| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is cbaB [H]
Identifier: 83720288
GI number: 83720288
Start: 3309938
End: 3310435
Strand: Reverse
Name: cbaB [H]
Synonym: BTH_I2875
Alternate gene names: 83720288
Gene position: 3310435-3309938 (Counterclockwise)
Preceding gene: 83721579
Following gene: 83719802
Centisome position: 86.91
GC content: 63.65
Gene sequence:
>498_bases ATGGCCGTCGGCCTGATGATCGTCCTCGTCGCCATGATGGTGTACACCGGCCTGCACTGGGCGATGATGCCGCCGTCCCG CGTCGAGACGATCGATCCGACGACCCTGCACGTTTCCGGCGAATTCGTCGAGAGCAACCTCGGCACCGCGCGCGAGCCGG ACGGCTCGGTCACGGTGCGCGTGATCGGCCAGCAGTACTCGTTCACGCCGCAGTGCATCCTCGTGCCGGCGAACACGCCC GTCACGTTCCGCGCGACGAGCGCGGACGTCGTGCACGGCTTTCTCATCACCGACACCAACATCAACTCGATGCTCGAGCC GGGCTTCGTCTCGACGTTCAGGACGACCTTCAGCAAGCCGAAGGATCACCTGATGCCGTGCCACGAGTATTGCGGCACGG GCCACGAGGGGATGTGGGCGCACGTCAAGGTCATTGACCGTGCGGAATTCGACAAACTGGCGTCCAGCGCGCGGAGACTG AGCTGTGTTAAAGAATAA
Upstream 100 bases:
>100_bases CGTGATCCAATAACAAGCGGCTCCCATGTCCAAACAACCTATGCCAGACCGTCTCGACGGGGCGCAGCTCGCGGCCCGGA TCGAGCGCAGGTGGGCGATC
Downstream 100 bases:
>100_bases TCGACTGGTGCTCGCCCATTTCTGGCTCGCGTTCGCGGTCTTCGGCGTCGCGCTGTTGCTCGGCGCGTGGCAGATGCTCG CGCGCAGCCCGCTGCTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome c ba(3) subunit II; Cytochrome c oxidase polypeptide II; Cytochrome cba3 subunit 2 [H]
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAVGLMIVLVAMMVYTGLHWAMMPPSRVETIDPTTLHVSGEFVESNLGTAREPDGSVTVRVIGQQYSFTPQCILVPANTP VTFRATSADVVHGFLITDTNINSMLEPGFVSTFRTTFSKPKDHLMPCHEYCGTGHEGMWAHVKVIDRAEFDKLASSARRL SCVKE
Sequences:
>Translated_165_residues MAVGLMIVLVAMMVYTGLHWAMMPPSRVETIDPTTLHVSGEFVESNLGTAREPDGSVTVRVIGQQYSFTPQCILVPANTP VTFRATSADVVHGFLITDTNINSMLEPGFVSTFRTTFSKPKDHLMPCHEYCGTGHEGMWAHVKVIDRAEFDKLASSARRL SCVKE >Mature_164_residues AVGLMIVLVAMMVYTGLHWAMMPPSRVETIDPTTLHVSGEFVESNLGTAREPDGSVTVRVIGQQYSFTPQCILVPANTPV TFRATSADVVHGFLITDTNINSMLEPGFVSTFRTTFSKPKDHLMPCHEYCGTGHEGMWAHVKVIDRAEFDKLASSARRLS CVKE
Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]
COG id: COG1622
COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001505 - InterPro: IPR008972 - InterPro: IPR015964 - InterPro: IPR002429 - InterPro: IPR015209 [H]
Pfam domain/function: PF00116 COX2; PF09125 COX2-transmemb [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 18174; Mature: 18043
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGLMIVLVAMMVYTGLHWAMMPPSRVETIDPTTLHVSGEFVESNLGTAREPDGSVTVR CCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCEEEE VIGQQYSFTPQCILVPANTPVTFRATSADVVHGFLITDTNINSMLEPGFVSTFRTTFSKP EECCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCHHHCCCCHHHHHHHHHCCC KDHLMPCHEYCGTGHEGMWAHVKVIDRAEFDKLASSARRLSCVKE HHHCCCCHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AVGLMIVLVAMMVYTGLHWAMMPPSRVETIDPTTLHVSGEFVESNLGTAREPDGSVTVR CHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCEEEE VIGQQYSFTPQCILVPANTPVTFRATSADVVHGFLITDTNINSMLEPGFVSTFRTTFSKP EECCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCHHHCCCCHHHHHHHHHCCC KDHLMPCHEYCGTGHEGMWAHVKVIDRAEFDKLASSARRLSCVKE HHHCCCCHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7657607; 10775261 [H]