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The map label for this gene is nmpC [C]

Identifier: 83719322

GI number: 83719322

Start: 1790468

End: 1791607

Strand: Reverse

Name: nmpC [C]

Synonym: BTH_I1592

Alternate gene names: 83719322

Gene position: 1791607-1790468 (Counterclockwise)

Preceding gene: 83719084

Following gene: 83719437

Centisome position: 47.03

GC content: 63.68

Gene sequence:

>1140_bases
ATGAAAAAGACCCTCATCGTCGCTGCTCTCTCTGGCGTCTTCGCGACGGCCGCTCACGCGCAAAGCAGCGTGACGCTGTA
CGGCCTCATCGACGCCGGCATCACCTACACGAACAACCAAGGCGGCCACAGTGCATGGTCGCAGTCCAGCGGCTCGGTCA
ACGGCAGCCGCTGGGGCCTGCGCGGCGCCGAAGACCTCGGCGGCGGCCTGAAGGCGATTTTTGTGTTGGAAAACGGCTTC
GGCATCAATAACGGCACGCTCAAGCAGAACGGCCGCGAGTTCGGCCGCCAGGCGTTCGTCGGTCTGTCGCACGATCAATA
CGGCTCCCTGACGCTCGGCCGTCAGTACGATAGCGTCGTCGACTACATCGGGCCGCTGTCGCTGACCGGCACGCAATTCG
GCGGCGTGCAGTTTGCCCACCCGTTCGACAACGACAACCTGAACAACTCGTTCCGGATCAACAACGCGGTCAAGTACACG
AGCGTGAACTGGGCCGGCCTGAAGTTCGGCGCGTTGTACGGCTTCTCGAACAGCAACGAGTTCGCGAACAACCGTGCGTA
TAGCGCGGGCGTGTCGTATAGCTACGCCGGCTTCAACGTCGGCGCCGGCTACCTGCAGTTGAACAACGACTTCGGCCCGA
CCGTGTCGAACGCTTCGGGCGCGGTCGCGCTCGACAATACGTTCGTCGGCAAGCGCCAGCGCGTGTTCGGCGGCGGCCTG
AATTACACGTACGGCCCGGCGACGGCCGGCTTCGTGTTCACGCAATCGCGCGTCAATCGCGCGACGGCGATCAGCTCGGG
CGCATCGGGCGTGTCGAGCGGCATCGCGCTCGACGGCACGTTCATGCGTTTCAACAACTACGAAGTGAACGCGCGCTACG
CGATCACGCCGGCATGGACGGTCGCGGGCTCGTACACGTACACCGCCGGCTTCATCGAGAACCACCACCCGGGCTGGAAT
CAGTTCAACCTGCAAACGGCCTACGCGCTGTCGAAGCGCACGGACGTGTACCTGCAAGGCGTGTATCAGAAGGTCAACAG
CGACGGCACGGGCCTCGGCGCCTATATCAACGGCGTCGGCGGCATGTCGTCGAGCGAGAAGCAGATCGCCGTCACGGCAG
GCCTGCGTCATCGCTTCTAA

Upstream 100 bases:

>100_bases
CGAGACATGCCCCGGCTCCGTTTCTCGCAGCAGCAGCCGGGAACATCGAAGAACAGGACAGATATCGTCATCCACCCTGT
TTCGGACGGAGATAAACCCA

Downstream 100 bases:

>100_bases
CCGGTTCTTCGGCACCGACCTAGAGCGCCCCGCTTGGGGCGCTTTTTTTGTCCGATCGTCTCCGGCCGGGCGAGCACGCG
GCGGAGCACCGCGCGGCATG

Product: outer membrane porin OpcP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKKTLIVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQGGHSAWSQSSGSVNGSRWGLRGAEDLGGGLKAIFVLENGF
GINNGTLKQNGREFGRQAFVGLSHDQYGSLTLGRQYDSVVDYIGPLSLTGTQFGGVQFAHPFDNDNLNNSFRINNAVKYT
SVNWAGLKFGALYGFSNSNEFANNRAYSAGVSYSYAGFNVGAGYLQLNNDFGPTVSNASGAVALDNTFVGKRQRVFGGGL
NYTYGPATAGFVFTQSRVNRATAISSGASGVSSGIALDGTFMRFNNYEVNARYAITPAWTVAGSYTYTAGFIENHHPGWN
QFNLQTAYALSKRTDVYLQGVYQKVNSDGTGLGAYINGVGGMSSSEKQIAVTAGLRHRF

Sequences:

