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The map label for this gene is yrbD [C]

Identifier: 83719153

GI number: 83719153

Start: 3440316

End: 3440846

Strand: Reverse

Name: yrbD [C]

Synonym: BTH_I3002

Alternate gene names: 83719153

Gene position: 3440846-3440316 (Counterclockwise)

Preceding gene: 83719902

Following gene: 83718408

Centisome position: 90.33

GC content: 63.84

Gene sequence:

>531_bases
ATGACGATGAAAAAGACTGCTCTCGACTTCTGGGTCGGCCTCTTCGTAGTGTTGGGATTTCTCGCGTTGCTGTTTCTCGC
GCTGAAAGTCGGCAACATGAGCTCGCTGTCGTTTCAGCCGACTTACGCGGTGAAGATGAAGTTCGACAACATCGGCGGCC
TGAAGCCGCGCGCGGCCGTGAAAAGCGCGGGCGTCGTGGTCGGGCGCGTGAAGACGATCGGCTTCGACACGAACACCTAC
CAGGCGCTCGTCACGATCGATCTCGACAAGCAGTACCAGTTTCCGAAGGATTCGTCGGCGAAGATCCTGACGTCGGGCCT
GCTCGGCGAGCAGTACATCGGCCTCGATCCGGGCGGCGACACGGAAATGCTGAAGGCGGGCGATACGATCACGATGACGC
AGTCGGCGATCGTGCTCGAGAACCTGATCGGCCAGTTCCTCTACAGCAAGGCCGCGGACGCGGGCGGCGCGAAGCCGGCC
GCCGCGTCGGGCGCGCCCGCGCCGGCCGCGTCGGGCGCGGCGGCACATTGA

Upstream 100 bases:

>100_bases
GTCGCACGCGACGACCAAGACAGTCGTGTACGCGTCGCTTGCCGTGCTCGGCCTCGATTTCCTGCTGACCGCGTTGATGT
TCAGCTAAGCCTTTTCTGGG

Downstream 100 bases:

>100_bases
ACGCCGCGCGAGCGGCATACGAGAGAAGAAGCGAGGGGAAGAACATCATGCAGACGATCCGCATCAGCCAAGCGGTGCTG
GCGGTCACGGCCGCCGCGGC

Product: ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTMKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKSAGVVVGRVKTIGFDTNTY
QALVTIDLDKQYQFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKAGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPA
AASGAPAPAASGAAAH

Sequences:

>Translated_176_residues
MTMKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKSAGVVVGRVKTIGFDTNTY
QALVTIDLDKQYQFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKAGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPA
AASGAPAPAASGAAAH
>Mature_175_residues
TMKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKSAGVVVGRVKTIGFDTNTYQ
ALVTIDLDKQYQFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKAGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAA
ASGAPAPAASGAAAH

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=171, Percent_Identity=48.5380116959064, Blast_Score=139, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 18337; Mature: 18206

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHH
KSAGVVVGRVKTIGFDTNTYQALVTIDLDKQYQFPKDSSAKILTSGLLGEQYIGLDPGGD
HHCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCEECCCCCCC
TEMLKAGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAAASGAPAPAASGAAAH
HHEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TMKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHH
KSAGVVVGRVKTIGFDTNTYQALVTIDLDKQYQFPKDSSAKILTSGLLGEQYIGLDPGGD
HHCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCEECCCCCCC
TEMLKAGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAAASGAPAPAASGAAAH
HHEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]