| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83719431
Identifier: 83719431
GI number: 83719431
Start: 3577024
End: 3578967
Strand: Reverse
Name: 83719431
Synonym: BTH_I3137
Alternate gene names: NA
Gene position: 3578967-3577024 (Counterclockwise)
Preceding gene: 83718819
Following gene: 83721411
Centisome position: 93.96
GC content: 56.22
Gene sequence:
>1944_bases TTGCCGGTCAACTTCGAAGGCATTCCCGCATCGCTGAAAGAGCGTCCGCAGTGGCTCCTGTGGCAGTACGAGTATGACGG TAAGCGGTGGACGAAGGTCCCGAAGCAATCGAACGGACGCCACGCAAGCACGAAGAATCCCAACACGTGGACGAATTTCG ATCAGGTCCGTGACGAGTATCAAAGTGGTGAGTTCGACGGTATCGGCATCGTTCTTGTCGATGGCTTGTTCGGTATCGAT TTCGATCATGTGCTGGATGCGGACTGCAACCCGGAAGCATGGGCCGACGACGTGCTGCGACAGTTTCCACATACATACGT CGAGAGATCGCCGAGTGGCGATGGTCTTCATCTCTTCGGTCTCGGTGAACTGGTCGAATGCGGCAAGGCCGGTCCCGGCA ATCGTCTCGAATGCTACGACCAGAAGAGTCCGCGCTACTTCACGATGACGGGCCATGAGTTCCGCAGCGGCTACGATGTA ACCGAACAGCAAGAAGGGCAGAGCTGGCTGCACGAACACTACTATAGCCAATCGGCCAAGCCTGTTGATTCGAATGTCGT TGAACTGGTGCAGCGGCAGGGCAAGGTCCTGACCGACGATGAAATTATTGAAAGGGCTTCCCACATCGGTGACGGCGAGC GATTCCGCAATCTGTTCCATGACGGCCACTGCTTCGATCATCCGAGTGCGTCTGAAGCAGACCTTGCCCTGTGCAACATG TTCGCCCGCTTCACGCGCGATGCGGACCAGATTGATGGACTCTTCCGGCGATCCGGCCTATACCGTGAAAAGTGGGACGA ATCGCATACGGCGGGGCAGACCTACGGCCAGACGACGATCTCGAAGGCGCTGACCGGCGAGAACGCCGCGAAGCAAGTCG AAGCCGCTGTTCCGCGCACTGGTGGATTCGTCCGTGCTGCTGATGCAATGGCCGAAACGACCACCGTCGATTGGTTGATC GACGGTGTGATGGAACAGGGCACGTCCTGCATGCTGTTCGGTGCATCCGGCAGTGGCAAGAGTTTCGTTGCAATCGATTG GTCATGTTGCATCGCGACCGGCACCGACTGGCACGGCCAAGATGTCGCACCGGGTGCGGTTTTCTACATCGTCGGCGAAG GTCAGAAGGGCTTCAACCGACGACTGTTCGCTTGGGAAAAAGCAAACGACGTATCCTTGCACACCGCACCGCTATACCTA TGGCAGTCGCCGGTTCCACTATCTGATCCCAACAGCGTGAAGCGGTTGGCCGACGACATCACGAAGGCCGCATCTGAGAA CGAACCGCCACGAATGATCGTCATCGACACACTGGCGCGAAATATCGGTGGTGCGGACGAGAACAGTAACCGGGACATGG GCCTTCTCATGAACCTGTTGGATACCCACTTGCGTCTTCCTTTCAACGCATCTGTCGTCATCGTGCATCACTCGGGGAAT GGCGACAAAGACAGGTTGCGCGGCGCATCTGGCCTGACTGGCGCTGTTGACTACGAATATCGCGTTGACAAGAAAGGTGA CGAACGTTCCTTGGTCTGCAAGAAGAACAAAGAAGGTGAAGAAGGTACTGAACACCACTTCCGAATCGAGCGCGTACCCC TTGACGATGGAATGTCTTCTGCTGCCCTTGTAATGCTTGATGCGACATCGAAGAAAGCTGCTGGTGCGAAACTCGGTGAT GCAGCGAAAACTTGCCTACGTGTTCTGCGGGACATCACCGAGTTCGAAGGCGTTGAACCGCCAGATGAACTGAAACAGGC ATTGGGCTTGATGTATCCGCCGCTTGTCGTCCCGAAGAGTAAGTTGAAACAGGCATCAATCGAAGCGGGTATCAGCAATG GAAGCCCGGACGCATGCCGCAGGGCGTTTGATCGTGCCTTTGACCGACTGGTGAACGAAGCCAACTTGGTCGCAACCTAC GGCGATTACGTCTGGTCGAAGTGA
Upstream 100 bases:
>100_bases CCGTCATCCAATCGCCGTTTGGCATTCCGCTGCTTGCGGTTACGCTCTCCCGTGGTGCCGAATGATGTCGGCGCTACCTG TCCAAAAAAAGCCGGTCGCC
Downstream 100 bases:
>100_bases CAGACGGACAAGCCGGACAAGTCGATGTAACAAGAAGGCCAAGAACTTGACCGCCGACCTAATAAGGACAGACACGGACA CACCCCTATAAGGGGTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: AAA ATPase; Helicase; DNA Primase; Nucleoside Triphosphatase D5 Family; ATPase-Like Protein; DNA-Polymerase Or DNA-Primase; Primase; Bacteriophage Protein-Like Protein; Phage-Like Protein; Conjugative Transposon DNA Recombination Protein; Regulatory Prophage Protein; ATPase; Phage-Related DNA Primase/Helicase; TOPRIM Domain Protein; Primase Superantigen-Encoding Pathogenicity Islands SaPI; DNAB Domain Protein Helicase Domain Protein
Number of amino acids: Translated: 647; Mature: 646
Protein sequence:
>647_residues MPVNFEGIPASLKERPQWLLWQYEYDGKRWTKVPKQSNGRHASTKNPNTWTNFDQVRDEYQSGEFDGIGIVLVDGLFGID FDHVLDADCNPEAWADDVLRQFPHTYVERSPSGDGLHLFGLGELVECGKAGPGNRLECYDQKSPRYFTMTGHEFRSGYDV TEQQEGQSWLHEHYYSQSAKPVDSNVVELVQRQGKVLTDDEIIERASHIGDGERFRNLFHDGHCFDHPSASEADLALCNM FARFTRDADQIDGLFRRSGLYREKWDESHTAGQTYGQTTISKALTGENAAKQVEAAVPRTGGFVRAADAMAETTTVDWLI DGVMEQGTSCMLFGASGSGKSFVAIDWSCCIATGTDWHGQDVAPGAVFYIVGEGQKGFNRRLFAWEKANDVSLHTAPLYL WQSPVPLSDPNSVKRLADDITKAASENEPPRMIVIDTLARNIGGADENSNRDMGLLMNLLDTHLRLPFNASVVIVHHSGN GDKDRLRGASGLTGAVDYEYRVDKKGDERSLVCKKNKEGEEGTEHHFRIERVPLDDGMSSAALVMLDATSKKAAGAKLGD AAKTCLRVLRDITEFEGVEPPDELKQALGLMYPPLVVPKSKLKQASIEAGISNGSPDACRRAFDRAFDRLVNEANLVATY GDYVWSK
Sequences:
>Translated_647_residues MPVNFEGIPASLKERPQWLLWQYEYDGKRWTKVPKQSNGRHASTKNPNTWTNFDQVRDEYQSGEFDGIGIVLVDGLFGID FDHVLDADCNPEAWADDVLRQFPHTYVERSPSGDGLHLFGLGELVECGKAGPGNRLECYDQKSPRYFTMTGHEFRSGYDV TEQQEGQSWLHEHYYSQSAKPVDSNVVELVQRQGKVLTDDEIIERASHIGDGERFRNLFHDGHCFDHPSASEADLALCNM FARFTRDADQIDGLFRRSGLYREKWDESHTAGQTYGQTTISKALTGENAAKQVEAAVPRTGGFVRAADAMAETTTVDWLI DGVMEQGTSCMLFGASGSGKSFVAIDWSCCIATGTDWHGQDVAPGAVFYIVGEGQKGFNRRLFAWEKANDVSLHTAPLYL WQSPVPLSDPNSVKRLADDITKAASENEPPRMIVIDTLARNIGGADENSNRDMGLLMNLLDTHLRLPFNASVVIVHHSGN GDKDRLRGASGLTGAVDYEYRVDKKGDERSLVCKKNKEGEEGTEHHFRIERVPLDDGMSSAALVMLDATSKKAAGAKLGD AAKTCLRVLRDITEFEGVEPPDELKQALGLMYPPLVVPKSKLKQASIEAGISNGSPDACRRAFDRAFDRLVNEANLVATY GDYVWSK >Mature_646_residues PVNFEGIPASLKERPQWLLWQYEYDGKRWTKVPKQSNGRHASTKNPNTWTNFDQVRDEYQSGEFDGIGIVLVDGLFGIDF DHVLDADCNPEAWADDVLRQFPHTYVERSPSGDGLHLFGLGELVECGKAGPGNRLECYDQKSPRYFTMTGHEFRSGYDVT EQQEGQSWLHEHYYSQSAKPVDSNVVELVQRQGKVLTDDEIIERASHIGDGERFRNLFHDGHCFDHPSASEADLALCNMF ARFTRDADQIDGLFRRSGLYREKWDESHTAGQTYGQTTISKALTGENAAKQVEAAVPRTGGFVRAADAMAETTTVDWLID GVMEQGTSCMLFGASGSGKSFVAIDWSCCIATGTDWHGQDVAPGAVFYIVGEGQKGFNRRLFAWEKANDVSLHTAPLYLW QSPVPLSDPNSVKRLADDITKAASENEPPRMIVIDTLARNIGGADENSNRDMGLLMNLLDTHLRLPFNASVVIVHHSGNG DKDRLRGASGLTGAVDYEYRVDKKGDERSLVCKKNKEGEEGTEHHFRIERVPLDDGMSSAALVMLDATSKKAAGAKLGDA AKTCLRVLRDITEFEGVEPPDELKQALGLMYPPLVVPKSKLKQASIEAGISNGSPDACRRAFDRAFDRLVNEANLVATYG DYVWSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71714; Mature: 71582
