| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719286
Identifier: 83719286
GI number: 83719286
Start: 1179195
End: 1179782
Strand: Reverse
Name: 83719286
Synonym: BTH_I1036
Alternate gene names: NA
Gene position: 1179782-1179195 (Counterclockwise)
Preceding gene: 83720351
Following gene: 83718593
Centisome position: 30.97
GC content: 66.33
Gene sequence:
>588_bases ATGAAGAGCGTCTGCGTGTATTGCGGTTCGGCCAACGGCGTGAAACCCGTCTACGCGGAAGCGGCGCGCGCGTTCGGCCG CGCGCTCGCGAACGCCGGCCTCACGCTCGTCTACGGCGGCGGACGCGTCGGCCTGATGGGCGTGATCGCCGACGAGGTGA TCGCGTCGGGCGGACGCGCGATCGGCGTCATCACGGAGCTGCTCTACGACAAGGAAGTCGGCCACACCGGCTTGACCGAG CTGCACGTCGTGCCCGACATGCATCATCGCAAGAAGATGATGGCCGAGCTCGCGGACGCGTTCGTCGCGATGCCGGGCGG CGCGGGCACGCTCGAGGAGTTCTTCGAGGTCTACACGTGGGCGCAGCTCGGCTATCATCGCAAGCCCGTCGCGCTCTACA ACGTCGACGCGTTCTACCAGCCGCTCATCGCGCTCCTCGAGCACACCGTCGAAGAAGGCTTCATGCAGCGCACGTATTTC GATGCGCTGTGCATCGACGCCGCGCCCGATGCGCTCATCGATCAGCTCGTCCGGTATCGTCCGCCCGCGCGCGACAAATG GACGTTCGTGTCGGAGCAGGAAGCCTGA
Upstream 100 bases:
>100_bases GGCAGATCTTCGACGATCTCGTATCGGGCAAGCTGCCGAAGCGCGAGTTCCACGATTACCTGCCGCCGCGCGACGGTTCG CCGCGCAAGGACGCGAAGCA
Downstream 100 bases:
>100_bases GCCGGCGCGCCGCGCCGTTGACGCGCGGCGTGAGCGCGCGAGTGGCCTCGCCCGGCCTTTGCTGATGCGGCGGCGCGCGC TCGACGCTTCGTGCGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKSVCVYCGSANGVKPVYAEAARAFGRALANAGLTLVYGGGRVGLMGVIADEVIASGGRAIGVITELLYDKEVGHTGLTE LHVVPDMHHRKKMMAELADAFVAMPGGAGTLEEFFEVYTWAQLGYHRKPVALYNVDAFYQPLIALLEHTVEEGFMQRTYF DALCIDAAPDALIDQLVRYRPPARDKWTFVSEQEA
Sequences:
>Translated_195_residues MKSVCVYCGSANGVKPVYAEAARAFGRALANAGLTLVYGGGRVGLMGVIADEVIASGGRAIGVITELLYDKEVGHTGLTE LHVVPDMHHRKKMMAELADAFVAMPGGAGTLEEFFEVYTWAQLGYHRKPVALYNVDAFYQPLIALLEHTVEEGFMQRTYF DALCIDAAPDALIDQLVRYRPPARDKWTFVSEQEA >Mature_195_residues MKSVCVYCGSANGVKPVYAEAARAFGRALANAGLTLVYGGGRVGLMGVIADEVIASGGRAIGVITELLYDKEVGHTGLTE LHVVPDMHHRKKMMAELADAFVAMPGGAGTLEEFFEVYTWAQLGYHRKPVALYNVDAFYQPLIALLEHTVEEGFMQRTYF DALCIDAAPDALIDQLVRYRPPARDKWTFVSEQEA
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LOG family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322406, Length=207, Percent_Identity=41.0628019323672, Blast_Score=162, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 21331; Mature: 21331
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVCVYCGSANGVKPVYAEAARAFGRALANAGLTLVYGGGRVGLMGVIADEVIASGGRA CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCH IGVITELLYDKEVGHTGLTELHVVPDMHHRKKMMAELADAFVAMPGGAGTLEEFFEVYTW HHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AQLGYHRKPVALYNVDAFYQPLIALLEHTVEEGFMQRTYFDALCIDAAPDALIDQLVRYR HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PPARDKWTFVSEQEA CCCCCCCCCCCCCCC >Mature Secondary Structure MKSVCVYCGSANGVKPVYAEAARAFGRALANAGLTLVYGGGRVGLMGVIADEVIASGGRA CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCH IGVITELLYDKEVGHTGLTELHVVPDMHHRKKMMAELADAFVAMPGGAGTLEEFFEVYTW HHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AQLGYHRKPVALYNVDAFYQPLIALLEHTVEEGFMQRTYFDALCIDAAPDALIDQLVRYR HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PPARDKWTFVSEQEA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2116366 [H]