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The map label for this gene is yajR [H]

Identifier: 83719859

GI number: 83719859

Start: 553165

End: 554601

Strand: Direct

Name: yajR [H]

Synonym: BTH_I0499

Alternate gene names: 83719859

Gene position: 553165-554601 (Clockwise)

Preceding gene: 83720563

Following gene: 83718627

Centisome position: 14.52

GC content: 66.18

Gene sequence:

>1437_bases
TTGTGGGTGCGCGCCCCACGGATACGAATTTGTTCCATGAACCCGGCGGAAGACGAGAGAACCAAACCTGCTACTATAAC
GACTTTTCGAGTCCGTCGTTTCAGGCTCCCAACCAATTCCCGCGCCCCCGGCAGCGGGCTTTCGCGACGCCCGGGCCGCA
GCAGGGCGGCGCGCGGCGGCAGGCGGCCGGCCCGGATCATCCGCCGCCCGGCGGCGGGCGGACCACCGATTCATTCGAAC
ACACGCCCGATGTCCAATCCGTCCGCTACCTCCACTCGCATGAGCGCGCCCGAGCTGCGCGCGACCACGTCGCTCGCGGC
GATCTTCGCGCTGCGCATGCTCGGCCTGTTCATGATCATGCCGGTGTTCTCCGTCTACGCGAAGACGATTCCCGGCGGCG
ACAATGTCGTGCTCGTCGGCATCGCGCTCGGCGCTTACGGCGTCACGCAATCGCTTCTTTACATCTTCTACGGCTGGGCG
TCGGACAAGTTCGGGCGCAAGCCGGTGATCGCGGCGGGGCTCTTGATCTTCGCGCTCGGCAGCTTCGTCGCGGCGTTCGC
GCACGACATCACGTGGATCATCGTCGGCCGGGTCATCCAGGGAATGGGGGCGGTATCGTCGGCGGTGCTCGCGTTCATCG
CCGATTTGACGTCCGAGCACAACCGGACCAAGGCGATGGCGATGGTGGGCGGCTCGATCGGCGTGTCGTTCGCGGTCGCG
ATCGTCGGCGCGCCGATCGTGTTCCACTGGGTTGGGATGAGCGGGCTCTTCGCGATCGTCGGCGCGTTGTCGGTTGTCGC
GATCGGCGTCGTGCTGTGGGTCGTGCCGGATGCGCCGCGGCCCGTGCACGTGCCCGCGCCGTTCGCCGAGGTGCTGCACA
ACGTCGAGCTGCTGCGGCTGAACTTCGGCGTGCTCGTGCTGCACGCGACGCAGACAGCATTGTTCCTCGTCGTGCCGCGC
CTGCTCGTCGACGGCGGGCTGCCCGTCGCGTCGCACTGGCAGGTCTATCTGCCGGTGATGGGGCTCGCGTTCGTGATGAT
GGTGCCGGCGATCATCGTCGCGGAAAAACAGGGCAAGATGAAGCCCGTGCTGTTGGGCGGAATTGCGGCTATCCTGATCG
GCCAGCTTTTGCTCGGCATGGCAACGCATACGATATTGATTGTCGCGGCAATCCTGTTCATCTACTTCCTGGGCTTCAAC
ATTCTGGAGGCGTCGCAGCCGTCGCTCGTGTCGAAGCTCGCGCCCGGTTCGCGCAAGGGCGCGGCCACGGGCGTGTACAA
CACGACGCAATCGATCGGGCTCGCGCTCGGCGGCGTCGTGGGCGGCGTGCTGCTGAAGCACGGCGGCCCGGACACGGTGT
TCTTCGCGTGCTCGGCGCTCGTAGCCGTGTGGCTTATAATCGCGGCCGGCATGAAACAGCCGCCGCGCAAAGCCTGA

Upstream 100 bases:

>100_bases
GTACAGCGTGTCGAACGCGAGCGACGATTTGCCCGAGCCGGACAGCCCGGTAATCACGATCAGCTTGTGCCGCGGAAGGT
CGAGATTGACGTTCTTCAGG

Downstream 100 bases:

>100_bases
CACGCGAACGCCCTTCGAAGCGCGCGGCGTGCTCCGGTCCGGCACATGCCGGGCCGATGAAGCCCTGAACGGTTTTGCCG
CGCTGTTTGGCATTGAATCA

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MWVRAPRIRICSMNPAEDERTKPATITTFRVRRFRLPTNSRAPGSGLSRRPGRSRAARGGRRPARIIRRPAAGGPPIHSN
TRPMSNPSATSTRMSAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVVLVGIALGAYGVTQSLLYIFYGWA
SDKFGRKPVIAAGLLIFALGSFVAAFAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEHNRTKAMAMVGGSIGVSFAVA
IVGAPIVFHWVGMSGLFAIVGALSVVAIGVVLWVVPDAPRPVHVPAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPR
LLVDGGLPVASHWQVYLPVMGLAFVMMVPAIIVAEKQGKMKPVLLGGIAAILIGQLLLGMATHTILIVAAILFIYFLGFN
ILEASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGVVGGVLLKHGGPDTVFFACSALVAVWLIIAAGMKQPPRKA