>Translated_379_residues
MKKTLIVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQGGHSAWSQSSGSVNGSRWGLRGAEDLGGGLKAIFVLENGF
GINNGTLKQNGREFGRQAFVGLSHDQYGSLTLGRQYDSVVDYIGPLSLTGTQFGGVQFAHPFDNDNLNNSFRINNAVKYT
SVNWAGLKFGALYGFSNSNEFANNRAYSAGVSYSYAGFNVGAGYLQLNNDFGPTVSNASGAVALDNTFVGKRQRVFGGGL
NYTYGPATAGFVFTQSRVNRATAISSGASGVSSGIALDGTFMRFNNYEVNARYAITPAWTVAGSYTYTAGFIENHHPGWN
QFNLQTAYALSKRTDVYLQGVYQKVNSDGTGLGAYINGVGGMSSSEKQIAVTAGLRHRF
>Mature_379_residues
MKKTLIVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQGGHSAWSQSSGSVNGSRWGLRGAEDLGGGLKAIFVLENGF
GINNGTLKQNGREFGRQAFVGLSHDQYGSLTLGRQYDSVVDYIGPLSLTGTQFGGVQFAHPFDNDNLNNSFRINNAVKYT
SVNWAGLKFGALYGFSNSNEFANNRAYSAGVSYSYAGFNVGAGYLQLNNDFGPTVSNASGAVALDNTFVGKRQRVFGGGL
NYTYGPATAGFVFTQSRVNRATAISSGASGVSSGIALDGTFMRFNNYEVNARYAITPAWTVAGSYTYTAGFIENHHPGWN
QFNLQTAYALSKRTDVYLQGVYQKVNSDGTGLGAYINGVGGMSSSEKQIAVTAGLRHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40251; Mature: 40251

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLIVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQGGHSAWSQSSGSVNGSRWGL
CCCEEEEEEHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCC
RGAEDLGGGLKAIFVLENGFGINNGTLKQNGREFGRQAFVGLSHDQYGSLTLGRQYDSVV
CCHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHEEEECCCCCCCCEEECCCHHHHH
DYIGPLSLTGTQFGGVQFAHPFDNDNLNNSFRINNAVKYTSVNWAGLKFGALYGFSNSNE
HHHCCCEECCCCCCCEEEECCCCCCCCCCEEEECCEEEEEECCCCCEEEEEEEECCCCCC
FANNRAYSAGVSYSYAGFNVGAGYLQLNNDFGPTVSNASGAVALDNTFVGKRQRVFGGGL
CCCCCEEECCCEEEECCEECCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEECCCC
NYTYGPATAGFVFTQSRVNRATAISSGASGVSSGIALDGTFMRFNNYEVNARYAITPAWT
CCCCCCCCCCEEEEHHHCCHHHEECCCCCCCCCCEEECEEEEEECCEEEEEEEEECEEEE
VAGSYTYTAGFIENHHPGWNQFNLQTAYALSKRTDVYLQGVYQKVNSDGTGLGAYINGVG
ECCCEEEEECCCCCCCCCCCEEEEEEEEEHHCCCHHHHHHHHHHHCCCCCEEEEEEECCC
GMSSSEKQIAVTAGLRHRF
CCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKKTLIVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQGGHSAWSQSSGSVNGSRWGL
CCCEEEEEEHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCC
RGAEDLGGGLKAIFVLENGFGINNGTLKQNGREFGRQAFVGLSHDQYGSLTLGRQYDSVV
CCHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHEEEECCCCCCCCEEECCCHHHHH
DYIGPLSLTGTQFGGVQFAHPFDNDNLNNSFRINNAVKYTSVNWAGLKFGALYGFSNSNE
HHHCCCEECCCCCCCEEEECCCCCCCCCCEEEECCEEEEEECCCCCEEEEEEEECCCCCC
FANNRAYSAGVSYSYAGFNVGAGYLQLNNDFGPTVSNASGAVALDNTFVGKRQRVFGGGL
CCCCCEEECCCEEEECCEECCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEECCCC
NYTYGPATAGFVFTQSRVNRATAISSGASGVSSGIALDGTFMRFNNYEVNARYAITPAWT
CCCCCCCCCCEEEEHHHCCHHHEECCCCCCCCCCEEECEEEEEECCEEEEEEEEECEEEE
VAGSYTYTAGFIENHHPGWNQFNLQTAYALSKRTDVYLQGVYQKVNSDGTGLGAYINGVG
ECCCEEEEECCCCCCCCCCCEEEEEEEEEHHCCCHHHHHHHHHHHCCCCCEEEEEEECCC
GMSSSEKQIAVTAGLRHRF
CCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]