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The map label for this gene is siaP [H]

Identifier: 83719792

GI number: 83719792

Start: 923691

End: 924701

Strand: Direct

Name: siaP [H]

Synonym: BTH_I0811

Alternate gene names: 83719792

Gene position: 923691-924701 (Clockwise)

Preceding gene: 83720730

Following gene: 83719248

Centisome position: 24.25

GC content: 64.69

Gene sequence:

>1011_bases
ATGAGCATGAATCGCAGAGCTTTCGTGGGCGTGGTCGCGGGCATCGCCGCGGTGACCGTTGTACCGCGCGCCGCGCGCGC
CGCGGAATTCACGTACAAGCTCGGACACGACCAACCGATTACGCATCCGCAGCACATTCGCGCGGTGGAGGCGGCTGATA
AGATCGCCAATGCGTCGGGCGGCCGGATGGTCCTCGAAATCTATCCGAACAGCCAGCTCGGCAGCGATACGCAGATGGTC
GCGCAGGTACGTTCGGGCGCGTTGGAGATGACGCTGCAAGGCGACATCATTCTGGGCAACATCGTGCCGGCCGCGTCGCT
CGCCGGTCTACCGTTCGCGTTCGCCGGCTATGACGAGCTATGGCGCGCGATGGACGGCGAATTCGGCCGCGCCATTCACG
CGGAAATTGAGCGCAAGACCGGGCTGCACGTGATGGAGAAGGGATGGGACGCCGGCTTCCGTCATCTGTTCACGAGTGAG
AAGCTGGTGCACAGCGCGGCGGACATGAAGGGCCTGAAGCTGCGTGTACCGGCGGCCGCGATCGACCAGTCGCTGTTCAA
GTCGCTTGGTTCCGCGCCGACACCGGTGCCGAGCGGCGACGTTTATACCGCGCTGCAAACGCGGCTCGTCGATGGCGCGG
AGGGTCCGCTCGTCACGATCGAAAACGCGAAATACTATGAGGCCGCAAAGATTGTTTCGCTAACGAGCCATCAACCGACG
CCGTTCGAGCTGGTCGTGAATGGCGCCGCGTGGCGGCGTCTGCCGAAGGATCTTCAGGCGATCGCGTCCCAGTACCTGAA
CGAAGCCGCGCTGTTCGCGCGCGCGGACATCGCGAACGGCGAGGGCGGTCTCAAGCAACGGCTACGTTCGCAAGGCGTGA
CCCTCGTCGATCCGGACCGCGATTCGTTCCGGCGCGCGGTGCGCGACGCGGGCCTCTACCGGCAATGGCGCGACAGCTAC
GGCGTGGCGCCGTTTGCGATGCTGGAGAAAGTCGTTGGCACGCTGGCATGA

Upstream 100 bases:

>100_bases
GCTGGCGGCGCTAGTGGTGATCGCCGCCGTGCCGTGGTTGTCCACAGTCGCGGTTTGAGGGTGTGATACGAACAATTACG
GAACGGTGAGGAGACACATC

Downstream 100 bases:

>100_bases
CGAAGCTGCGGCGGCGCGGTGATCCTGGAGCGGGTGCGCACTGGCCGTCGGACCGGCGCAGGTTGGCGGCGAGATCGGAG
TCGGGTATCGTTCTGCGGAT

Product: TRAP dicarboxylate family transporter subunit DctP

Products: NA

Alternate protein names: Extracytoplasmic solute receptor protein siaP; N-acetylneuraminic-binding protein; Neu5Ac-binding protein [H]

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSMNRRAFVGVVAGIAAVTVVPRAARAAEFTYKLGHDQPITHPQHIRAVEAADKIANASGGRMVLEIYPNSQLGSDTQMV
AQVRSGALEMTLQGDIILGNIVPAASLAGLPFAFAGYDELWRAMDGEFGRAIHAEIERKTGLHVMEKGWDAGFRHLFTSE
KLVHSAADMKGLKLRVPAAAIDQSLFKSLGSAPTPVPSGDVYTALQTRLVDGAEGPLVTIENAKYYEAAKIVSLTSHQPT
PFELVVNGAAWRRLPKDLQAIASQYLNEAALFARADIANGEGGLKQRLRSQGVTLVDPDRDSFRRAVRDAGLYRQWRDSY
GVAPFAMLEKVVGTLA

Sequences:

>Translated_336_residues
MSMNRRAFVGVVAGIAAVTVVPRAARAAEFTYKLGHDQPITHPQHIRAVEAADKIANASGGRMVLEIYPNSQLGSDTQMV
AQVRSGALEMTLQGDIILGNIVPAASLAGLPFAFAGYDELWRAMDGEFGRAIHAEIERKTGLHVMEKGWDAGFRHLFTSE
KLVHSAADMKGLKLRVPAAAIDQSLFKSLGSAPTPVPSGDVYTALQTRLVDGAEGPLVTIENAKYYEAAKIVSLTSHQPT
PFELVVNGAAWRRLPKDLQAIASQYLNEAALFARADIANGEGGLKQRLRSQGVTLVDPDRDSFRRAVRDAGLYRQWRDSY
GVAPFAMLEKVVGTLA
>Mature_335_residues
SMNRRAFVGVVAGIAAVTVVPRAARAAEFTYKLGHDQPITHPQHIRAVEAADKIANASGGRMVLEIYPNSQLGSDTQMVA
QVRSGALEMTLQGDIILGNIVPAASLAGLPFAFAGYDELWRAMDGEFGRAIHAEIERKTGLHVMEKGWDAGFRHLFTSEK
LVHSAADMKGLKLRVPAAAIDQSLFKSLGSAPTPVPSGDVYTALQTRLVDGAEGPLVTIENAKYYEAAKIVSLTSHQPTP
FELVVNGAAWRRLPKDLQAIASQYLNEAALFARADIANGEGGLKQRLRSQGVTLVDPDRDSFRRAVRDAGLYRQWRDSYG
VAPFAMLEKVVGTLA

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid. This protein specifically binds sialic acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=321, Percent_Identity=30.2180685358255, Blast_Score=157, Evalue=8e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36321; Mature: 36190

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMNRRAFVGVVAGIAAVTVVPRAARAAEFTYKLGHDQPITHPQHIRAVEAADKIANASG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
GRMVLEIYPNSQLGSDTQMVAQVRSGALEMTLQGDIILGNIVPAASLAGLPFAFAGYDEL
CEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHCCCCEEECCHHHH
WRAMDGEFGRAIHAEIERKTGLHVMEKGWDAGFRHLFTSEKLVHSAADMKGLKLRVPAAA
HHHHCCHHCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHH
IDQSLFKSLGSAPTPVPSGDVYTALQTRLVDGAEGPLVTIENAKYYEAAKIVSLTSHQPT
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHEEECCCCCC
PFELVVNGAAWRRLPKDLQAIASQYLNEAALFARADIANGEGGLKQRLRSQGVTLVDPDR
CCEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCH
DSFRRAVRDAGLYRQWRDSYGVAPFAMLEKVVGTLA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SMNRRAFVGVVAGIAAVTVVPRAARAAEFTYKLGHDQPITHPQHIRAVEAADKIANASG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
GRMVLEIYPNSQLGSDTQMVAQVRSGALEMTLQGDIILGNIVPAASLAGLPFAFAGYDEL
CEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHCCCCEEECCHHHH
WRAMDGEFGRAIHAEIERKTGLHVMEKGWDAGFRHLFTSEKLVHSAADMKGLKLRVPAAA
HHHHCCHHCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHH
IDQSLFKSLGSAPTPVPSGDVYTALQTRLVDGAEGPLVTIENAKYYEAAKIVSLTSHQPT
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHEEECCCCCC
PFELVVNGAAWRRLPKDLQAIASQYLNEAALFARADIANGEGGLKQRLRSQGVTLVDPDR
CCEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCH
DSFRRAVRDAGLYRQWRDSYGVAPFAMLEKVVGTLA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA