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The map label for this gene is yciO [H]

Identifier: 83719037

GI number: 83719037

Start: 2149727

End: 2150356

Strand: Direct

Name: yciO [H]

Synonym: BTH_I1902

Alternate gene names: 83719037

Gene position: 2149727-2150356 (Clockwise)

Preceding gene: 83720996

Following gene: 83719488

Centisome position: 56.44

GC content: 69.37

Gene sequence:

>630_bases
ATGTCCCAATTCTTCAGGATTCACCCGGATGATCCGCAGCCGCGTCTCATCAAGCAGGCGGCCGAAATCGTGCGCGGCGG
CGGCGTGATCGCGCTGCCGACCGATTCTAGCTACGCGCTCGCGTGCCATCTGGACGACAAGGACGCGGTCGAGCGCGTGC
GCCGCATCCGCGGGCTCGACGAGAAGCAGCACCTGTCGCTCCTCGTGCGCGATCTGTCCGAGCTCGCGACGTTCGCGATG
GTCGACAACCGCCAGTACCGGCTGATCAAGTCGGTGACGCCGGGGCCGTACGTGTTCATCCTGCAGGCGACGAAGGAAGT
GCCGCGGCGGCTGTCGCACCCGTCGCGCAAGACGATCGGCCTGCGCGTGCCCGCGCATGCGATCACGCTCGCGCTGCTCG
AGTCGCTCGGCCAGCCGCTGCTCGGCACGACGCTGATCCTGCCGCCCGACGACGAACCGCTCAACGATCCGGAGGAAATC
CGCGCGCGCCTCGAAAAGCAGGTCGACCTCGTGATCGACGGCGGCGCGTGCCCGCGCGAGCCGTCGACGGTGATCGACCT
GACGGGTGACGAGCCGCAACTCGTGCGGGCGGGGCGCGGCCCGCTCGAGCCGTTCGGCCTCGCCGCGTGA

Upstream 100 bases:

>100_bases
GCCCGATCTCAAACCCGTCTGGGAGCGCTGGCTATAGCGGCGTTTGCCGGCAGCACATCCGGCCGCGGGCTCGCGCGCGC
CGATCCATACTTTTGTCCCC

Downstream 100 bases:

>100_bases
GCGCCGCCGCGCCGTCCCGGCGCAACGGAGCGGCCGCCGTTTCGGTCCGCATGCATGCGCGCCGTTCGCGCGTTTGCCGC
TTGTTACAATAGCGCGCTAT

Product: Sua5/YciO/YrdC/YwlC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSQFFRIHPDDPQPRLIKQAAEIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLDEKQHLSLLVRDLSELATFAM
VDNRQYRLIKSVTPGPYVFILQATKEVPRRLSHPSRKTIGLRVPAHAITLALLESLGQPLLGTTLILPPDDEPLNDPEEI
RARLEKQVDLVIDGGACPREPSTVIDLTGDEPQLVRAGRGPLEPFGLAA

Sequences:

>Translated_209_residues
MSQFFRIHPDDPQPRLIKQAAEIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLDEKQHLSLLVRDLSELATFAM
VDNRQYRLIKSVTPGPYVFILQATKEVPRRLSHPSRKTIGLRVPAHAITLALLESLGQPLLGTTLILPPDDEPLNDPEEI
RARLEKQVDLVIDGGACPREPSTVIDLTGDEPQLVRAGRGPLEPFGLAA
>Mature_208_residues
SQFFRIHPDDPQPRLIKQAAEIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLDEKQHLSLLVRDLSELATFAMV
DNRQYRLIKSVTPGPYVFILQATKEVPRRLSHPSRKTIGLRVPAHAITLALLESLGQPLLGTTLILPPDDEPLNDPEEIR
ARLEKQVDLVIDGGACPREPSTVIDLTGDEPQLVRAGRGPLEPFGLAA

Specific function: Unknown

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI87081864, Length=205, Percent_Identity=59.5121951219512, Blast_Score=251, Evalue=3e-68,
Organism=Drosophila melanogaster, GI78707274, Length=188, Percent_Identity=29.7872340425532, Blast_Score=77, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR004388
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 23039; Mature: 22908

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFFRIHPDDPQPRLIKQAAEIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLD
CCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHCCC
EKQHLSLLVRDLSELATFAMVDNRQYRLIKSVTPGPYVFILQATKEVPRRLSHPSRKTIG
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECHHHHHHHHCCCCCCEEE
LRVPAHAITLALLESLGQPLLGTTLILPPDDEPLNDPEEIRARLEKQVDLVIDGGACPRE
EECCHHHHHHHHHHHHCCCHHCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCC
PSTVIDLTGDEPQLVRAGRGPLEPFGLAA
CCEEEEECCCCHHHEECCCCCCCCCCCCC
>Mature Secondary Structure 
SQFFRIHPDDPQPRLIKQAAEIVRGGGVIALPTDSSYALACHLDDKDAVERVRRIRGLD
CCCEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHCCC
EKQHLSLLVRDLSELATFAMVDNRQYRLIKSVTPGPYVFILQATKEVPRRLSHPSRKTIG
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECHHHHHHHHCCCCCCEEE
LRVPAHAITLALLESLGQPLLGTTLILPPDDEPLNDPEEIRARLEKQVDLVIDGGACPRE
EECCHHHHHHHHHHHHCCCHHCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCC
PSTVIDLTGDEPQLVRAGRGPLEPFGLAA
CCEEEEECCCCHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]