| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is map-1 [H]
Identifier: 83719494
GI number: 83719494
Start: 2236784
End: 2237611
Strand: Direct
Name: map-1 [H]
Synonym: BTH_I1973
Alternate gene names: 83719494
Gene position: 2236784-2237611 (Clockwise)
Preceding gene: 83720679
Following gene: 83721383
Centisome position: 58.72
GC content: 69.2
Gene sequence:
>828_bases ATGGCGCGTTCACGACACGTTCCGATCCGCACGCAAGCCGAGATCGCGATGGCGCGCCGCGCCGGCACGATGGCGGCGCG GGTGTTGGGCATGATCGCGCCGCACGTGAAGGCTGGCGTGACGACGAACGAGCTCGACCGGCTATGCCGCGAGTACATCG TCGACATCCTGCGCGCGCGGCCCGCGAACATCGGCTATCACGGGTATCCGAAGACGATCTGCGCATCCGTGAACCACGTG GTCTGCCACGGCATTCCGTCCGATCACGCATTGAAGGACGGCGACATCATCAATATCGACGTCGCGCTCGACAGCGACGG CTGGTACGGCGACACGAGCCGCATGTACTTCGTCGGCGAGCCGGCTGAGCCGGCTCGGCGTCTCGTCGATGCGACGTATG AGGCGATGATGGCGGGCGTCGCGGCGGTGCGCCCGGGCGCGACGCTCGGCGACGTCGGCCACGCGATCCAGAGCGTCGCG CATCGCGAGGGCTTCAGCGTCGTACGCGAGTATTGCGGCCACGGCATCGGCCGCATCTACCACGACGAGCCGCAAGTGCT CCATTACGGCCGTCCGGGCACGGGGCTGCGTCTCGCGCCCGGGATGATCTTCACGATCGAGCCGATGCTCAATGCGGGGC GCGCCGAAACGCGGCAGCTCGCCGACGGCTGGACGGTCGTCACGCAGGATCGCTCGTGGTCCGCGCAGTGGGAGCATATG GTCGTCGTGACGGAAGACGGCTTCGACATCCTGACGCCGTGGCCGGACGCAGCGCCCGAGCGGTCGCCCGTGACGGCGCG CGCGGCCGGCGCGCCCGAGCGCGGCTGA
Upstream 100 bases:
>100_bases ATCCGGCGCTGACCTATGCGGAGATTTGCCGGCTGTTGATCGAGACGGAAATCCATGGCGACGAAGCGGCGCCGGCCGTC GACGCCGCGAGGAGCGCATG
Downstream 100 bases:
>100_bases ATCGGCCGTCGACTGGCGGCTCGGCGCGAGGGCGCGCGGCGCGCGGGCGTTTGCGAAGCGCGCGTGCGCATCGCATCGGC GCTCGCGCGCCGCGCGTCCG
Product: methionine aminopeptidase, type I
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MARSRHVPIRTQAEIAMARRAGTMAARVLGMIAPHVKAGVTTNELDRLCREYIVDILRARPANIGYHGYPKTICASVNHV VCHGIPSDHALKDGDIINIDVALDSDGWYGDTSRMYFVGEPAEPARRLVDATYEAMMAGVAAVRPGATLGDVGHAIQSVA HREGFSVVREYCGHGIGRIYHDEPQVLHYGRPGTGLRLAPGMIFTIEPMLNAGRAETRQLADGWTVVTQDRSWSAQWEHM VVVTEDGFDILTPWPDAAPERSPVTARAAGAPERG
Sequences:
>Translated_275_residues MARSRHVPIRTQAEIAMARRAGTMAARVLGMIAPHVKAGVTTNELDRLCREYIVDILRARPANIGYHGYPKTICASVNHV VCHGIPSDHALKDGDIINIDVALDSDGWYGDTSRMYFVGEPAEPARRLVDATYEAMMAGVAAVRPGATLGDVGHAIQSVA HREGFSVVREYCGHGIGRIYHDEPQVLHYGRPGTGLRLAPGMIFTIEPMLNAGRAETRQLADGWTVVTQDRSWSAQWEHM VVVTEDGFDILTPWPDAAPERSPVTARAAGAPERG >Mature_274_residues ARSRHVPIRTQAEIAMARRAGTMAARVLGMIAPHVKAGVTTNELDRLCREYIVDILRARPANIGYHGYPKTICASVNHVV CHGIPSDHALKDGDIINIDVALDSDGWYGDTSRMYFVGEPAEPARRLVDATYEAMMAGVAAVRPGATLGDVGHAIQSVAH REGFSVVREYCGHGIGRIYHDEPQVLHYGRPGTGLRLAPGMIFTIEPMLNAGRAETRQLADGWTVVTQDRSWSAQWEHMV VVTEDGFDILTPWPDAAPERSPVTARAAGAPERG
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=256, Percent_Identity=40.625, Blast_Score=205, Evalue=3e-53, Organism=Homo sapiens, GI40385867, Length=252, Percent_Identity=38.8888888888889, Blast_Score=195, Evalue=3e-50, Organism=Escherichia coli, GI1786364, Length=251, Percent_Identity=55.7768924302789, Blast_Score=294, Evalue=5e-81, Organism=Caenorhabditis elegans, GI71996291, Length=258, Percent_Identity=38.3720930232558, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6323273, Length=258, Percent_Identity=38.3720930232558, Blast_Score=207, Evalue=2e-54, Organism=Drosophila melanogaster, GI21355531, Length=250, Percent_Identity=41.6, Blast_Score=208, Evalue=3e-54, Organism=Drosophila melanogaster, GI24583427, Length=244, Percent_Identity=39.344262295082, Blast_Score=192, Evalue=2e-49,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29953; Mature: 29822
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSRHVPIRTQAEIAMARRAGTMAARVLGMIAPHVKAGVTTNELDRLCREYIVDILRAR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC PANIGYHGYPKTICASVNHVVCHGIPSDHALKDGDIINIDVALDSDGWYGDTSRMYFVGE CCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEC PAEPARRLVDATYEAMMAGVAAVRPGATLGDVGHAIQSVAHREGFSVVREYCGHGIGRIY CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE HDEPQVLHYGRPGTGLRLAPGMIFTIEPMLNAGRAETRQLADGWTVVTQDRSWSAQWEHM CCCCCEEEECCCCCCCEECCCEEEEEECHHCCCCHHHHHHCCCCEEEEECCCCCCCCEEE VVVTEDGFDILTPWPDAAPERSPVTARAAGAPERG EEEEECCCEEECCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure ARSRHVPIRTQAEIAMARRAGTMAARVLGMIAPHVKAGVTTNELDRLCREYIVDILRAR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCC PANIGYHGYPKTICASVNHVVCHGIPSDHALKDGDIINIDVALDSDGWYGDTSRMYFVGE CCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEC PAEPARRLVDATYEAMMAGVAAVRPGATLGDVGHAIQSVAHREGFSVVREYCGHGIGRIY CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE HDEPQVLHYGRPGTGLRLAPGMIFTIEPMLNAGRAETRQLADGWTVVTQDRSWSAQWEHM CCCCCEEEECCCCCCCEECCCEEEEEECHHCCCCHHHHHHCCCCEEEEECCCCCCCCEEE VVVTEDGFDILTPWPDAAPERSPVTARAAGAPERG EEEEECCCEEECCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]