| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718819
Identifier: 83718819
GI number: 83718819
Start: 3581602
End: 3583332
Strand: Reverse
Name: 83718819
Synonym: BTH_I3139
Alternate gene names: NA
Gene position: 3583332-3581602 (Counterclockwise)
Preceding gene: 83718784
Following gene: 83719431
Centisome position: 94.07
GC content: 54.48
Gene sequence:
>1731_bases GTGACCAATGCAGGGTTTCTTGAAGCAAACACTGCCGATGGCTTGCGAAAGTGTCTGGCTGACGAGTTCAGCAGCATCCA TGTGTTCCATCTGCGGGGAAATCAGCGAACTTCCGGTGATGTATCTCGCAGGGAAGGTGGCAAAATTTTTGGTGGCGGCA GCCGCGCACCGATTGCCATCTCGATTCTGGTCAAGAATCCGGACGCCGCGCAGCACGGCCAGATTTACTTCCATGACATC GGCGACTACCTGACGCGTGAAGAGAAGCTGGTGAAGATCAGCACCTTCGGCAGCATCGAAGGGATCACGCAAGTGGATGG TTGGCGGTCAATCACGCCCGACCAGCATGGAGATTGGTTGAAGCAGCGCGACGACCGCTTTGGTGAGTACATCGCCCTTG GCGACAAGGACAGCAAGTACGACCGAAAGATTTTTGAAATATATTCGCGTGGTGTGGCTACTAGTCGCGATGCGTGGTGC TACAACAGTTCCGCAACCACAGTGTCATCCAACATGACGCGGATGATCGATTTTTACAACACGGAGTTGTATCGCTTTAA TAAGGCGTTTCCCGGTCAGGAAAAAAAAGCACGCGAAGCGAATGTTGACGACTTTGTTGGGAGCGATCCAACGCAGATCA GTTGGAATCGCAGCTTGAAGCAGGAATTCGTGAAGAATCGGAAGTGCGAGTATGACGCGCAGTCCCTGACGCCAAGTTTG TACCGTCCCTTCGCAAAGCAGTGGCTGTACTTCAATCGTCGTCTTAACGACATGGTGTACCAGATGCCGCGTATATTCCC TGACGCCACCGCCGGGAATCTGGCGATTGTGACATCAGGTACGGGCGGACGTACTGCGTTCACCGCGTTGATGGTGAATG TCATACCGAGTCTGCATATGGCGGACATCGACGGTTCCCAATGTTTCCCGTTGTACCTGTATAGCGAACCTGCGGATGAA ATCACGGAAGTGTCGCCAAACGCCGAATTGTTCGAAGCGCCGACCGCAGCCACGGCGCATCGCGAACGTCGAGACGCACT GACGGATGAAGGGCTGACGCACTTTCAGGCTGCATATCCGGGCCAAGCGATCACCAAGGAAGACGTGTTCTATTACGTCT ATGGCTTGCTGCATTCGCCGGACTACCGTGAACGATACGGTGATACGCTTCGGAAGGAGCTGCCGCGCATCCCATGCGTG AAGACGCCTGCCGACTTCTGGGCGTTCTCGAAGGCTGGTCGTAAGCTGGCCGACCTTCACATCAACTACGAGACTGTCGC GATGTACCCATTGCAGATCGAAGGCGGCGGGCTGTTGTTGACCGATAACGACTACCGTGTCGAGAAGATGCGATACGGCA AGAACGGCAAGGACAAGGACCTGACTACGCTGATCTACAACGACAAGATCACGATCAAGGGTATCCCGCTGGAAGCCTAT GAATATGTTGTCAATGGCAAACCGGCCTTGGACTGGGTTGTCGAACGGCAGTGCGTCAAGGTTGACGATGGCAAGAACGG TAGTGGCATCGTCAACGACGCGAACGATTACGCCATCGAGACGATGAATAATCCGCGTTACCCGCTGGAACTGTTTCAGC GGGTCGTGACGGTCAGTCTGGAAACGATGAAGATCGTGAAGTCATTGCCGCATCTCGACATTCAGCAGCCGGGTCAGACT GTAGGACAGTTGATGGAAGCGAAGGACGAACCGGACGCGCTGACTGCGTGA
Upstream 100 bases:
>100_bases TGATCAACTCCGCGACGACAGCTGACATCAAGATCCCGTCGTCAAGACGGCGCTGCCGACACGCTTACACCGGATCGGCA AGAGCGGCGTAATCGGTTTC
Downstream 100 bases:
>100_bases CCGGTGCACACCCGTCGGCATCTGCAATGGTGGATCGCCGACCGGTGTACAGTGGTCGGTTGCATTGGTGTGGTCATCAC CATTGACAGTGAAGCACCGT
Product: helicase domain-containing protein
Products: NA
Alternate protein names: Helicase; Adenine Specific DNA Methyltransferase; Superfamily II DNA/RNA Helicase; Type III Restriction Protein Res Subunit; Helicase Domain-Containing Protein; Type III Restriction Res Subunit; Helicase Domain Protein; Endonuclease And Methylase LlaGI; N-6 DNA Methylase; N-6 DNA Methylase Family; DEAD/DEAH Box Helicase-Like; DNA Helicase Restriction Type III R Subunit; II DNA/RNA Helicase; ATP-Dependent RNA Helicase; Type II R-M System Protein; Restriction- System LlaBIII; Restriction/
Number of amino acids: Translated: 576; Mature: 575
Protein sequence:
>576_residues MTNAGFLEANTADGLRKCLADEFSSIHVFHLRGNQRTSGDVSRREGGKIFGGGSRAPIAISILVKNPDAAQHGQIYFHDI GDYLTREEKLVKISTFGSIEGITQVDGWRSITPDQHGDWLKQRDDRFGEYIALGDKDSKYDRKIFEIYSRGVATSRDAWC YNSSATTVSSNMTRMIDFYNTELYRFNKAFPGQEKKAREANVDDFVGSDPTQISWNRSLKQEFVKNRKCEYDAQSLTPSL YRPFAKQWLYFNRRLNDMVYQMPRIFPDATAGNLAIVTSGTGGRTAFTALMVNVIPSLHMADIDGSQCFPLYLYSEPADE ITEVSPNAELFEAPTAATAHRERRDALTDEGLTHFQAAYPGQAITKEDVFYYVYGLLHSPDYRERYGDTLRKELPRIPCV KTPADFWAFSKAGRKLADLHINYETVAMYPLQIEGGGLLLTDNDYRVEKMRYGKNGKDKDLTTLIYNDKITIKGIPLEAY EYVVNGKPALDWVVERQCVKVDDGKNGSGIVNDANDYAIETMNNPRYPLELFQRVVTVSLETMKIVKSLPHLDIQQPGQT VGQLMEAKDEPDALTA
Sequences:
>Translated_576_residues MTNAGFLEANTADGLRKCLADEFSSIHVFHLRGNQRTSGDVSRREGGKIFGGGSRAPIAISILVKNPDAAQHGQIYFHDI GDYLTREEKLVKISTFGSIEGITQVDGWRSITPDQHGDWLKQRDDRFGEYIALGDKDSKYDRKIFEIYSRGVATSRDAWC YNSSATTVSSNMTRMIDFYNTELYRFNKAFPGQEKKAREANVDDFVGSDPTQISWNRSLKQEFVKNRKCEYDAQSLTPSL YRPFAKQWLYFNRRLNDMVYQMPRIFPDATAGNLAIVTSGTGGRTAFTALMVNVIPSLHMADIDGSQCFPLYLYSEPADE ITEVSPNAELFEAPTAATAHRERRDALTDEGLTHFQAAYPGQAITKEDVFYYVYGLLHSPDYRERYGDTLRKELPRIPCV KTPADFWAFSKAGRKLADLHINYETVAMYPLQIEGGGLLLTDNDYRVEKMRYGKNGKDKDLTTLIYNDKITIKGIPLEAY EYVVNGKPALDWVVERQCVKVDDGKNGSGIVNDANDYAIETMNNPRYPLELFQRVVTVSLETMKIVKSLPHLDIQQPGQT VGQLMEAKDEPDALTA >Mature_575_residues TNAGFLEANTADGLRKCLADEFSSIHVFHLRGNQRTSGDVSRREGGKIFGGGSRAPIAISILVKNPDAAQHGQIYFHDIG DYLTREEKLVKISTFGSIEGITQVDGWRSITPDQHGDWLKQRDDRFGEYIALGDKDSKYDRKIFEIYSRGVATSRDAWCY NSSATTVSSNMTRMIDFYNTELYRFNKAFPGQEKKAREANVDDFVGSDPTQISWNRSLKQEFVKNRKCEYDAQSLTPSLY RPFAKQWLYFNRRLNDMVYQMPRIFPDATAGNLAIVTSGTGGRTAFTALMVNVIPSLHMADIDGSQCFPLYLYSEPADEI TEVSPNAELFEAPTAATAHRERRDALTDEGLTHFQAAYPGQAITKEDVFYYVYGLLHSPDYRERYGDTLRKELPRIPCVK TPADFWAFSKAGRKLADLHINYETVAMYPLQIEGGGLLLTDNDYRVEKMRYGKNGKDKDLTTLIYNDKITIKGIPLEAYE YVVNGKPALDWVVERQCVKVDDGKNGSGIVNDANDYAIETMNNPRYPLELFQRVVTVSLETMKIVKSLPHLDIQQPGQTV GQLMEAKDEPDALTA
Specific function: Unknown
COG id: COG4889
COG function: function code R; Predicted helicase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65038; Mature: 64907
