| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719691
Identifier: 83719691
GI number: 83719691
Start: 1098917
End: 1100386
Strand: Reverse
Name: 83719691
Synonym: BTH_I0973
Alternate gene names: NA
Gene position: 1100386-1098917 (Counterclockwise)
Preceding gene: 83718547
Following gene: 83718953
Centisome position: 28.89
GC content: 66.8
Gene sequence:
>1470_bases ATGCTTTACCAATTTCACGAATTCCAGCGGGCGATGCTGAGCCCGCTGACCGCCTGGGCGCAAGCCGCATCCAAATCGTT CGCGAACCCGTCGAGCCCTCTTTCGCTCGTGCCGGGCGCGACGCGCCTCGCGGCGGGCTACGAATTGCTGTACCGGCTCG GCAAGGATTACGAGAAGCCCGAGTTCGGGATTCACCAGATCGTCAAGGACGGGCACAACATTCCGATCGTCGAGCAGACG ATCATCGAGAAGCCGTTCTGCCGGCTGCTGCGCTTCAAGCGCTACGCGGACGATTCGGGCGCCGTCGGGCAACTGAAGGA CGAGCCCGTCGTGCTCGTGTGCGCGCCGCTGTCGGGCCACCACGCCACGCTCTTGCGCGACACGGTCCGCACGCTGCTGC AGGACCACAAGGTCTACATCACCGACTGGATCGACGCGCGAATGGTGCCGGCCGAAGTCGGCCCGTTCCACCTCGACGAC TACGTCGACTACATCCAGGAATTCATCCGCCATATCGGCGCGCGCAACCTGCACGTGATCTCGGTATGCCAGCCGACCGT GCCCGTGCTCGCGGCGATCTCGCTGATGGCGAGCCGCGGCGAGGACACGCCGCTCACGATGACGATGATGGGCGGGCCGA TCGACGCGCGCAAGAGCCCGACGTCGGTGAATTCGCTCGCGACGAACCGCTCGCATTCGTGGTTCGAGAACAACGTGATC CACACGGTGCCGGCGAACTATCCGGGCGAAGGCCGCAAAGTCTATCCGGGCTTCCTGCAGCACACGGGCTTCGTCGCGAT GAATCCGGAGCGCCACGCGCAGTCTCACTGGGACTTCTATCAGAGCCTGTTGCGCGGCGACGAGGAAGACGCCGAGGCGC ACCGCCGCTTCTACGACGAATACAACGCGGTGCTCGACATGGCGGCCGAATACTATCTGGACACGATCCGCATCGTGTTC CAGGAGTTCCGCCTCGCCGAAGGCACGTGGGACATCCACGGCGAGCGCGTGAAGCCGGCCGACATCCATTCGACCGCGCT GATGACGATCGAAGGCGAACTCGACGACATCTCGGGCAGCGGCCAGACGCATGTCGCGCACGAGCTGTGCACGGGCATCC CGCAGGCGCACCGGCGCAGCCTTACCGCCGAGAAGTGCGGCCACTACGGCATCTTCTCGGGCCGCCGCTGGCGCACGATC ATCTATCCGCAACTGCGCGATTTCATCCGCGAGCATGCGTCGCAGCCGAAGAAGCCGGCGCCGCAGGCCGGCCCCACGCC GACTTCGCCTTCCACGCCGCGTCAGTCGACGTCGGGCCGCGAAACGGCGAGCGCCGCGCCCGCGAAGGCGGCCGCGCTCA GGCTGACGAGCGCGAAGCGCCCTGCCGCGAAAACCCGCGCGGCGAAGCCGGCCGCCGCCAAGCGCGCCGCGACGAAGGTC GCATCGGCGCGCGCGCGCAAGGTCGCCTGA
Upstream 100 bases:
>100_bases GATTCGATCTGACTAGCGAATCGCTCCGATTGCTGACTCACACGGCACGCCGCGACGCCCCGCGCCGCCTTCGCGCACCG TTCTCCCACCGGGAGCTCGC
Downstream 100 bases:
>100_bases CGCGCGCCGTCCGCCTCGCGCGCCGCCGGACAGCGCGCCGCTTCGCGCGACCGAGCGCGAGCGGCGCGCAATTTTCTGGG GCGGCGCGACATCTTCGCGC
Product: intracellular PHB depolymerase
Products: NA
Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; PHB De-Polymerase Domain Protein; PHB De-Polymerase; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MLYQFHEFQRAMLSPLTAWAQAASKSFANPSSPLSLVPGATRLAAGYELLYRLGKDYEKPEFGIHQIVKDGHNIPIVEQT IIEKPFCRLLRFKRYADDSGAVGQLKDEPVVLVCAPLSGHHATLLRDTVRTLLQDHKVYITDWIDARMVPAEVGPFHLDD YVDYIQEFIRHIGARNLHVISVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARKSPTSVNSLATNRSHSWFENNVI HTVPANYPGEGRKVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEEDAEAHRRFYDEYNAVLDMAAEYYLDTIRIVF QEFRLAEGTWDIHGERVKPADIHSTALMTIEGELDDISGSGQTHVAHELCTGIPQAHRRSLTAEKCGHYGIFSGRRWRTI IYPQLRDFIREHASQPKKPAPQAGPTPTSPSTPRQSTSGRETASAAPAKAAALRLTSAKRPAAKTRAAKPAAAKRAATKV ASARARKVA
Sequences:
>Translated_489_residues MLYQFHEFQRAMLSPLTAWAQAASKSFANPSSPLSLVPGATRLAAGYELLYRLGKDYEKPEFGIHQIVKDGHNIPIVEQT IIEKPFCRLLRFKRYADDSGAVGQLKDEPVVLVCAPLSGHHATLLRDTVRTLLQDHKVYITDWIDARMVPAEVGPFHLDD YVDYIQEFIRHIGARNLHVISVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARKSPTSVNSLATNRSHSWFENNVI HTVPANYPGEGRKVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEEDAEAHRRFYDEYNAVLDMAAEYYLDTIRIVF QEFRLAEGTWDIHGERVKPADIHSTALMTIEGELDDISGSGQTHVAHELCTGIPQAHRRSLTAEKCGHYGIFSGRRWRTI IYPQLRDFIREHASQPKKPAPQAGPTPTSPSTPRQSTSGRETASAAPAKAAALRLTSAKRPAAKTRAAKPAAAKRAATKV ASARARKVA >Mature_489_residues MLYQFHEFQRAMLSPLTAWAQAASKSFANPSSPLSLVPGATRLAAGYELLYRLGKDYEKPEFGIHQIVKDGHNIPIVEQT IIEKPFCRLLRFKRYADDSGAVGQLKDEPVVLVCAPLSGHHATLLRDTVRTLLQDHKVYITDWIDARMVPAEVGPFHLDD YVDYIQEFIRHIGARNLHVISVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARKSPTSVNSLATNRSHSWFENNVI HTVPANYPGEGRKVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEEDAEAHRRFYDEYNAVLDMAAEYYLDTIRIVF QEFRLAEGTWDIHGERVKPADIHSTALMTIEGELDDISGSGQTHVAHELCTGIPQAHRRSLTAEKCGHYGIFSGRRWRTI IYPQLRDFIREHASQPKKPAPQAGPTPTSPSTPRQSTSGRETASAAPAKAAALRLTSAKRPAAKTRAAKPAAAKRAATKV ASARARKVA
Specific function: Unknown
COG id: COG4553
COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54358; Mature: 54358
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYQFHEFQRAMLSPLTAWAQAASKSFANPSSPLSLVPGATRLAAGYELLYRLGKDYEKP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCC EFGIHQIVKDGHNIPIVEQTIIEKPFCRLLRFKRYADDSGAVGQLKDEPVVLVCAPLSGH CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCC HATLLRDTVRTLLQDHKVYITDWIDARMVPAEVGPFHLDDYVDYIQEFIRHIGARNLHVI HHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE SVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARKSPTSVNSLATNRSHSWFENNVI EECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCHHHCCCE HTVPANYPGEGRKVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEEDAEAHRRFYDE EECCCCCCCCCCEECCHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YNAVLDMAAEYYLDTIRIVFQEFRLAEGTWDIHGERVKPADIHSTALMTIEGELDDISGS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC GQTHVAHELCTGIPQAHRRSLTAEKCGHYGIFSGRRWRTIIYPQLRDFIREHASQPKKPA CCHHHHHHHHHCCCHHHHHCCCHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCC PQAGPTPTSPSTPRQSTSGRETASAAPAKAAALRLTSAKRPAAKTRAAKPAAAKRAATKV CCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH ASARARKVA HHHHHHCCC >Mature Secondary Structure MLYQFHEFQRAMLSPLTAWAQAASKSFANPSSPLSLVPGATRLAAGYELLYRLGKDYEKP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCC EFGIHQIVKDGHNIPIVEQTIIEKPFCRLLRFKRYADDSGAVGQLKDEPVVLVCAPLSGH CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCC HATLLRDTVRTLLQDHKVYITDWIDARMVPAEVGPFHLDDYVDYIQEFIRHIGARNLHVI HHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE SVCQPTVPVLAAISLMASRGEDTPLTMTMMGGPIDARKSPTSVNSLATNRSHSWFENNVI EECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCHHHCCCE HTVPANYPGEGRKVYPGFLQHTGFVAMNPERHAQSHWDFYQSLLRGDEEDAEAHRRFYDE EECCCCCCCCCCEECCHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YNAVLDMAAEYYLDTIRIVFQEFRLAEGTWDIHGERVKPADIHSTALMTIEGELDDISGS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC GQTHVAHELCTGIPQAHRRSLTAEKCGHYGIFSGRRWRTIIYPQLRDFIREHASQPKKPA CCHHHHHHHHHCCCHHHHHCCCHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCC PQAGPTPTSPSTPRQSTSGRETASAAPAKAAALRLTSAKRPAAKTRAAKPAAAKRAATKV CCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH ASARARKVA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA