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The map label for this gene is ompW [C]

Identifier: 83719376

GI number: 83719376

Start: 2561036

End: 2561680

Strand: Direct

Name: ompW [C]

Synonym: BTH_I2273

Alternate gene names: 83719376

Gene position: 2561036-2561680 (Clockwise)

Preceding gene: 83721586

Following gene: 83719114

Centisome position: 67.23

GC content: 61.86

Gene sequence:

>645_bases
ATGCGTCGTCAAGCAATTCGTACTTGCACCACCGCCATCGCCTGCGCAGCCGGTCTTGCGATGATTCCGTCGCTATCGCA
TGCGGCTTCGCCCGGAGAGGGCATCAATCAAGGCGACATCATTGCGCGCGTTCGCGGGATCAGCATCATGCCGGACGAGC
GCACGAGCAATACGTTGTCGGCGCTGAACGTGGGCGTGAACAATGCGATCGTCCCGGAGCTCGATTTCACGTACATGATT
CGCGATTATCTGGGCGTCGAGCTGATCCTCGGCACGTCGCGGCATCAGATCACGTCGTCGCTCGGCGATCTCGGCGGCGT
CGGCGTGCTGCCGCCGACGCTGTTGCTGCAGTACCACTTCAATCACGCCGGCAAGGTGCGCCCGTATGTCGGCGCGGGTA
TCAACTACACGCTGTTCTACAACAACGGGTTGCACGCGGGCGGCGAGGGGATCGGGATCAACAACCACAGCTTTGGTCCC
GCGCTGCAGTTCGGCGTCGACGTGCAAGTGACGAAGAAGGTGTTCGTCAACGTCGACGTGAAGAAGATCTGGATGCACAC
CGACGCGACGCTCGGCGGCCAGCCGCTCGGCCGGCTTAACATCGATCCGCTCGTCGTGGGCGTCGGCGTCGGGATGAAGT
TCTAA

Upstream 100 bases:

>100_bases
AAACCGTCCCACTTTCTCGCTGTCGTGATGCTTGATGTCGGTCAATATAAGTGGGGAACCATCCCCTGAGAATGAAGCCT
GTTCTTAGGGAGTCCTTATC

Downstream 100 bases:

>100_bases
GAATCGGCAGAATCAAAAAGTGTTGGGGTTGGCGGCACGGCTTCATGCGTGCCGTCCTTTTTTTTGATGCATTTGTTTCG
GCATGCTGATCGAATGCGCA

Product: OmpW family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MRRQAIRTCTTAIACAAGLAMIPSLSHAASPGEGINQGDIIARVRGISIMPDERTSNTLSALNVGVNNAIVPELDFTYMI
RDYLGVELILGTSRHQITSSLGDLGGVGVLPPTLLLQYHFNHAGKVRPYVGAGINYTLFYNNGLHAGGEGIGINNHSFGP
ALQFGVDVQVTKKVFVNVDVKKIWMHTDATLGGQPLGRLNIDPLVVGVGVGMKF

Sequences:

>Translated_214_residues
MRRQAIRTCTTAIACAAGLAMIPSLSHAASPGEGINQGDIIARVRGISIMPDERTSNTLSALNVGVNNAIVPELDFTYMI
RDYLGVELILGTSRHQITSSLGDLGGVGVLPPTLLLQYHFNHAGKVRPYVGAGINYTLFYNNGLHAGGEGIGINNHSFGP
ALQFGVDVQVTKKVFVNVDVKKIWMHTDATLGGQPLGRLNIDPLVVGVGVGMKF
>Mature_214_residues
MRRQAIRTCTTAIACAAGLAMIPSLSHAASPGEGINQGDIIARVRGISIMPDERTSNTLSALNVGVNNAIVPELDFTYMI
RDYLGVELILGTSRHQITSSLGDLGGVGVLPPTLLLQYHFNHAGKVRPYVGAGINYTLFYNNGLHAGGEGIGINNHSFGP
ALQFGVDVQVTKKVFVNVDVKKIWMHTDATLGGQPLGRLNIDPLVVGVGVGMKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=209, Percent_Identity=37.3205741626794, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22734; Mature: 22734

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQAIRTCTTAIACAAGLAMIPSLSHAASPGEGINQGDIIARVRGISIMPDERTSNTLS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCHHH
ALNVGVNNAIVPELDFTYMIRDYLGVELILGTSRHQITSSLGDLGGVGVLPPTLLLQYHF
HEECCCCCCCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCCHHHEEEEEC
NHAGKVRPYVGAGINYTLFYNNGLHAGGEGIGINNHSFGPALQFGVDVQVTKKVFVNVDV
CCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCE
KKIWMHTDATLGGQPLGRLNIDPLVVGVGVGMKF
EEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRRQAIRTCTTAIACAAGLAMIPSLSHAASPGEGINQGDIIARVRGISIMPDERTSNTLS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCHHH
ALNVGVNNAIVPELDFTYMIRDYLGVELILGTSRHQITSSLGDLGGVGVLPPTLLLQYHF
HEECCCCCCCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCCHHHEEEEEC
NHAGKVRPYVGAGINYTLFYNNGLHAGGEGIGINNHSFGPALQFGVDVQVTKKVFVNVDV
CCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCE
KKIWMHTDATLGGQPLGRLNIDPLVVGVGVGMKF
EEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]