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVNFEGIPASLKERPQWLLWQYEYDGKRWTKVPKQSNGRHASTKNPNTWTNFDQVRDEY CCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QSGEFDGIGIVLVDGLFGIDFDHVLDADCNPEAWADDVLRQFPHTYVERSPSGDGLHLFG HCCCCCCEEEEEECCHHCCCHHHHCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCEEEEE LGELVECGKAGPGNRLECYDQKSPRYFTMTGHEFRSGYDVTEQQEGQSWLHEHYYSQSAK HHHHHHHCCCCCCCCEEEECCCCCCEEEECCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC PVDSNVVELVQRQGKVLTDDEIIERASHIGDGERFRNLFHDGHCFDHPSASEADLALCNM CCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH FARFTRDADQIDGLFRRSGLYREKWDESHTAGQTYGQTTISKALTGENAAKQVEAAVPRT HHHHHCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHCHHHHHHHHCCCHHHHHHHHHCCCC GGFVRAADAMAETTTVDWLIDGVMEQGTSCMLFGASGSGKSFVAIDWSCCIATGTDWHGQ CCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCC DVAPGAVFYIVGEGQKGFNRRLFAWEKANDVSLHTAPLYLWQSPVPLSDPNSVKRLADDI CCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHH TKAASENEPPRMIVIDTLARNIGGADENSNRDMGLLMNLLDTHLRLPFNASVVIVHHSGN HHHHCCCCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCC GDKDRLRGASGLTGAVDYEYRVDKKGDERSLVCKKNKEGEEGTEHHFRIERVPLDDGMSS CCHHHHCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCC AALVMLDATSKKAAGAKLGDAAKTCLRVLRDITEFEGVEPPDELKQALGLMYPPLVVPKS EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHH KLKQASIEAGISNGSPDACRRAFDRAFDRLVNEANLVATYGDYVWSK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCC >Mature Secondary Structure PVNFEGIPASLKERPQWLLWQYEYDGKRWTKVPKQSNGRHASTKNPNTWTNFDQVRDEY CCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH QSGEFDGIGIVLVDGLFGIDFDHVLDADCNPEAWADDVLRQFPHTYVERSPSGDGLHLFG HCCCCCCEEEEEECCHHCCCHHHHCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCEEEEE LGELVECGKAGPGNRLECYDQKSPRYFTMTGHEFRSGYDVTEQQEGQSWLHEHYYSQSAK HHHHHHHCCCCCCCCEEEECCCCCCEEEECCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC PVDSNVVELVQRQGKVLTDDEIIERASHIGDGERFRNLFHDGHCFDHPSASEADLALCNM CCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH FARFTRDADQIDGLFRRSGLYREKWDESHTAGQTYGQTTISKALTGENAAKQVEAAVPRT HHHHHCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHCHHHHHHHHCCCHHHHHHHHHCCCC GGFVRAADAMAETTTVDWLIDGVMEQGTSCMLFGASGSGKSFVAIDWSCCIATGTDWHGQ CCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCC DVAPGAVFYIVGEGQKGFNRRLFAWEKANDVSLHTAPLYLWQSPVPLSDPNSVKRLADDI CCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHH TKAASENEPPRMIVIDTLARNIGGADENSNRDMGLLMNLLDTHLRLPFNASVVIVHHSGN HHHHCCCCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCC GDKDRLRGASGLTGAVDYEYRVDKKGDERSLVCKKNKEGEEGTEHHFRIERVPLDDGMSS CCHHHHCCCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCC AALVMLDATSKKAAGAKLGDAAKTCLRVLRDITEFEGVEPPDELKQALGLMYPPLVVPKS EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHH KLKQASIEAGISNGSPDACRRAFDRAFDRLVNEANLVATYGDYVWSK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA