| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83718984
Identifier: 83718984
GI number: 83718984
Start: 3697762
End: 3699030
Strand: Reverse
Name: 83718984
Synonym: BTH_I3244
Alternate gene names: NA
Gene position: 3699030-3697762 (Counterclockwise)
Preceding gene: 83720835
Following gene: 83718801
Centisome position: 97.11
GC content: 61.15
Gene sequence:
>1269_bases ATGACCGATGCAACAGTGAGCAAGAAGAGCAAGAATCCGAAGGCACCAAAGCTGTTTCCCGATGAGCTGATCGATCAGTT GCTTGCCCAGGTTCAGGGCAAGGATGCCGAGTCGATCCTGGGCGAATCGGGGCTGGCCGGCCAGCTCAAGAAGCAACTGG CCGAGCGCATGCTCGCGGCCGAGTTGAGCCACCATCCGGCAGCCGAGACCGAGCAAGGCAGGGCCGGTAACCACCGCAAC GGCACCAGCGCCAAGACGGTCCTGACGCCCAACGGCGAACTGAAGCTGGATATTCCGCGCGATCGACAGGCGACGTTTGA GCCGCAGTTGGTTGGCAAGTACCAACGCCGGCTGCCAGGCTTCGACGACCACGTGATCAGCATGTATGCGCGCGGCATGA GCGTTCGCGAGATTCAGGGCCATCTGCTGGAACTGTACGGGTTGCAGGTGTCGCCCGACCTGATTTCGACGGTCACCGAC GAGGTGCTGGCCGACGTCGAACAGTGGCAGCAGCGCCCGCTCGAGGCCATGTATCCGATTGTGTACTTCGACGCGCTGCG GCTGAAGATCCGCGACGAAGGCACGGTCAAGAACAAGGCGGTCTATCTGGCGCTGGGCATCCGCGCCGAGGGCCGCAAGG AAGTACTGGGTTTGTGGATCGAGCAAACCGAAGGCGCCAAGTTCTGGCTGAAGGTCTTCAACGAGCTGAAGAACCGCGGC TTGCACGACATCCTGATCGCGGTGGTCGATGGGTTGCGCGGCTTCCCCGAAGCGATCGAGGCGGTCTATCCGGCCGCCCA AATCCAGACCTGCATCGTGCATCTGATCCGCAATTCGCTGAATCTGGCGAGCTGGAAGGATCGCAAGCCGCTGGCTGCCG CGATCAAGCCGATCTACCAGGCCGCCACGGCCGAGGCGGCGGCAGCGGCGCTCGACGCCTTTGCGCAGAGCGAGTGGGGC CGCAAATTCCCTACCGTCGCGGCCATGTGGCAGCGCCAATGGGAACAGGTGATTCCCTTCTTTGCCTATCCGCCGGAGGT GCGTCGAATCGTATATACGACAAACGCTATCGAGAGCATGCACATGCAGTTGCGCAAGATCGTCAAGAACCGCGGCCACT TCCCGAGCGACGAAGCCGCCAGCAAACTGCTGTATCTGGCCTTGCGCAACATCGAAAAGGATTGGAAGATGCCGCCTATC ACTTGGCGGCAAGCAGTTAATCAGTTCGCCATTCTGTTCGGCGAGCGATTCACCTCCGCCATCAACTGA
Upstream 100 bases:
>100_bases GTGATCGGCTACCGGTTTCTGCTGCCCGTCCTGCCGGAATTCGAGCCTGTCAGATTTTTAGTGTGCTGAGGTCATGAGAC GATAACGGAATTAACGTCCT
Downstream 100 bases:
>100_bases GACCTTTAACCGGCCTCAGCACACGAAATTCCTGACACGTCCGCGCAGCCATCAGTGACATCTCTGTTGGTGATTTGGAC CAGCTTTACGTTGTCCTCCA
Product: transposase mutator family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MTDATVSKKSKNPKAPKLFPDELIDQLLAQVQGKDAESILGESGLAGQLKKQLAERMLAAELSHHPAAETEQGRAGNHRN GTSAKTVLTPNGELKLDIPRDRQATFEPQLVGKYQRRLPGFDDHVISMYARGMSVREIQGHLLELYGLQVSPDLISTVTD EVLADVEQWQQRPLEAMYPIVYFDALRLKIRDEGTVKNKAVYLALGIRAEGRKEVLGLWIEQTEGAKFWLKVFNELKNRG LHDILIAVVDGLRGFPEAIEAVYPAAQIQTCIVHLIRNSLNLASWKDRKPLAAAIKPIYQAATAEAAAAALDAFAQSEWG RKFPTVAAMWQRQWEQVIPFFAYPPEVRRIVYTTNAIESMHMQLRKIVKNRGHFPSDEAASKLLYLALRNIEKDWKMPPI TWRQAVNQFAILFGERFTSAIN
Sequences:
