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The map label for this gene is ygfU [H]

Identifier: 83719943

GI number: 83719943

Start: 786276

End: 787649

Strand: Reverse

Name: ygfU [H]

Synonym: BTH_I0683

Alternate gene names: 83719943

Gene position: 787649-786276 (Counterclockwise)

Preceding gene: 83721509

Following gene: 83718398

Centisome position: 20.68

GC content: 65.87

Gene sequence:

>1374_bases
ATGCAATCGAACACGGTCCATCCGTGCGATGAGGTGTTGCCGTCCGGCAAGCTGCTGACGCTCGGGCTGCAACACGTTCT
CGTCATGTATGCGGGCGCCGTCGCGGTGCCGCTCATCGTCGGCGGCGCGCTCAAGCTGCCGAAAGACCAGATCGCGTTCC
TCATCAGCGCGGATCTGTTCGCCTGCGGAATCGCGACGCTGATCCAGACGCTCGGCGTGTGGCTCTTCGGCATCCGCCTG
CCCGTCATCATGGGCTGCACGTTCGCGGCCGTCGGCCCGATGATCGCGATCGGCACGAACCCGGGCCTCGGCATTCTCGA
CATCTTCGGCTCGACGATCGCCGCGGGCGCGATCGGCATCGTGCTCGCGCCGATGATCGGCAAGCTGCTGCGGTTCTTTC
CGCCCGTCGTCGTCGGCACCGTGATCTCGGTGATCGGGCTGTCGCTGATGGAAGTCGGCATCAACTGGGCGGCGGGCGGC
GTCGGCAATCCGAACTACGGAGACCCGGTCTATCTCGGGCTGTCGTTCATCGTGCTCGCGCTGATCCTCGTCATCAACAA
GTTCGGCCGCGGCTTCGTCGCGAACATCTCGGTGTTGCTCGGGATGGTCGCGGGCTTCGCGATCGCGTTCGCCGCGGGCC
GCGTGAACACCGACGGCGTCGCGGCGGCGCCGTGGGTCGGCTTCGTCGCGCCGTTTCATTTCGGACTCCCGCATTTCGAT
CCGCTCGCGATCGCGACGATGGTGATCGTGATGTTCGTCACGTTCATCGAATCGACCGGGATGTTCCTCGCGGTCGGCGA
CATGGTCGAGCGGCCCGTCGATCAGGAAACGCTCGTGCGCGGGCTGCGCGTCGACGGGCTCGGCACGCTGATCGGCGGCA
TCTTCAATTCGTTTCCGCACACGTCGTTCTCGCAGAACGTCGGGCTGATCGGCGTGACGGGCGTGAAGAGCCGCTTCGTC
TGCGCGACGGGCGGCATGATCCTCGTGCTGCTCGGGCTCTTTCCGAAGATGGCGCAGCTCGTCGCGTCGGTGCCGCCGTT
CGTGCTCGGCGGCGCAGGCATCGTGATGTTCGGGATGGTGGCCGCGAACGGCGTGAAGGTCCTGTCGAAGGTCGACTTCG
TGCACAACCACCACAATCTGTTCATCGTCGCGGTGAGCATCGGCCTCGGGCTCGTGCCCGTCGTGTCGCCGAACTTCTTC
TCGAAGCTGCCCGCCGCGCTCGCGCCGATCCTCCATAGCGGAATCCTGCTCGCGTCGGTGTCGGCCGTCGTGCTCAATCT
CGTGTTCAACGGGATGAAGGGCGAGAGGGACGCGCGCTGCGACATTCACAGCGCGGGCTGCGACTTCGACGGGCGGCCGG
CCGATCTGCATTGA

Upstream 100 bases:

>100_bases
GACGCAGCGAAGCACGGAATAGAAACCTGTGCTCTTGTTGCGATTCGTCGATGCGCATAACGTTGAACCACCATCAAAAC
AAGATCATGGAGTGAGACAG

Downstream 100 bases:

>100_bases
GCCGCGGACGCGCGGCGCGCGGGCGATCGAACAGGCGCGCCGCCTGTCGAATCGCCTCGCCGACCTCGCGTCTCGATCCG
ATCATTGAATTACGATCGCG

Product: xanthine/uracil permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MQSNTVHPCDEVLPSGKLLTLGLQHVLVMYAGAVAVPLIVGGALKLPKDQIAFLISADLFACGIATLIQTLGVWLFGIRL
PVIMGCTFAAVGPMIAIGTNPGLGILDIFGSTIAAGAIGIVLAPMIGKLLRFFPPVVVGTVISVIGLSLMEVGINWAAGG
VGNPNYGDPVYLGLSFIVLALILVINKFGRGFVANISVLLGMVAGFAIAFAAGRVNTDGVAAAPWVGFVAPFHFGLPHFD
PLAIATMVIVMFVTFIESTGMFLAVGDMVERPVDQETLVRGLRVDGLGTLIGGIFNSFPHTSFSQNVGLIGVTGVKSRFV
CATGGMILVLLGLFPKMAQLVASVPPFVLGGAGIVMFGMVAANGVKVLSKVDFVHNHHNLFIVAVSIGLGLVPVVSPNFF
SKLPAALAPILHSGILLASVSAVVLNLVFNGMKGERDARCDIHSAGCDFDGRPADLH

Sequences:

>Translated_457_residues
MQSNTVHPCDEVLPSGKLLTLGLQHVLVMYAGAVAVPLIVGGALKLPKDQIAFLISADLFACGIATLIQTLGVWLFGIRL
PVIMGCTFAAVGPMIAIGTNPGLGILDIFGSTIAAGAIGIVLAPMIGKLLRFFPPVVVGTVISVIGLSLMEVGINWAAGG
VGNPNYGDPVYLGLSFIVLALILVINKFGRGFVANISVLLGMVAGFAIAFAAGRVNTDGVAAAPWVGFVAPFHFGLPHFD
PLAIATMVIVMFVTFIESTGMFLAVGDMVERPVDQETLVRGLRVDGLGTLIGGIFNSFPHTSFSQNVGLIGVTGVKSRFV
CATGGMILVLLGLFPKMAQLVASVPPFVLGGAGIVMFGMVAANGVKVLSKVDFVHNHHNLFIVAVSIGLGLVPVVSPNFF
SKLPAALAPILHSGILLASVSAVVLNLVFNGMKGERDARCDIHSAGCDFDGRPADLH
>Mature_457_residues
MQSNTVHPCDEVLPSGKLLTLGLQHVLVMYAGAVAVPLIVGGALKLPKDQIAFLISADLFACGIATLIQTLGVWLFGIRL
PVIMGCTFAAVGPMIAIGTNPGLGILDIFGSTIAAGAIGIVLAPMIGKLLRFFPPVVVGTVISVIGLSLMEVGINWAAGG
VGNPNYGDPVYLGLSFIVLALILVINKFGRGFVANISVLLGMVAGFAIAFAAGRVNTDGVAAAPWVGFVAPFHFGLPHFD
PLAIATMVIVMFVTFIESTGMFLAVGDMVERPVDQETLVRGLRVDGLGTLIGGIFNSFPHTSFSQNVGLIGVTGVKSRFV
CATGGMILVLLGLFPKMAQLVASVPPFVLGGAGIVMFGMVAANGVKVLSKVDFVHNHHNLFIVAVSIGLGLVPVVSPNFF
SKLPAALAPILHSGILLASVSAVVLNLVFNGMKGERDARCDIHSAGCDFDGRPADLH

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Homo sapiens, GI44680148, Length=517, Percent_Identity=25.7253384912959, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI40316845, Length=517, Percent_Identity=25.7253384912959, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI44680145, Length=484, Percent_Identity=26.0330578512397, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI44680143, Length=488, Percent_Identity=25.8196721311475, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI222080105, Length=511, Percent_Identity=24.26614481409, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI222080107, Length=224, Percent_Identity=29.4642857142857, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87082181, Length=437, Percent_Identity=59.2677345537757, Blast_Score=519, Evalue=1e-148,
Organism=Escherichia coli, GI1790087, Length=443, Percent_Identity=31.8284424379233, Blast_Score=187, Evalue=9e-49,
Organism=Escherichia coli, GI87082178, Length=465, Percent_Identity=28.6021505376344, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI1788843, Length=451, Percent_Identity=26.6075388026608, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI87081818, Length=409, Percent_Identity=29.5843520782396, Blast_Score=115, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17558856, Length=499, Percent_Identity=25.6513026052104, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17541904, Length=456, Percent_Identity=22.1491228070175, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17542262, Length=441, Percent_Identity=24.4897959183673, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17542260, Length=195, Percent_Identity=29.7435897435897, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71993493, Length=194, Percent_Identity=28.3505154639175, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21356175, Length=477, Percent_Identity=25.1572327044025, Blast_Score=98, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017588
- InterPro:   IPR006042
- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 47354; Mature: 47354

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS01116 XANTH_URACIL_PERMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]