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAGFLEANTADGLRKCLADEFSSIHVFHLRGNQRTSGDVSRREGGKIFGGGSRAPIAI CCCCCEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEEE SILVKNPDAAQHGQIYFHDIGDYLTREEKLVKISTFGSIEGITQVDGWRSITPDQHGDWL EEEEECCCCCCCCCEEEEEHHHHHCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCHH KQRDDRFGEYIALGDKDSKYDRKIFEIYSRGVATSRDAWCYNSSATTVSSNMTRMIDFYN HHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCEECCCHHHHHHHHC TELYRFNKAFPGQEKKAREANVDDFVGSDPTQISWNRSLKQEFVKNRKCEYDAQSLTPSL CEEEEECCCCCCCHHHHHCCCCHHHCCCCCCEEECCHHHHHHHHHCCCCCCCHHHCCHHH YRPFAKQWLYFNRRLNDMVYQMPRIFPDATAGNLAIVTSGTGGRTAFTALMVNVIPSLHM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEE ADIDGSQCFPLYLYSEPADEITEVSPNAELFEAPTAATAHRERRDALTDEGLTHFQAAYP ECCCCCCEEEEEEECCCHHHHHHCCCCCHHEECCCHHHHHHHHHHHHHHCCCHHHHHCCC GQAITKEDVFYYVYGLLHSPDYRERYGDTLRKELPRIPCVKTPADFWAFSKAGRKLADLH CCCCCHHHHHHEEHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEEE INYETVAMYPLQIEGGGLLLTDNDYRVEKMRYGKNGKDKDLTTLIYNDKITIKGIPLEAY ECEEEEEEEEEEECCCEEEEECCCCEEHHHHCCCCCCCCCEEEEEECCEEEEEECCHHHH EYVVNGKPALDWVVERQCVKVDDGKNGSGIVNDANDYAIETMNNPRYPLELFQRVVTVSL HHEECCCCHHHHHHHHHEEEECCCCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHH ETMKIVKSLPHLDIQQPGQTVGQLMEAKDEPDALTA HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TNAGFLEANTADGLRKCLADEFSSIHVFHLRGNQRTSGDVSRREGGKIFGGGSRAPIAI CCCCEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEEE SILVKNPDAAQHGQIYFHDIGDYLTREEKLVKISTFGSIEGITQVDGWRSITPDQHGDWL EEEEECCCCCCCCCEEEEEHHHHHCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCHH KQRDDRFGEYIALGDKDSKYDRKIFEIYSRGVATSRDAWCYNSSATTVSSNMTRMIDFYN HHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCEECCCHHHHHHHHC TELYRFNKAFPGQEKKAREANVDDFVGSDPTQISWNRSLKQEFVKNRKCEYDAQSLTPSL CEEEEECCCCCCCHHHHHCCCCHHHCCCCCCEEECCHHHHHHHHHCCCCCCCHHHCCHHH YRPFAKQWLYFNRRLNDMVYQMPRIFPDATAGNLAIVTSGTGGRTAFTALMVNVIPSLHM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEE ADIDGSQCFPLYLYSEPADEITEVSPNAELFEAPTAATAHRERRDALTDEGLTHFQAAYP ECCCCCCEEEEEEECCCHHHHHHCCCCCHHEECCCHHHHHHHHHHHHHHCCCHHHHHCCC GQAITKEDVFYYVYGLLHSPDYRERYGDTLRKELPRIPCVKTPADFWAFSKAGRKLADLH CCCCCHHHHHHEEHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEEE INYETVAMYPLQIEGGGLLLTDNDYRVEKMRYGKNGKDKDLTTLIYNDKITIKGIPLEAY ECEEEEEEEEEEECCCEEEEECCCCEEHHHHCCCCCCCCCEEEEEECCEEEEEECCHHHH EYVVNGKPALDWVVERQCVKVDDGKNGSGIVNDANDYAIETMNNPRYPLELFQRVVTVSL HHEECCCCHHHHHHHHHEEEECCCCCCCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHH ETMKIVKSLPHLDIQQPGQTVGQLMEAKDEPDALTA HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA