| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83719123
Identifier: 83719123
GI number: 83719123
Start: 2901546
End: 2902424
Strand: Reverse
Name: 83719123
Synonym: BTH_I2543
Alternate gene names: NA
Gene position: 2902424-2901546 (Counterclockwise)
Preceding gene: 83719116
Following gene: 83718419
Centisome position: 76.2
GC content: 74.97
Gene sequence:
>879_bases TTGCTGATCGGGATCGCGATCCTGCTCGGCATTTACGCGTGGCTGCTCGGGCGCAAGCCGGCGCCCGTCGCGCCGGGCGC CGCGCCCGCCGTCGCGACGGCGTTGGTGCCCGTCGTCGTCGCGACGCGCGCGCTGCCCGCCGGGCAGCCGATTCCCGCCG ATGCGCTGAAAGTGCAGCAGACGCCGGCGCCCATCGCCGGCGCCTTCCCTAATCCAACCCTCGTCACGGGCCGCATCCCG GCGAACGACATCGTCGCGCAGGCTCCGGTGCTCGAGAGCGAGCTGATGTCCGGCCTCGCCGACCAGATCGCGCCCGGCGA GCGCGCGGTCGCGATCAAGGTCGACGACACGAACGCGGTGGGCAACCGGCTGCGTCCCGGAAACTTCGTCGACGTGTTCG TGAACCTGAAGCGCGAAAGCGGCTTCGGCGCGACCGGCTCGGAAATCTCGCAAACGCAGGCGCGGCTGCTGTTGTCGCGG GTGCGCGTGCTGTCGTTCGGCGACGCGACGGCCGATCGCGACGGCACGCCGGGCCCGACGGGCGCGGGCGCGCGCACCGC GGTGCTCGCCGTGCCGACCGCGCAGGTCGACGCGCTGACGCTCGCCGAAGCGAGCGGGCGGCTCGTGCTCGCGCTGCGCA GCCCGCGCGACGACGACGTGGCCACGCGCACGGTCGCGATGCGCGCTTCGGGCGCCGGCGGGCCGTCGAATGAGGCGGCG ACGGGACTCGTGCTGGGCGAACTGTCGGGCAGCGGCGGCGCGCCCGCGCAAGTGCCGCGCGCGGCGCCCGCGAGGGTGGC GACGGCGTCGGCCGCGCCGCGTGCGGGCGGCAGCATCGAAGTGATCCGGGGTGGGCGGGCCGAGACGCTCGCCTATTGA
Upstream 100 bases:
>100_bases CCGGGCCGACTCGCCGCGCCGCCGTTTTTCTCCAACGTTTTTCCTTGCCGCTGCACTGATAACAATCATGGCCAATCATC TGATCAAGATCATCGCGGGG
Downstream 100 bases:
>100_bases TCGACATAGCGGTTTCGAACAGTGACGGCAGGGAGATGGCCGGCTCGCGCCGGTCTCCGACACGATGAAAAATAAACTGA TTGCATGGGCGGTGGCGTTT
Product: CpaB family Flp pilus assembly protein
Products: NA
Alternate protein names: Flp Pilus Assembly CpaB; Flp Pilus Assembly Protein; CpaB Family Flp Pilus Assembly Protein; Pilus Assembly Protein; Flp Pilus Assembly; Pilus Assembly Protein Cpab; Flp Type Pilus Assembly Protein; Signal Peptide Protein CpaB Like Protein; CpaB Pilus Assembly Protein; Signal Peptide Protein; Signal Peptide Protein CpaB Like; Transmembrane Fimbriae Assembly Protein; SAF Domain-Containing Protein
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MLIGIAILLGIYAWLLGRKPAPVAPGAAPAVATALVPVVVATRALPAGQPIPADALKVQQTPAPIAGAFPNPTLVTGRIP ANDIVAQAPVLESELMSGLADQIAPGERAVAIKVDDTNAVGNRLRPGNFVDVFVNLKRESGFGATGSEISQTQARLLLSR VRVLSFGDATADRDGTPGPTGAGARTAVLAVPTAQVDALTLAEASGRLVLALRSPRDDDVATRTVAMRASGAGGPSNEAA TGLVLGELSGSGGAPAQVPRAAPARVATASAAPRAGGSIEVIRGGRAETLAY
Sequences:
>Translated_292_residues MLIGIAILLGIYAWLLGRKPAPVAPGAAPAVATALVPVVVATRALPAGQPIPADALKVQQTPAPIAGAFPNPTLVTGRIP ANDIVAQAPVLESELMSGLADQIAPGERAVAIKVDDTNAVGNRLRPGNFVDVFVNLKRESGFGATGSEISQTQARLLLSR VRVLSFGDATADRDGTPGPTGAGARTAVLAVPTAQVDALTLAEASGRLVLALRSPRDDDVATRTVAMRASGAGGPSNEAA TGLVLGELSGSGGAPAQVPRAAPARVATASAAPRAGGSIEVIRGGRAETLAY >Mature_292_residues MLIGIAILLGIYAWLLGRKPAPVAPGAAPAVATALVPVVVATRALPAGQPIPADALKVQQTPAPIAGAFPNPTLVTGRIP ANDIVAQAPVLESELMSGLADQIAPGERAVAIKVDDTNAVGNRLRPGNFVDVFVNLKRESGFGATGSEISQTQARLLLSR VRVLSFGDATADRDGTPGPTGAGARTAVLAVPTAQVDALTLAEASGRLVLALRSPRDDDVATRTVAMRASGAGGPSNEAA TGLVLGELSGSGGAPAQVPRAAPARVATASAAPRAGGSIEVIRGGRAETLAY
Specific function: Unknown
COG id: COG3745
COG function: function code U; Flp pilus assembly protein CpaB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29225; Mature: 29225
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGIAILLGIYAWLLGRKPAPVAPGAAPAVATALVPVVVATRALPAGQPIPADALKVQQ CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEC TPAPIAGAFPNPTLVTGRIPANDIVAQAPVLESELMSGLADQIAPGERAVAIKVDDTNAV CCCCCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHH GNRLRPGNFVDVFVNLKRESGFGATGSEISQTQARLLLSRVRVLSFGDATADRDGTPGPT CCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GAGARTAVLAVPTAQVDALTLAEASGRLVLALRSPRDDDVATRTVAMRASGAGGPSNEAA CCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCHHHEEEEEEECCCCCCCCCCC TGLVLGELSGSGGAPAQVPRAAPARVATASAAPRAGGSIEVIRGGRAETLAY EEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MLIGIAILLGIYAWLLGRKPAPVAPGAAPAVATALVPVVVATRALPAGQPIPADALKVQQ CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEC TPAPIAGAFPNPTLVTGRIPANDIVAQAPVLESELMSGLADQIAPGERAVAIKVDDTNAV CCCCCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHH GNRLRPGNFVDVFVNLKRESGFGATGSEISQTQARLLLSRVRVLSFGDATADRDGTPGPT CCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GAGARTAVLAVPTAQVDALTLAEASGRLVLALRSPRDDDVATRTVAMRASGAGGPSNEAA CCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCHHHEEEEEEECCCCCCCCCCC TGLVLGELSGSGGAPAQVPRAAPARVATASAAPRAGGSIEVIRGGRAETLAY EEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA