| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is ygfF [H]
Identifier: 83718593
GI number: 83718593
Start: 1178080
End: 1178865
Strand: Reverse
Name: ygfF [H]
Synonym: BTH_I1035
Alternate gene names: 83718593
Gene position: 1178865-1178080 (Counterclockwise)
Preceding gene: 83719286
Following gene: 83719081
Centisome position: 30.95
GC content: 73.16
Gene sequence:
>786_bases GTGCCGCCCGGGTCGAGGTCCAAGCTGATGACGAACCCGCCAGCCAAAGCCGTCCTCATCACCGGCGCGAGCCGCGGCAT CGGCCGCGCAACCGCGCTTCTCGCCGCCGCGCACGGCTGGTCGGTCGGCATCAACTACGCGCGCGACGCGGCAGCCGCCG AAGCAACCGCCGACGCGGTGCGCGCCGCCGGCGCGCAAGCGTGCATCGTGCGCGGCGACGTCGCGAACGAAACCGACGTG ATCGCCATGTTCGACGCGGTGCAGTCCGCGTTCGGCCGGCTCGACGCGCTCGTCAACAACGCGGGAATCGTCGCGCCGTC GCTGCCGCTCGCCGACATGGACGTCGCACGCCTGAAGCGCGTATTCGACACCAACGTGCTCGGCGCGTATCTGTGCGCGC GCGAAGCCGCGCGGCGGCTGTCGACCGATCGCGGCGGCATGGGCGGCGCGATCGCCAACGTCTCGTCGATCGCCGCGCGG CTCGGCTCGCCGAACGAGTACGTCGACTATGCGGGTTCGAAGGGCGCGGTCGACACGCTGACGCTCGGCCTCGCGAAGGA GCTCGGCCCGCGCGGCGTACGCGTGAATGCGGTTCGCCCGGGCCTCATCGCGACCGAGATCCATGCGAGCGGCGGCCAGC CCGGCCGTGCCGAGCGACTCGGCGCGCAGACGCCGCTCGGCCGCGCAGGCGAAGCAGACGAGGTGGCCGAGGCGATCGTC TGGCTGCTGAGCGACGCCGCGTCGTACGTGACGGGCGCGCTGCTCGACGTCGGCGGCGGGCGCTGA
Upstream 100 bases:
>100_bases TTCCGTTGCGCAGCATCCGGCCGCGACGCGTGCAGTCGCCCACGGCCGCGTAGCACGGGGCCTGTCGCGGCGCTCTTTTC CCTTTTCCGCCCGAACGCGC
Downstream 100 bases:
>100_bases CGCGCGGCCGGCGGCGCATCGGGCGCGCCGCTGTCGGCCGGCGGGCGTCGCTCGCGTGCGAACCAGGCCATCCCGCGCAT CAGGGCACCGAACTTTCAGG
Product: glucose-1-dehydrogenase
Products: D-glucono-1,5-lactone; NADH; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MPPGSRSKLMTNPPAKAVLITGASRGIGRATALLAAAHGWSVGINYARDAAAAEATADAVRAAGAQACIVRGDVANETDV IAMFDAVQSAFGRLDALVNNAGIVAPSLPLADMDVARLKRVFDTNVLGAYLCAREAARRLSTDRGGMGGAIANVSSIAAR LGSPNEYVDYAGSKGAVDTLTLGLAKELGPRGVRVNAVRPGLIATEIHASGGQPGRAERLGAQTPLGRAGEADEVAEAIV WLLSDAASYVTGALLDVGGGR
Sequences:
>Translated_261_residues MPPGSRSKLMTNPPAKAVLITGASRGIGRATALLAAAHGWSVGINYARDAAAAEATADAVRAAGAQACIVRGDVANETDV IAMFDAVQSAFGRLDALVNNAGIVAPSLPLADMDVARLKRVFDTNVLGAYLCAREAARRLSTDRGGMGGAIANVSSIAAR LGSPNEYVDYAGSKGAVDTLTLGLAKELGPRGVRVNAVRPGLIATEIHASGGQPGRAERLGAQTPLGRAGEADEVAEAIV WLLSDAASYVTGALLDVGGGR >Mature_260_residues PPGSRSKLMTNPPAKAVLITGASRGIGRATALLAAAHGWSVGINYARDAAAAEATADAVRAAGAQACIVRGDVANETDVI AMFDAVQSAFGRLDALVNNAGIVAPSLPLADMDVARLKRVFDTNVLGAYLCAREAARRLSTDRGGMGGAIANVSSIAARL GSPNEYVDYAGSKGAVDTLTLGLAKELGPRGVRVNAVRPGLIATEIHASGGQPGRAERLGAQTPLGRAGEADEVAEAIVW LLSDAASYVTGALLDVGGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=36.3265306122449, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI7705925, Length=254, Percent_Identity=35.4330708661417, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=30.6513409961686, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI109715829, Length=239, Percent_Identity=30.9623430962343, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI59889578, Length=199, Percent_Identity=35.1758793969849, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI10190704, Length=252, Percent_Identity=32.1428571428571, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=30.1587301587302, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI4758504, Length=252, Percent_Identity=28.968253968254, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=30.4878048780488, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI31542939, Length=201, Percent_Identity=31.3432835820896, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI40254986, Length=252, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=53.4979423868313, Blast_Score=276, Evalue=9e-76, Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=35.3658536585366, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=34.412955465587, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1787335, Length=252, Percent_Identity=35.3174603174603, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=34.6938775510204, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1790717, Length=246, Percent_Identity=30.8943089430894, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=34.9593495934959, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=30, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1789057, Length=200, Percent_Identity=30, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=29.3172690763052, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=29.6875, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1786812, Length=264, Percent_Identity=32.1969696969697, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787891, Length=249, Percent_Identity=30.9236947791165, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787526, Length=249, Percent_Identity=25.3012048192771, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=37.8486055776892, Blast_Score=134, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71994600, Length=254, Percent_Identity=35.8267716535433, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=35.7723577235772, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=35.2459016393443, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI72000259, Length=272, Percent_Identity=34.5588235294118, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=34.8484848484849, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=32.3308270676692, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=32.5581395348837, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=33.7164750957854, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17544670, Length=260, Percent_Identity=31.9230769230769, Blast_Score=98, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=32.520325203252, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17562906, Length=266, Percent_Identity=31.9548872180451, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=30.859375, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562904, Length=260, Percent_Identity=29.6153846153846, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=31.9230769230769, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17565030, Length=260, Percent_Identity=32.3076923076923, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=32.0610687022901, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=32.8185328185328, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17560332, Length=271, Percent_Identity=30.6273062730627, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=31.4176245210728, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=31.8007662835249, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=31.7647058823529, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=31.9066147859922, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=30.9433962264151, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=30.3370786516854, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17538182, Length=201, Percent_Identity=32.8358208955224, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=28, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17561272, Length=249, Percent_Identity=30.9236947791165, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=31.3432835820896, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71982365, Length=200, Percent_Identity=30.5, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17555612, Length=205, Percent_Identity=31.7073170731707, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17558628, Length=197, Percent_Identity=30.9644670050761, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=253, Percent_Identity=30.0395256916996, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323882, Length=233, Percent_Identity=33.0472103004292, Blast_Score=79, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6322861, Length=193, Percent_Identity=29.5336787564767, Blast_Score=69, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6322226, Length=196, Percent_Identity=27.0408163265306, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=38.2470119521912, Blast_Score=138, Evalue=4e-33, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=36.8627450980392, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=39.2857142857143, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI28571526, Length=258, Percent_Identity=37.5968992248062, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI24644337, Length=175, Percent_Identity=41.1428571428571, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=33.2, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24643142, Length=262, Percent_Identity=32.0610687022901, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=31.8725099601594, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI17737361, Length=230, Percent_Identity=31.304347826087, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24641232, Length=206, Percent_Identity=32.5242718446602, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI116007236, Length=239, Percent_Identity=28.4518828451883, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI281364494, Length=201, Percent_Identity=31.3432835820896, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28571387, Length=241, Percent_Identity=29.045643153527, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24648693, Length=206, Percent_Identity=30.0970873786408, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI21355889, Length=206, Percent_Identity=30.0970873786408, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24584752, Length=196, Percent_Identity=30.6122448979592, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24641388, Length=203, Percent_Identity=32.512315270936, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI21357673, Length=204, Percent_Identity=28.4313725490196, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.47
Molecular weight: Translated: 26426; Mature: 26295
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPGSRSKLMTNPPAKAVLITGASRGIGRATALLAAAHGWSVGINYARDAAAAEATADAV CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH RAAGAQACIVRGDVANETDVIAMFDAVQSAFGRLDALVNNAGIVAPSLPLADMDVARLKR HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VFDTNVLGAYLCAREAARRLSTDRGGMGGAIANVSSIAARLGSPNEYVDYAGSKGAVDTL HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHH TLGLAKELGPRGVRVNAVRPGLIATEIHASGGQPGRAERLGAQTPLGRAGEADEVAEAIV HHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHH WLLSDAASYVTGALLDVGGGR HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PPGSRSKLMTNPPAKAVLITGASRGIGRATALLAAAHGWSVGINYARDAAAAEATADAV CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH RAAGAQACIVRGDVANETDVIAMFDAVQSAFGRLDALVNNAGIVAPSLPLADMDVARLKR HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VFDTNVLGAYLCAREAARRLSTDRGGMGGAIANVSSIAARLGSPNEYVDYAGSKGAVDTL HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHH TLGLAKELGPRGVRVNAVRPGLIATEIHASGGQPGRAERLGAQTPLGRAGEADEVAEAIV HHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHH WLLSDAASYVTGALLDVGGGR HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-D-glucose; NAD+; NADP+
Specific reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 7764507 [H]