| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is gltX [H]
Identifier: 83719945
GI number: 83719945
Start: 2251166
End: 2252575
Strand: Direct
Name: gltX [H]
Synonym: BTH_I1984
Alternate gene names: 83719945
Gene position: 2251166-2252575 (Clockwise)
Preceding gene: 83718648
Following gene: 83719930
Centisome position: 59.1
GC content: 66.81
Gene sequence:
>1410_bases ATGACCCGTCCTGTACGCACCCGTTTTGCGCCGAGCCCCACCGGCTTCATCCATCTCGGCAACATCCGATCCGCGCTTTA TCCGTGGGCGTTCGCCCGCAAGATGAAGGGCACGTTCGTGCTGCGGATCGAGGACACCGATGTCGAGCGTTCGAGCCAGG AGGCGGTCGACGCGATCCTCGAAGGGATGGCGTGGCTCGGCCTCGATTACGACGAAGGCCCGTACTATCAGATGCAGCGG ATGGATCGCTATCGCGAAGTGCTCGCGCAGATGCAGGAGAAGGGCCTCGTCTACCCGTGCTACATGTCGACCGAAGAGCT CGACGCGTTGCGCGAGCGCCAGCGCGCGGCGGGCGAGAAGCCGCGCTACGACGGCACGTGGCGCCCGGAGCCGGGCAAGG TGCTGCCCGAGCCGCCCGCCGGCGTCGCGCCCGTGCTGCGCTTCCGCAATCCGCTGACAGGCACGGTGGCCTGGGACGAT GCGGTGAAGGGCCGCGTCGAGATCTCGAACGAGGAACTCGACGATCTCGTCGTCGCGCGTCCCGACGGCACGCCGATGTA CAACTTCTGCGTCGTCGTCGACGATCTCGACATGGGCATCACGCACGTGATCCGCGGCGACGACCACGTGAACAACACGC CGCGCCAGATCAACATCCTGCGCGCGCTCGGCGGCGAAGTGCCGGTGTACGCGCACTTGCCGACCGTGCTCAACGAGCAG GGCGAGAAGATGAGCAAGCGTCACGGCGCGATGAGCGTGATGGGCTATCGCGATGCCGGCTATCTGCCTGAGGCGGTGCT CAACTATCTCGCGCGCCTTGGCTGGTCGCACGGCGACGCGGAGATCTTCACGCGCGAGCAGTTCGTCGAATGGTTCGACC TCGAGCATCTCGGCAAGTCGCCCGCGCAGTACGACCATAACAAGCTGAACTGGTTGAACAACCATTACATCAAGGAAGCG GACGACGCGCGTCTCGCCGGGCTGGCGAAGCCGTTCTTCGCGGCGCTCGGCATCGACGCCGGCGCGATCGAGCAGGGGCC GGACCTCGTAAGCGTGATGGGGCTGATGAAGGACCGCGCGTCGACGGTGAAGGAAATCGCGGAGAATTCGGCGATGTTCT ACCGTGCGCCCGCGCCCGGCGCGGATGCGCTCGCGCAGCACGTGACCGACGCGGTGCGTCCGGCGCTCGTGGAGTTCGCG GCGGCGCTGAAGACGGTCGAATGGACGAAGGAGGCGATCGCGGCCGCGCTGAAGGCCGTGCTCGGTGCGCACAAGCTGAA GATGCCGCAGCTCGCGATGCCGGTGCGCCTGCTCGTGGCGGGCACGACGCACACGCCGTCGATCGACGCGGTGCTGCTGC TGTTCGGCCGCGACGTCGTCGTGTCGCGTATCGAGGCGGCGCTCGCGTAA
Upstream 100 bases:
>100_bases CTTTCCGTTCCGGTCGCGTGCACCCCCGGCAATGCCGGGCGGCGTGCGCCGCCGCGTCGTTTCAATTGATGCGCCGCTTG AGGCGTTCGAGCTATCGTTT
Downstream 100 bases:
>100_bases GCGCGCGGTACGTTTGCGGGGCGGCGTCGGTCGAAGTAGCGAGCCGATCGAATGCGCGTACGCGGCCTCGCAAAAAATTT TGCTCGAGACACAAATAGGG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSSQEAVDAILEGMAWLGLDYDEGPYYQMQR MDRYREVLAQMQEKGLVYPCYMSTEELDALRERQRAAGEKPRYDGTWRPEPGKVLPEPPAGVAPVLRFRNPLTGTVAWDD AVKGRVEISNEELDDLVVARPDGTPMYNFCVVVDDLDMGITHVIRGDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQ GEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFTREQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEA DDARLAGLAKPFFAALGIDAGAIEQGPDLVSVMGLMKDRASTVKEIAENSAMFYRAPAPGADALAQHVTDAVRPALVEFA AALKTVEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHTPSIDAVLLLFGRDVVVSRIEAALA
Sequences:
>Translated_469_residues MTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSSQEAVDAILEGMAWLGLDYDEGPYYQMQR MDRYREVLAQMQEKGLVYPCYMSTEELDALRERQRAAGEKPRYDGTWRPEPGKVLPEPPAGVAPVLRFRNPLTGTVAWDD AVKGRVEISNEELDDLVVARPDGTPMYNFCVVVDDLDMGITHVIRGDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQ GEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFTREQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEA DDARLAGLAKPFFAALGIDAGAIEQGPDLVSVMGLMKDRASTVKEIAENSAMFYRAPAPGADALAQHVTDAVRPALVEFA AALKTVEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHTPSIDAVLLLFGRDVVVSRIEAALA >Mature_468_residues TRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSSQEAVDAILEGMAWLGLDYDEGPYYQMQRM