| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is pimA [H]
Identifier: 83720271
GI number: 83720271
Start: 3634786
End: 3635850
Strand: Direct
Name: pimA [H]
Synonym: BTH_I3188
Alternate gene names: 83720271
Gene position: 3634786-3635850 (Clockwise)
Preceding gene: 83720515
Following gene: 83721161
Centisome position: 95.42
GC content: 66.2
Gene sequence:
>1065_bases ATGCGCATTGCCCAAATCGCCCCGCTCTACGAAGCCGTTCCGCCCAAACTCTACGGGGGCACCGAGCGGGTCGTGTCCTA CCTGACCGAGGCGCTCGTCGAAATGGGGCACGACGTCACGCTGTTCGCGAGCGGGGATTCCGTTACTTCGGCGCGCCTGG AAGCCGCCTGGCCGCGTGCGCTGCGCCTCGATCCGTCGATTCGCGATGCGATGGCGCCCCATATGCGCCTGCTCGAGCAG GTCGCGCGCGTCGCGCACACGTTCGACATCCTGCACTTCCACCTCGACTACCTGCCGTTCCCGCTGCTGTCGCGCCTCGA CGCGCCGTTCGTCACGACGCTGCACGGCCGCCTCGATCTGCCGGAGTTGCAGCCCGTATTCGACGCGTTCCCGAACGCGC CCGTCGTGTCGATCTCGGATTCGCAGCGCATGCCGCTGCCGCAGGCCGGCTGGGCGGGCACCGTCCACCACGGGCTGCCC GGCACGCTGCTCACGCCGCAAGCCGATCGCAAGCCCGAATATCTCGCGTTCCTCGGCCGCATCTGTCCGGAAAAGCGCGT CGACACCGCGATCCGGATCGCCGCGCAAAGCGGCCTGCCGCTCAAGATTGCGGCGAAGGTCGACAAGGTCGACGAGGATT ATTTCAAGGCCGAGATCGAACCGCTCCTCGATTCCGCGCACGTCGAGTTCATCGGCGAGATCAACGAAGCGCAGAAGCCC GCGTTCCTGTCTGGCGCGAAGGCGCTGCTGTTCCCGATCGACTGGCCCGAGCCGTTCGGCCTCGTGATGATCGAGGCAAT GGCGTGCGGCACGCCGGTCGTCGCGTTCAATCGCGGCTCCGTGCCGGAAGTCATCGACGACGGCCTGACGGGCTTCATCG TCGAGGACGTGCAAGGCGCCGTGGGCGCGCTGCACCGGATCGACGAATTGTCACGCGATGCAATCCGCGCGCAATTCGAG CAACGTTTCAGCTCGCATGCAATGGCGCGGCGCTATATCGACATCTATGAAACGCTTCGCGACGCGGCCAAGCAGCCGCA ATGGCGACGCGTAGCGGCGGGTTAA
Upstream 100 bases:
>100_bases ACCGCCCCGTCTGCCCGCAGGCAGGCGCTCACCGCTTACCGGAGCGAAGCTCGCACCGCCCCACGGCGAGTTCCGCCCTC TTCGCAACGGAGAAACGCTC
Downstream 100 bases:
>100_bases CCCTTTGGCCAGCGTCATTGGAGAAATGACGCGCCCATTACGCTTTGGATAGCAGAAAGCCGCATCGGGAAATGCGGCTT TCTTTTTGCCAAGCGCCGGA
Product: group 1 family glycosyl transferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSVTSARLEAAWPRALRLDPSIRDAMAPHMRLLEQ VARVAHTFDILHFHLDYLPFPLLSRLDAPFVTTLHGRLDLPELQPVFDAFPNAPVVSISDSQRMPLPQAGWAGTVHHGLP GTLLTPQADRKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKVDEDYFKAEIEPLLDSAHVEFIGEINEAQKP AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIDDGLTGFIVEDVQGAVGALHRIDELSRDAIRAQFE QRFSSHAMARRYIDIYETLRDAAKQPQWRRVAAG
Sequences:
>Translated_354_residues MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSVTSARLEAAWPRALRLDPSIRDAMAPHMRLLEQ VARVAHTFDILHFHLDYLPFPLLSRLDAPFVTTLHGRLDLPELQPVFDAFPNAPVVSISDSQRMPLPQAGWAGTVHHGLP GTLLTPQADRKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKVDEDYFKAEIEPLLDSAHVEFIGEINEAQKP AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIDDGLTGFIVEDVQGAVGALHRIDELSRDAIRAQFE QRFSSHAMARRYIDIYETLRDAAKQPQWRRVAAG >Mature_354_residues MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSVTSARLEAAWPRALRLDPSIRDAMAPHMRLLEQ VARVAHTFDILHFHLDYLPFPLLSRLDAPFVTTLHGRLDLPELQPVFDAFPNAPVVSISDSQRMPLPQAGWAGTVHHGLP GTLLTPQADRKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKVDEDYFKAEIEPLLDSAHVEFIGEINEAQKP AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIDDGLTGFIVEDVQGAVGALHRIDELSRDAIRAQFE QRFSSHAMARRYIDIYETLRDAAKQPQWRRVAAG
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.57 [H]
Molecular weight: Translated: 39126; Mature: 39126
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSVTSARLEAAWPRA CCCHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCC LRLDPSIRDAMAPHMRLLEQVARVAHTFDILHFHLDYLPFPLLSRLDAPFVTTLHGRLDL EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCC PELQPVFDAFPNAPVVSISDSQRMPLPQAGWAGTVHHGLPGTLLTPQADRKPEYLAFLGR CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHH ICPEKRVDTAIRIAAQSGLPLKIAAKVDKVDEDYFKAEIEPLLDSAHVEFIGEINEAQKP HCCHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIDDGLTGFIVEDVQGA HHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCHHHHHHHHHH VGALHRIDELSRDAIRAQFEQRFSSHAMARRYIDIYETLRDAAKQPQWRRVAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSVTSARLEAAWPRA CCCHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCC LRLDPSIRDAMAPHMRLLEQVARVAHTFDILHFHLDYLPFPLLSRLDAPFVTTLHGRLDL EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCC PELQPVFDAFPNAPVVSISDSQRMPLPQAGWAGTVHHGLPGTLLTPQADRKPEYLAFLGR CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHH ICPEKRVDTAIRIAAQSGLPLKIAAKVDKVDEDYFKAEIEPLLDSAHVEFIGEINEAQKP HCCHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIDDGLTGFIVEDVQGA HHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCHHHHHHHHHH VGALHRIDELSRDAIRAQFEQRFSSHAMARRYIDIYETLRDAAKQPQWRRVAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12068013 [H]