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The map label for this gene is yafE [H]

Identifier: 83719907

GI number: 83719907

Start: 990810

End: 991565

Strand: Direct

Name: yafE [H]

Synonym: BTH_I0870

Alternate gene names: 83719907

Gene position: 990810-991565 (Clockwise)

Preceding gene: 83720935

Following gene: 83720099

Centisome position: 26.01

GC content: 72.22

Gene sequence:

>756_bases
ATGAAGCATCACGATCGCGTTGCCGCCGCGTTCGGCACGACCGCATCCGCCTATTTGACGAGCGCCGTCCATGCGACGGG
CGCCGATCTCGACACGCTTGCCGCCGAGATCGGCGCGACGCCCGGCGCGCGCGTGCTGGATCTCGGCTGCGGCGCGGGCC
ACGCGAGCTTCGCCGCCGCGCGCGGCGGCGCGACCGAGGTGATCGCGTACGACCTCGCGCCGCAGATGCTCGCGACGGTC
GAGGCGGCGGCGCGAGAGCGCGGCCTCGCGAGCGTGCGAATCGAGCAGGGCGCGGCCGAGCGCTTGCCGTTCGCCGATGC
GTCGTTCGACTGGATCGTGAGCCGGATGAGCGCGCACCACTGGCGCGACGTGCCGCGCGCGCTCGCCGAAGCGCGCCGCG
TGCTGAAGCCGGGCGGCCGCGCGCTGTTCGTCGACATCGCGGGCGCCGATCATCCGCTCGTCGACACGCATCTGCAAACG
GTGGAGGTGTTGCGCGACGCGTCGCATGTGCGCGATTACCGCGCGGACGAGTGGCTCGCGTTCTTTGCGCGGGCGGGCTT
CGTCGCGCGGGTGCGCGAGCGCTGGCGCCTGTCGATCGGGTTCGACGGCTGGGTCGCGCGCATGAGGACGCCCGACGTGC
GTGCGAACGCGATCCGCGCGTTGTGGGCGGACGCGCCGGACGAGGTGCGCGCGTATTTCGACGTGCAGCCGGACGGCTCG
TTCAAGCTCGATGCGTTGATGATCGACGCGCGTTGA

Upstream 100 bases:

>100_bases
TGGCTTGTACCGGTACCAATCGGACTCTATTGTAGCGGCTCATGACGGCCGACGCAGTCGGCCGGCCGCCTCAGATCCCC
ACGTGACAAGGAGTTCGCCG

Downstream 100 bases:

>100_bases
GGCGGCGGCGAAGGGCGGCGAAGGGCGGCGAAGGGCGAGCCGGGAGAAGCCGGCCCGGTTCGGTCGCGCAAGCCGTGCGC
CGGCTCGCGTGATCGCCGTT

Product: UbiE/COQ5 family methlytransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKHHDRVAAAFGTTASAYLTSAVHATGADLDTLAAEIGATPGARVLDLGCGAGHASFAAARGGATEVIAYDLAPQMLATV
EAAARERGLASVRIEQGAAERLPFADASFDWIVSRMSAHHWRDVPRALAEARRVLKPGGRALFVDIAGADHPLVDTHLQT
VEVLRDASHVRDYRADEWLAFFARAGFVARVRERWRLSIGFDGWVARMRTPDVRANAIRALWADAPDEVRAYFDVQPDGS
FKLDALMIDAR

Sequences:

>Translated_251_residues
MKHHDRVAAAFGTTASAYLTSAVHATGADLDTLAAEIGATPGARVLDLGCGAGHASFAAARGGATEVIAYDLAPQMLATV
EAAARERGLASVRIEQGAAERLPFADASFDWIVSRMSAHHWRDVPRALAEARRVLKPGGRALFVDIAGADHPLVDTHLQT
VEVLRDASHVRDYRADEWLAFFARAGFVARVRERWRLSIGFDGWVARMRTPDVRANAIRALWADAPDEVRAYFDVQPDGS
FKLDALMIDAR
>Mature_251_residues
MKHHDRVAAAFGTTASAYLTSAVHATGADLDTLAAEIGATPGARVLDLGCGAGHASFAAARGGATEVIAYDLAPQMLATV
EAAARERGLASVRIEQGAAERLPFADASFDWIVSRMSAHHWRDVPRALAEARRVLKPGGRALFVDIAGADHPLVDTHLQT
VEVLRDASHVRDYRADEWLAFFARAGFVARVRERWRLSIGFDGWVARMRTPDVRANAIRALWADAPDEVRAYFDVQPDGS
FKLDALMIDAR

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=202, Percent_Identity=47.029702970297, Blast_Score=184, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27241; Mature: 27241

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHHDRVAAAFGTTASAYLTSAVHATGADLDTLAAEIGATPGARVLDLGCGAGHASFAAA
CCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
RGGATEVIAYDLAPQMLATVEAAARERGLASVRIEQGAAERLPFADASFDWIVSRMSAHH
CCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHH
WRDVPRALAEARRVLKPGGRALFVDIAGADHPLVDTHLQTVEVLRDASHVRDYRADEWLA
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FFARAGFVARVRERWRLSIGFDGWVARMRTPDVRANAIRALWADAPDEVRAYFDVQPDGS
HHHHHHHHHHHHHHHEEECCCCHHHHHCCCCCHHHHHHHHHHCCCCHHEEEEEEECCCCC
FKLDALMIDAR
EEEEEEEEECC
>Mature Secondary Structure
MKHHDRVAAAFGTTASAYLTSAVHATGADLDTLAAEIGATPGARVLDLGCGAGHASFAAA
CCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
RGGATEVIAYDLAPQMLATVEAAARERGLASVRIEQGAAERLPFADASFDWIVSRMSAHH
CCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHH
WRDVPRALAEARRVLKPGGRALFVDIAGADHPLVDTHLQTVEVLRDASHVRDYRADEWLA
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FFARAGFVARVRERWRLSIGFDGWVARMRTPDVRANAIRALWADAPDEVRAYFDVQPDGS
HHHHHHHHHHHHHHHEEECCCCHHHHHCCCCCHHHHHHHHHHCCCCHHEEEEEEECCCCC
FKLDALMIDAR
EEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]