DRYREVLAQMQEKGLVYPCYMSTEELDALRERQRAAGEKPRYDGTWRPEPGKVLPEPPAGVAPVLRFRNPLTGTVAWDDA VKGRVEISNEELDDLVVARPDGTPMYNFCVVVDDLDMGITHVIRGDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQG EKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFTREQFVEWFDLEHLGKSPAQYDHNKLNWLNNHYIKEAD DARLAGLAKPFFAALGIDAGAIEQGPDLVSVMGLMKDRASTVKEIAENSAMFYRAPAPGADALAQHVTDAVRPALVEFAA ALKTVEWTKEAIAAALKAVLGAHKLKMPQLAMPVRLLVAGTTHTPSIDAVLLLFGRDVVVSRIEAALA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=330, Percent_Identity=35.4545454545455, Blast_Score=196, Evalue=3e-50, Organism=Escherichia coli, GI1788743, Length=466, Percent_Identity=49.1416309012876, Blast_Score=463, Evalue=1e-132, Organism=Escherichia coli, GI226510925, Length=245, Percent_Identity=37.9591836734694, Blast_Score=144, Evalue=8e-36, Organism=Escherichia coli, GI1786895, Length=312, Percent_Identity=22.4358974358974, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71993394, Length=479, Percent_Identity=28.1837160751566, Blast_Score=176, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6324540, Length=332, Percent_Identity=35.5421686746988, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6321192, Length=233, Percent_Identity=26.1802575107296, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24665321, Length=497, Percent_Identity=28.3702213279678, Blast_Score=207, Evalue=2e-53,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 52046; Mature: 51915
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSSQEAVDAIL CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH EGMAWLGLDYDEGPYYQMQRMDRYREVLAQMQEKGLVYPCYMSTEELDALRERQRAAGEK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCC PRYDGTWRPEPGKVLPEPPAGVAPVLRFRNPLTGTVAWDDAVKGRVEISNEELDDLVVAR CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCEEEEC PDGTPMYNFCVVVDDLDMGITHVIRGDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQ CCCCCEEEEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHH GEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFTREQFVEWFDLEHLGKS HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC PAQYDHNKLNWLNNHYIKEADDARLAGLAKPFFAALGIDAGAIEQGPDLVSVMGLMKDRA CCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH STVKEIAENSAMFYRAPAPGADALAQHVTDAVRPALVEFAAALKTVEWTKEAIAAALKAV HHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAHKLKMPQLAMPVRLLVAGTTHTPSIDAVLLLFGRDVVVSRIEAALA HHHHHCCCCHHHCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure TRPVRTRFAPSPTGFIHLGNIRSALYPWAFARKMKGTFVLRIEDTDVERSSQEAVDAIL CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH EGMAWLGLDYDEGPYYQMQRMDRYREVLAQMQEKGLVYPCYMSTEELDALRERQRAAGEK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCC PRYDGTWRPEPGKVLPEPPAGVAPVLRFRNPLTGTVAWDDAVKGRVEISNEELDDLVVAR CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCCEEEEC PDGTPMYNFCVVVDDLDMGITHVIRGDDHVNNTPRQINILRALGGEVPVYAHLPTVLNEQ CCCCCEEEEEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHH GEKMSKRHGAMSVMGYRDAGYLPEAVLNYLARLGWSHGDAEIFTREQFVEWFDLEHLGKS HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC PAQYDHNKLNWLNNHYIKEADDARLAGLAKPFFAALGIDAGAIEQGPDLVSVMGLMKDRA CCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH STVKEIAENSAMFYRAPAPGADALAQHVTDAVRPALVEFAAALKTVEWTKEAIAAALKAV HHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAHKLKMPQLAMPVRLLVAGTTHTPSIDAVLLLFGRDVVVSRIEAALA HHHHHCCCCHHHCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA