTGGTCGTGCTGCTGTCGAAGGAG
GGGCTGTTCCGCTACATGCTGCGCGAAGCCCAGCGCGTGCGCTCGGCGATGCTCGTCGCGAACGCCTGGCACGCGCGCTC
GGACGCTGCGTCGTCGCTCGTCGTCGCGATCGGTATCATCGGCAGCCTTGCCGGCGTGCGCCTGCTCGACCCGATCGCCG
CGGCGATCGTCGGCTTCATGGTCGCCCGGATGGGCTGGACGTTCGGCTGGGACGCGCTGCAGGATCTGTCGGACCGCGCG
CTCGACGAGAACGCGTCCGCCGAGATTCGCGCGCTCATCGTATCGACGCCCGGCGTGCGCGACGTGCACGATCTGCGCAC
GCGCAAGATGGGCGATTCGGCGCTCGTCGATGCGCACATCCTCGTCGATCCGATGATGTCCGTCTCCGAGGGGCATTACA
TCGCGGAGGCCGCGCGGGCGCGCGCGCTCACCGACCGGCGCGTGCTCGACGCGCTGATTCACGTCGATCCCGAGCACGAC
GTCGCGCGCCGCACGGTGCTTGATCTGCCGCCGCGCGATCAGATAGAGGGGCAGATCGAGGCGGTGCTCGAAAGGGCGGG
GCTAAGGGCGAGCGCGATCAACCTGCACTACCTGAGCACGGGACTCGAAATCGACATCACGCTTGCGCCGGATGCAAGCG
GGGATCGGGAGGGCGGCAGCGATCCGGCCGCTCGTTTGGACATCGAAGCATTGAAGCAGCAGTTCGGCGCGCGACGCCTC
GGCGTTTCGCGCGCACTCGCGTCGAGCGACGCGGCGGCGGTCGGCCGGCCGCTCTGA

Upstream 100 bases:

>100_bases
GGCCGCCGCGCCCGGCATTTGTCATGAAAATGTCATGTTTAGCGGTAAATGAAAATGCGTTGCGTTTTCATAAGCGATTG
ATTTTGCTTGTTTTTTTGGT

Downstream 100 bases:

>100_bases
CCGGGGTCGGCGCGACGCGCGCACGCGCCGCGACACGTGCCGCACGGCGCGGGGGGGCATCGCAGGCGCTGCTGAAATGC
GGAGACGACGCGCGCACGCG

Product: cation efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MRPRAFKFGLIELRLHRRIRYFMSTFSNGDLASEKQVVARKSTFVSIVLNVILATLQVVVGVIAHSQALIADGVHSLSDL
VSDFVVLLANRHSGAKPDADHNYGHSRYETVASFFLGAILIAVGVGMLWRAGDRLVHLEDIPPVHASALAVAVVVLLSKE
GLFRYMLREAQRVRSAMLVANAWHARSDAASSLVVAIGIIGSLAGVRLLDPIAAAIVGFMVARMGWTFGWDALQDLSDRA
LDENASAEIRALIVSTPGVRDVHDLRTRKMGDSALVDAHILVDPMMSVSEGHYIAEAARARALTDRRVLDALIHVDPEHD
VARRTVLDLPPRDQIEGQIEAVLERAGLRASAINLHYLSTGLEIDITLAPDASGDREGGSDPAARLDIEALKQQFGARRL
GVSRALASSDAAAVGRPL

Sequences:

>Translated_418_residues
MRPRAFKFGLIELRLHRRIRYFMSTFSNGDLASEKQVVARKSTFVSIVLNVILATLQVVVGVIAHSQALIADGVHSLSDL
VSDFVVLLANRHSGAKPDADHNYGHSRYETVASFFLGAILIAVGVGMLWRAGDRLVHLEDIPPVHASALAVAVVVLLSKE
GLFRYMLREAQRVRSAMLVANAWHARSDAASSLVVAIGIIGSLAGVRLLDPIAAAIVGFMVARMGWTFGWDALQDLSDRA
LDENASAEIRALIVSTPGVRDVHDLRTRKMGDSALVDAHILVDPMMSVSEGHYIAEAARARALTDRRVLDALIHVDPEHD
VARRTVLDLPPRDQIEGQIEAVLERAGLRASAINLHYLSTGLEIDITLAPDASGDREGGSDPAARLDIEALKQQFGARRL
GVSRALASSDAAAVGRPL
>Mature_418_residues
MRPRAFKFGLIELRLHRRIRYFMSTFSNGDLASEKQVVARKSTFVSIVLNVILATLQVVVGVIAHSQALIADGVHSLSDL
VSDFVVLLANRHSGAKPDADHNYGHSRYETVASFFLGAILIAVGVGMLWRAGDRLVHLEDIPPVHASALAVAVVVLLSKE
GLFRYMLREAQRVRSAMLVANAWHARSDAASSLVVAIGIIGSLAGVRLLDPIAAAIVGFMVARMGWTFGWDALQDLSDRA
LDENASAEIRALIVSTPGVRDVHDLRTRKMGDSALVDAHILVDPMMSVSEGHYIAEAARARALTDRRVLDALIHVDPEHD
VARRTVLDLPPRDQIEGQIEAVLERAGLRASAINLHYLSTGLEIDITLAPDASGDREGGSDPAARLDIEALKQQFGARRL
GVSRALASSDAAAVGRPL

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=263, Percent_Identity=26.9961977186312, Blast_Score=83, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6325032, Length=223, Percent_Identity=29.5964125560538, Blast_Score=104, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6323831, Length=239, Percent_Identity=31.3807531380753, Blast_Score=99, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 45156; Mature: 45156

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure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CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]