Click here to switch to the map view.

The map label for this gene is ywhC [H]

Identifier: 83719488

GI number: 83719488

Start: 2150455

End: 2151120

Strand: Direct

Name: ywhC [H]

Synonym: BTH_I1903

Alternate gene names: 83719488

Gene position: 2150455-2151120 (Clockwise)

Preceding gene: 83719037

Following gene: 83720110

Centisome position: 56.45

GC content: 66.07

Gene sequence:

>666_bases
ATGGATGCTTCTTCCCTGATACAGACGATTGCCGTCTACGCCATTCCCGTGGTCTTCGCGATCACGCTGCACGAGGCCGC
CCACGGCTATGTCGCTCGCCTGCTGGGCGACAATACCGCGTACATGATGGGCCGGGTGTCGTTCAATCCGATGCGCCACA
TCGATCCGTTCGGCACGATCGTGATTCCGCTCGTGCTGTACTTCCTCACGAGCGGCGCGTTCCTGTTCGGCTACGCGAAG
CCCGTGCCCGTCACGTTCCGCAATCTGCGCAATCCGCGCTGGGGGAGCCTCTGGGTCGCGCTCGCCGGGCCAGGCTGCAA
CTTCGTCCAGGCGCTGATCTGGGGCTTCGTGAGCATCGGCCTCGCCGCGCTCGCAATCGACGAGCCCTTCTTCACGCGCA
TGGCGGGCGCGGGCGTCGGCGTGAATCTCGTGCTCGCGGTGCTGAATCTCTTTCCGCTGCCGCCGCTCGACGGCGGGCGC
GTGCTCGCGGCGCTGCTGCCGCCGAAGCAATCGATCGCGCTGTCGCGGCTCGAGCCGTACGGTTTCTTCATCGTGCTCGC
GCTCGTCGCGACGGGCCTCCTGACGAAGCTCTGGCTGCGGCCGCTGGTGAGCGCCGGCTATGCGGTCGTGACGGCCATCC
TGACTCCTTTCGCCTCGCTTTTCTAA

Upstream 100 bases:

>100_bases
GAGCGCCGCCGCGCCGTCCCGGCGCAACGGAGCGGCCGCCGTTTCGGTCCGCATGCATGCGCGCCGTTCGCGCGTTTGCC
GCTTGTTACAATAGCGCGCT

Downstream 100 bases:

>100_bases
CGATAATCATGTTCCCAGACCGTATCTTTTCCGGCATGCGACCCACGGGGTCGCTCCATCTCGGCCACTATCACGGCGTG
CTGAAGAACTGGGTCAAGCT

Product: M50 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MDASSLIQTIAVYAIPVVFAITLHEAAHGYVARLLGDNTAYMMGRVSFNPMRHIDPFGTIVIPLVLYFLTSGAFLFGYAK
PVPVTFRNLRNPRWGSLWVALAGPGCNFVQALIWGFVSIGLAALAIDEPFFTRMAGAGVGVNLVLAVLNLFPLPPLDGGR
VLAALLPPKQSIALSRLEPYGFFIVLALVATGLLTKLWLRPLVSAGYAVVTAILTPFASLF

Sequences:

>Translated_221_residues
MDASSLIQTIAVYAIPVVFAITLHEAAHGYVARLLGDNTAYMMGRVSFNPMRHIDPFGTIVIPLVLYFLTSGAFLFGYAK
PVPVTFRNLRNPRWGSLWVALAGPGCNFVQALIWGFVSIGLAALAIDEPFFTRMAGAGVGVNLVLAVLNLFPLPPLDGGR
VLAALLPPKQSIALSRLEPYGFFIVLALVATGLLTKLWLRPLVSAGYAVVTAILTPFASLF
>Mature_221_residues
MDASSLIQTIAVYAIPVVFAITLHEAAHGYVARLLGDNTAYMMGRVSFNPMRHIDPFGTIVIPLVLYFLTSGAFLFGYAK
PVPVTFRNLRNPRWGSLWVALAGPGCNFVQALIWGFVSIGLAALAIDEPFFTRMAGAGVGVNLVLAVLNLFPLPPLDGGR
VLAALLPPKQSIALSRLEPYGFFIVLALVATGLLTKLWLRPLVSAGYAVVTAILTPFASLF

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 23731; Mature: 23731

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASSLIQTIAVYAIPVVFAITLHEAAHGYVARLLGDNTAYMMGRVSFNPMRHIDPFGTI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHCCCCHHHH
VIPLVLYFLTSGAFLFGYAKPVPVTFRNLRNPRWGSLWVALAGPGCNFVQALIWGFVSIG
HHHHHHHHHHCCHHEEECCCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
LAALAIDEPFFTRMAGAGVGVNLVLAVLNLFPLPPLDGGRVLAALLPPKQSIALSRLEPY
HHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHCCHH
GFFIVLALVATGLLTKLWLRPLVSAGYAVVTAILTPFASLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDASSLIQTIAVYAIPVVFAITLHEAAHGYVARLLGDNTAYMMGRVSFNPMRHIDPFGTI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHCCCCHHHH
VIPLVLYFLTSGAFLFGYAKPVPVTFRNLRNPRWGSLWVALAGPGCNFVQALIWGFVSIG
HHHHHHHHHHCCHHEEECCCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
LAALAIDEPFFTRMAGAGVGVNLVLAVLNLFPLPPLDGGRVLAALLPPKQSIALSRLEPY
HHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHCCHH
GFFIVLALVATGLLTKLWLRPLVSAGYAVVTAILTPFASLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]