| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is dalD [H]
Identifier: 83719407
GI number: 83719407
Start: 809523
End: 810914
Strand: Reverse
Name: dalD [H]
Synonym: BTH_I0703
Alternate gene names: 83719407
Gene position: 810914-809523 (Counterclockwise)
Preceding gene: 83718942
Following gene: 83720348
Centisome position: 21.29
GC content: 73.06
Gene sequence:
>1392_bases ATGAGCAGTCCGTCCACCGCCGCGCCGGCGATCTTGCACATCGGCGTCGGCTCGTTTCATCGCGCGCATCAGGCGTGGTA TCTGCATCGCGTCAATGAGGCGTCGCCCGCCGCCGAGCGATGGTCGCTCGTCGTCGGCGACATCCGCGACGACATGCGCG CGGCCCGCGACGCGCTCGCCGCGCAGCACGGCGTCTACACGCTGGAGACGGTCACGCCGCAAGGCGAGCGGGCGTACGAG ACGATCCGCTCGATCGCGCGCGTGCTGCCGTGGTCGGCCGATCTGGCGGCGCTCGTCGACGCGGGCGCCGATCCGGCGTG CCGGATCGTGTCGTTCACGGTGACGGAAGGCGGCTATTACCTCGACGAGCACGACCGGCTCGACGCGGCGAACCCCGATC TCGCGGCCGACCTGCAAGGCGCGCGGCTCACGATCTACGGCGCGCTCGCGGCGCTCCTCGCCGAGCGCGTCGCGCGCGGC GCGGGGCCGATCACGCTGCTGAGCTGCGACAACCTGCGCAGCAACGGCGCGCGCTTTCGCGCCGGCATGCGCGAATTCCT GGCGCGGCGCGACCTCGTCGATCTGCTCGCGTGGTTCGACGCGAACGCCGCCTGCCCGAGCTCGATGGTCGACCGCATCA CGCCGCGCCCGACGCCCGACGTGCGCGAGCGCGTGCGCGCGGCCACCGGCATCGACGACGCGTGCCCTGTGATGGGCGAG GCGTTCATCCAGTGGGTGATCGAGGATCGCTTCGCGGCCGGCCGTCCCGCGTGGGAGAAGGCGGGCGCGGCGCTCGTCGA CGACGTTCATCCGTACGAGGAAGCGAAGATCCGGATCCTGAACGCGACGCACAGCTGCATCGCATGGGCGGGCACGCTCG CGGGCCACGCGTACATCCACGAAGGCACGCGCGACGCGGAGATCCGCCGCTTCGCGCACGCGTACGTGACCGACGACGTG ATCCCCTGCCTCACGCCGAGCCCGCTCGACCTCGCGCGCTACCGCGACGTCGTGCTCGAGCGCTTCGGCAATCCGCACAT CCGCGACACGAACCAGCGCGTGGCCGCCGACGGCTTCTCGAAGATTCCCGGCTTCATCGCGCCGACGCTCGCCGAAACGA TCGCGCGCGGCGTCGAGCCGGCGTCGACCGCGGTGCTGCCCGCGCTCTTCCTGCGCTTCCTGCAGCGCTGGGCGCAACGC GCGCTGCCGTACGCGTATCAGGACGGCGTGATGGACGAGCGCGTCGCGCGCGCGATCGCGGGCGCGGAAGATCCCGTCGC CGCGCTCGCGGCGCAACGGCCGCTCTGGGGCGCGCTCGCCGGCACGCCCGCGCTCGAGCGCGCGCTGCGCGCGGGCCTCG CGCGCGTCGACGCGTGGCTCGCGAGCCGCTGA
Upstream 100 bases:
>100_bases CGCCTTGACTTTCGCTCACCCGAATACGATCATTCGCTCATGTAAAGAGCAAATGATCTACAAAAATTCGGCCCGTCAGC CGGCCGACAGGAGACACGGG
Downstream 100 bases:
>100_bases GCGCCGCCCGCATCGCTCGGGTCAAATCGCCATTGGCACGGCGGCGAGCACGCGGCTAAAGTAGCGGCTTCCCGTCGACG CACCGCTTTTCGCCCATGTA
Product: mannitol dehydrogenase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MSSPSTAAPAILHIGVGSFHRAHQAWYLHRVNEASPAAERWSLVVGDIRDDMRAARDALAAQHGVYTLETVTPQGERAYE TIRSIARVLPWSADLAALVDAGADPACRIVSFTVTEGGYYLDEHDRLDAANPDLAADLQGARLTIYGALAALLAERVARG AGPITLLSCDNLRSNGARFRAGMREFLARRDLVDLLAWFDANAACPSSMVDRITPRPTPDVRERVRAATGIDDACPVMGE AFIQWVIEDRFAAGRPAWEKAGAALVDDVHPYEEAKIRILNATHSCIAWAGTLAGHAYIHEGTRDAEIRRFAHAYVTDDV IPCLTPSPLDLARYRDVVLERFGNPHIRDTNQRVAADGFSKIPGFIAPTLAETIARGVEPASTAVLPALFLRFLQRWAQR ALPYAYQDGVMDERVARAIAGAEDPVAALAAQRPLWGALAGTPALERALRAGLARVDAWLASR
Sequences:
>Translated_463_residues MSSPSTAAPAILHIGVGSFHRAHQAWYLHRVNEASPAAERWSLVVGDIRDDMRAARDALAAQHGVYTLETVTPQGERAYE TIRSIARVLPWSADLAALVDAGADPACRIVSFTVTEGGYYLDEHDRLDAANPDLAADLQGARLTIYGALAALLAERVARG AGPITLLSCDNLRSNGARFRAGMREFLARRDLVDLLAWFDANAACPSSMVDRITPRPTPDVRERVRAATGIDDACPVMGE AFIQWVIEDRFAAGRPAWEKAGAALVDDVHPYEEAKIRILNATHSCIAWAGTLAGHAYIHEGTRDAEIRRFAHAYVTDDV IPCLTPSPLDLARYRDVVLERFGNPHIRDTNQRVAADGFSKIPGFIAPTLAETIARGVEPASTAVLPALFLRFLQRWAQR ALPYAYQDGVMDERVARAIAGAEDPVAALAAQRPLWGALAGTPALERALRAGLARVDAWLASR >Mature_462_residues SSPSTAAPAILHIGVGSFHRAHQAWYLHRVNEASPAAERWSLVVGDIRDDMRAARDALAAQHGVYTLETVTPQGERAYET IRSIARVLPWSADLAALVDAGADPACRIVSFTVTEGGYYLDEHDRLDAANPDLAADLQGARLTIYGALAALLAERVARGA GPITLLSCDNLRSNGARFRAGMREFLARRDLVDLLAWFDANAACPSSMVDRITPRPTPDVRERVRAATGIDDACPVMGEA FIQWVIEDRFAAGRPAWEKAGAALVDDVHPYEEAKIRILNATHSCIAWAGTLAGHAYIHEGTRDAEIRRFAHAYVTDDVI PCLTPSPLDLARYRDVVLERFGNPHIRDTNQRVAADGFSKIPGFIAPTLAETIARGVEPASTAVLPALFLRFLQRWAQRA LPYAYQDGVMDERVARAIAGAEDPVAALAAQRPLWGALAGTPALERALRAGLARVDAWLASR
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788497, Length=362, Percent_Identity=36.1878453038674, Blast_Score=214, Evalue=1e-56, Organism=Escherichia coli, GI1790779, Length=361, Percent_Identity=36.01108033241, Blast_Score=206, Evalue=3e-54, Organism=Escherichia coli, GI1787823, Length=363, Percent_Identity=35.8126721763085, Blast_Score=206, Evalue=3e-54, Organism=Escherichia coli, GI48994885, Length=458, Percent_Identity=26.4192139737991, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1790028, Length=216, Percent_Identity=25, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6324401, Length=422, Percent_Identity=36.9668246445498, Blast_Score=264, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6320765, Length=422, Percent_Identity=36.9668246445498, Blast_Score=264, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.11 [H]
Molecular weight: Translated: 50286; Mature: 50155
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPSTAAPAILHIGVGSFHRAHQAWYLHRVNEASPAAERWSLVVGDIRDDMRAARDALA CCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AQHGVYTLETVTPQGERAYETIRSIARVLPWSADLAALVDAGADPACRIVSFTVTEGGYY HHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEEECCCEE LDEHDRLDAANPDLAADLQGARLTIYGALAALLAERVARGAGPITLLSCDNLRSNGARFR ECCCCCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH AGMREFLARRDLVDLLAWFDANAACPSSMVDRITPRPTPDVRERVRAATGIDDACPVMGE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHH AFIQWVIEDRFAAGRPAWEKAGAALVDDVHPYEEAKIRILNATHSCIAWAGTLAGHAYIH HHHHHHHHHHHCCCCCCHHHCCCHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCHHEE EGTRDAEIRRFAHAYVTDDVIPCLTPSPLDLARYRDVVLERFGNPHIRDTNQRVAADGFS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHH KIPGFIAPTLAETIARGVEPASTAVLPALFLRFLQRWAQRALPYAYQDGVMDERVARAIA HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH GAEDPVAALAAQRPLWGALAGTPALERALRAGLARVDAWLASR CCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSPSTAAPAILHIGVGSFHRAHQAWYLHRVNEASPAAERWSLVVGDIRDDMRAARDALA CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AQHGVYTLETVTPQGERAYETIRSIARVLPWSADLAALVDAGADPACRIVSFTVTEGGYY HHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEEEEECCCEE LDEHDRLDAANPDLAADLQGARLTIYGALAALLAERVARGAGPITLLSCDNLRSNGARFR ECCCCCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH AGMREFLARRDLVDLLAWFDANAACPSSMVDRITPRPTPDVRERVRAATGIDDACPVMGE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHH AFIQWVIEDRFAAGRPAWEKAGAALVDDVHPYEEAKIRILNATHSCIAWAGTLAGHAYIH HHHHHHHHHHHCCCCCCHHHCCCHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCHHEE EGTRDAEIRRFAHAYVTDDVIPCLTPSPLDLARYRDVVLERFGNPHIRDTNQRVAADGFS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHH KIPGFIAPTLAETIARGVEPASTAVLPALFLRFLQRWAQRALPYAYQDGVMDERVARAIA HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH GAEDPVAALAAQRPLWGALAGTPALERALRAGLARVDAWLASR CCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]