>Translated_422_residues MTDATVSKKSKNPKAPKLFPDELIDQLLAQVQGKDAESILGESGLAGQLKKQLAERMLAAELSHHPAAETEQGRAGNHRN GTSAKTVLTPNGELKLDIPRDRQATFEPQLVGKYQRRLPGFDDHVISMYARGMSVREIQGHLLELYGLQVSPDLISTVTD EVLADVEQWQQRPLEAMYPIVYFDALRLKIRDEGTVKNKAVYLALGIRAEGRKEVLGLWIEQTEGAKFWLKVFNELKNRG LHDILIAVVDGLRGFPEAIEAVYPAAQIQTCIVHLIRNSLNLASWKDRKPLAAAIKPIYQAATAEAAAAALDAFAQSEWG RKFPTVAAMWQRQWEQVIPFFAYPPEVRRIVYTTNAIESMHMQLRKIVKNRGHFPSDEAASKLLYLALRNIEKDWKMPPI TWRQAVNQFAILFGERFTSAIN >Mature_421_residues TDATVSKKSKNPKAPKLFPDELIDQLLAQVQGKDAESILGESGLAGQLKKQLAERMLAAELSHHPAAETEQGRAGNHRNG TSAKTVLTPNGELKLDIPRDRQATFEPQLVGKYQRRLPGFDDHVISMYARGMSVREIQGHLLELYGLQVSPDLISTVTDE VLADVEQWQQRPLEAMYPIVYFDALRLKIRDEGTVKNKAVYLALGIRAEGRKEVLGLWIEQTEGAKFWLKVFNELKNRGL HDILIAVVDGLRGFPEAIEAVYPAAQIQTCIVHLIRNSLNLASWKDRKPLAAAIKPIYQAATAEAAAAALDAFAQSEWGR KFPTVAAMWQRQWEQVIPFFAYPPEVRRIVYTTNAIESMHMQLRKIVKNRGHFPSDEAASKLLYLALRNIEKDWKMPPIT WRQAVNQFAILFGERFTSAIN
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 47513; Mature: 47382
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDATVSKKSKNPKAPKLFPDELIDQLLAQVQGKDAESILGESGLAGQLKKQLAERMLAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHH ELSHHPAAETEQGRAGNHRNGTSAKTVLTPNGELKLDIPRDRQATFEPQLVGKYQRRLPG HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC FDDHVISMYARGMSVREIQGHLLELYGLQVSPDLISTVTDEVLADVEQWQQRPLEAMYPI CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VYFDALRLKIRDEGTVKNKAVYLALGIRAEGRKEVLGLWIEQTEGAKFWLKVFNELKNRG HHHHHHHEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC LHDILIAVVDGLRGFPEAIEAVYPAAQIQTCIVHLIRNSLNLASWKDRKPLAAAIKPIYQ HHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AATAEAAAAALDAFAQSEWGRKFPTVAAMWQRQWEQVIPFFAYPPEVRRIVYTTNAIESM HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHEEEEHHHHHHHH HMQLRKIVKNRGHFPSDEAASKLLYLALRNIEKDWKMPPITWRQAVNQFAILFGERFTSA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IN CC >Mature Secondary Structure TDATVSKKSKNPKAPKLFPDELIDQLLAQVQGKDAESILGESGLAGQLKKQLAERMLAA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHH ELSHHPAAETEQGRAGNHRNGTSAKTVLTPNGELKLDIPRDRQATFEPQLVGKYQRRLPG HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC FDDHVISMYARGMSVREIQGHLLELYGLQVSPDLISTVTDEVLADVEQWQQRPLEAMYPI CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VYFDALRLKIRDEGTVKNKAVYLALGIRAEGRKEVLGLWIEQTEGAKFWLKVFNELKNRG HHHHHHHEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC LHDILIAVVDGLRGFPEAIEAVYPAAQIQTCIVHLIRNSLNLASWKDRKPLAAAIKPIYQ HHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AATAEAAAAALDAFAQSEWGRKFPTVAAMWQRQWEQVIPFFAYPPEVRRIVYTTNAIESM HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHEEEEHHHHHHHH HMQLRKIVKNRGHFPSDEAASKLLYLALRNIEKDWKMPPITWRQAVNQFAILFGERFTSA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]