Sequences:

>Translated_478_residues
MWVRAPRIRICSMNPAEDERTKPATITTFRVRRFRLPTNSRAPGSGLSRRPGRSRAARGGRRPARIIRRPAAGGPPIHSN
TRPMSNPSATSTRMSAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVVLVGIALGAYGVTQSLLYIFYGWA
SDKFGRKPVIAAGLLIFALGSFVAAFAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEHNRTKAMAMVGGSIGVSFAVA
IVGAPIVFHWVGMSGLFAIVGALSVVAIGVVLWVVPDAPRPVHVPAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPR
LLVDGGLPVASHWQVYLPVMGLAFVMMVPAIIVAEKQGKMKPVLLGGIAAILIGQLLLGMATHTILIVAAILFIYFLGFN
ILEASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGVVGGVLLKHGGPDTVFFACSALVAVWLIIAAGMKQPPRKA
>Mature_478_residues
MWVRAPRIRICSMNPAEDERTKPATITTFRVRRFRLPTNSRAPGSGLSRRPGRSRAARGGRRPARIIRRPAAGGPPIHSN
TRPMSNPSATSTRMSAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGDNVVLVGIALGAYGVTQSLLYIFYGWA
SDKFGRKPVIAAGLLIFALGSFVAAFAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEHNRTKAMAMVGGSIGVSFAVA
IVGAPIVFHWVGMSGLFAIVGALSVVAIGVVLWVVPDAPRPVHVPAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPR
LLVDGGLPVASHWQVYLPVMGLAFVMMVPAIIVAEKQGKMKPVLLGGIAAILIGQLLLGMATHTILIVAAILFIYFLGFN
ILEASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGVVGGVLLKHGGPDTVFFACSALVAVWLIIAAGMKQPPRKA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=392, Percent_Identity=42.0918367346939, Blast_Score=305, Evalue=6e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50461; Mature: 50461

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVRAPRIRICSMNPAEDERTKPATITTFRVRRFRLPTNSRAPGSGLSRRPGRSRAARGG
CCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCC
RRPARIIRRPAAGGPPIHSNTRPMSNPSATSTRMSAPELRATTSLAAIFALRMLGLFMIM
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PVFSVYAKTIPGGDNVVLVGIALGAYGVTQSLLYIFYGWASDKFGRKPVIAAGLLIFALG
HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
SFVAAFAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEHNRTKAMAMVGGSIGVSFAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHH
IVGAPIVFHWVGMSGLFAIVGALSVVAIGVVLWVVPDAPRPVHVPAPFAEVLHNVELLRL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHCCCEEEEE
NFGVLVLHATQTALFLVVPRLLVDGGLPVASHWQVYLPVMGLAFVMMVPAIIVAEKQGKM
CCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCC
KPVLLGGIAAILIGQLLLGMATHTILIVAAILFIYFLGFNILEASQPSLVSKLAPGSRKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
AATGVYNTTQSIGLALGGVVGGVLLKHGGPDTVFFACSALVAVWLIIAAGMKQPPRKA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MWVRAPRIRICSMNPAEDERTKPATITTFRVRRFRLPTNSRAPGSGLSRRPGRSRAARGG
CCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCC
RRPARIIRRPAAGGPPIHSNTRPMSNPSATSTRMSAPELRATTSLAAIFALRMLGLFMIM
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PVFSVYAKTIPGGDNVVLVGIALGAYGVTQSLLYIFYGWASDKFGRKPVIAAGLLIFALG
HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
SFVAAFAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEHNRTKAMAMVGGSIGVSFAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHH
IVGAPIVFHWVGMSGLFAIVGALSVVAIGVVLWVVPDAPRPVHVPAPFAEVLHNVELLRL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHCCCEEEEE
NFGVLVLHATQTALFLVVPRLLVDGGLPVASHWQVYLPVMGLAFVMMVPAIIVAEKQGKM
CCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCC
KPVLLGGIAAILIGQLLLGMATHTILIVAAILFIYFLGFNILEASQPSLVSKLAPGSRKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
AATGVYNTTQSIGLALGGVVGGVLLKHGGPDTVFFACSALVAVWLIIAAGMKQPPRKA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]