| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is gspK [H]
Identifier: 83718959
GI number: 83718959
Start: 16144
End: 17397
Strand: Direct
Name: gspK [H]
Synonym: BTH_I0015
Alternate gene names: 83718959
Gene position: 16144-17397 (Clockwise)
Preceding gene: 83721506
Following gene: 83719668
Centisome position: 0.42
GC content: 71.13
Gene sequence:
>1254_bases ATGCGCGCTTCCGCCCTCCTCGTTCGCCTCGCTTCGCTTCGCCGCCGGCGCGTGCCGCACGATCAGCATGCGCCGGGCGC GGCGCGTTCGGCGTCGGCGCGTTTGCCGTGCGCGCCGCGCAGCAGCGGCAGCGCCGCCGCCGATTTCCGCGCGGGCCCGC TCGCGCGCCGGCCGCGAGCGCCCGCGCATCGCGAGCGGGGCGTCGCGATCATCAGCGCGCTGCTCGTCGTCGCGCTGTCG GCGATCCTCGTCGCCGGGATGCTCTGGCGCCAGCAGGTGCAGGTGCGCCGGATCGAGAACCAGCGGCTGCTCGCGCAGGC GCAGTGGATTGCGCGCGGCGCGCTCGACTGGACGCGGATGGTGCTGCGCTCCGAAGGCGATACGGCGCCGGGCATCACCT ATCTCGGCGGGATCTGGGCGGTGCCGATCGCGAAGACGAAGCTGTCCGACTTTCTCGGCCGCATCGGTGCGGCCGACGCG GCCGAAGGCGCGGATACCTATCTGTCCGGCTCGATCGAGGACGCGCAGGCGAAGTTCAATCTGCGCGATCTCGTGTCGTC GCCCGCGCCGGGCGCGCTGCAATTGAACGCCGCGCAGGTGCAGACGTTTCAGCGGCTGCTCGCGACGCTCGGGCTCGACC AGCAACTCGCGAAGATCGTCGCGCGACGCGTGCGCGCGGGGCTCAGGCAGTCGGCGACGCGTTTCCAGGCGGCCCAGCTG CCGGGCGTCGCGAGCGGCGTGCCCGTTCCGCTGCCGGACGGCGGCACCGAGAGCGGCGGCAATTTCACCGACGAGCCGGG CATCGCGGGCGGCGAAGGCCGTGGGCCCGCGCCGCTGATGATGACGAGCGTCGATTCGCTGCTCGACGTCGAGGGTTTCA CGCCGGAGATGGTCGAGCGGCTGCGCCCGTTCGTCACCGTGCTGCCGACGGTGACGCCCGTCAATCTGAACACCGCGCCC GCCGAGGTGATCGCGGCGCTCGTGCCGGGGATGTCCGTTTCGTCCGCGCAGGCGCTCGTGTCGCGGCGCGAGACCGTGTT TTTTCGCAACGTCGGCGACGTGACGCTCGCGCTGCGCGGCGCCGGCGCGCCGAACGTGAACCTCGATTCGAGCCAGATCG ACGTCACTTCCAGCTATTTCATCGTGCATGGCCGGATCGAGCACGACCGGGCAGTCGTGGATCGCACGTCGCTCGTGTAT CGTGATCCGACCACGCACACGACGCGCATCGTGCGCATTCGCGATCAGCTATAA
Upstream 100 bases:
>100_bases AACGCGCCGCCGCCGCGCGCGGTGACCGGGCTCGAGGTCAGCATCGGCGCGACGTCGCTGCGCGTGCCGATCACGCGCAT ATTTCTCGTCGGGGAGTGAT
Downstream 100 bases:
>100_bases CAACGCCATTCGGGAGAGGAGCTCTTGAGCACGTTGATTGTCCTATTGCCGCCGCGCGAGCCGGCCGTGCCGTTGCAGGA ATGGCAATGGCCCGAGCTGC
Product: general secretion pathway protein K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MRASALLVRLASLRRRRVPHDQHAPGAARSASARLPCAPRSSGSAAADFRAGPLARRPRAPAHRERGVAIISALLVVALS AILVAGMLWRQQVQVRRIENQRLLAQAQWIARGALDWTRMVLRSEGDTAPGITYLGGIWAVPIAKTKLSDFLGRIGAADA AEGADTYLSGSIEDAQAKFNLRDLVSSPAPGALQLNAAQVQTFQRLLATLGLDQQLAKIVARRVRAGLRQSATRFQAAQL PGVASGVPVPLPDGGTESGGNFTDEPGIAGGEGRGPAPLMMTSVDSLLDVEGFTPEMVERLRPFVTVLPTVTPVNLNTAP AEVIAALVPGMSVSSAQALVSRRETVFFRNVGDVTLALRGAGAPNVNLDSSQIDVTSSYFIVHGRIEHDRAVVDRTSLVY RDPTTHTTRIVRIRDQL
Sequences:
>Translated_417_residues MRASALLVRLASLRRRRVPHDQHAPGAARSASARLPCAPRSSGSAAADFRAGPLARRPRAPAHRERGVAIISALLVVALS AILVAGMLWRQQVQVRRIENQRLLAQAQWIARGALDWTRMVLRSEGDTAPGITYLGGIWAVPIAKTKLSDFLGRIGAADA AEGADTYLSGSIEDAQAKFNLRDLVSSPAPGALQLNAAQVQTFQRLLATLGLDQQLAKIVARRVRAGLRQSATRFQAAQL PGVASGVPVPLPDGGTESGGNFTDEPGIAGGEGRGPAPLMMTSVDSLLDVEGFTPEMVERLRPFVTVLPTVTPVNLNTAP AEVIAALVPGMSVSSAQALVSRRETVFFRNVGDVTLALRGAGAPNVNLDSSQIDVTSSYFIVHGRIEHDRAVVDRTSLVY RDPTTHTTRIVRIRDQL >Mature_417_residues MRASALLVRLASLRRRRVPHDQHAPGAARSASARLPCAPRSSGSAAADFRAGPLARRPRAPAHRERGVAIISALLVVALS AILVAGMLWRQQVQVRRIENQRLLAQAQWIARGALDWTRMVLRSEGDTAPGITYLGGIWAVPIAKTKLSDFLGRIGAADA AEGADTYLSGSIEDAQAKFNLRDLVSSPAPGALQLNAAQVQTFQRLLATLGLDQQLAKIVARRVRAGLRQSATRFQAAQL PGVASGVPVPLPDGGTESGGNFTDEPGIAGGEGRGPAPLMMTSVDSLLDVEGFTPEMVERLRPFVTVLPTVTPVNLNTAP AEVIAALVPGMSVSSAQALVSRRETVFFRNVGDVTLALRGAGAPNVNLDSSQIDVTSSYFIVHGRIEHDRAVVDRTSLVY RDPTTHTTRIVRIRDQL
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP K family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005628 [H]
Pfam domain/function: PF03934 GspK [H]
EC number: NA
Molecular weight: Translated: 44472; Mature: 44472
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASALLVRLASLRRRRVPHDQHAPGAARSASARLPCAPRSSGSAAADFRAGPLARRPRA CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAHRERGVAIISALLVVALSAILVAGMLWRQQVQVRRIENQRLLAQAQWIARGALDWTRM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRSEGDTAPGITYLGGIWAVPIAKTKLSDFLGRIGAADAAEGADTYLSGSIEDAQAKFN HHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHCC LRDLVSSPAPGALQLNAAQVQTFQRLLATLGLDQQLAKIVARRVRAGLRQSATRFQAAQL HHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC PGVASGVPVPLPDGGTESGGNFTDEPGIAGGEGRGPAPLMMTSVDSLLDVEGFTPEMVER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH LRPFVTVLPTVTPVNLNTAPAEVIAALVPGMSVSSAQALVSRRETVFFRNVGDVTLALRG HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCEEEEEEC AGAPNVNLDSSQIDVTSSYFIVHGRIEHDRAVVDRTSLVYRDPTTHTTRIVRIRDQL CCCCCCCCCCCCEEEECEEEEEEEEECCCHHHHHHHHEEEECCCCCCEEEEEEECCC >Mature Secondary Structure MRASALLVRLASLRRRRVPHDQHAPGAARSASARLPCAPRSSGSAAADFRAGPLARRPRA CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAHRERGVAIISALLVVALSAILVAGMLWRQQVQVRRIENQRLLAQAQWIARGALDWTRM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLRSEGDTAPGITYLGGIWAVPIAKTKLSDFLGRIGAADAAEGADTYLSGSIEDAQAKFN HHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHCC LRDLVSSPAPGALQLNAAQVQTFQRLLATLGLDQQLAKIVARRVRAGLRQSATRFQAAQL HHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC PGVASGVPVPLPDGGTESGGNFTDEPGIAGGEGRGPAPLMMTSVDSLLDVEGFTPEMVER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH LRPFVTVLPTVTPVNLNTAPAEVIAALVPGMSVSSAQALVSRRETVFFRNVGDVTLALRG HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCEEEEEEC AGAPNVNLDSSQIDVTSSYFIVHGRIEHDRAVVDRTSLVYRDPTTHTTRIVRIRDQL CCCCCCCCCCCCEEEECEEEEEEEEECCCHHHHHHHHEEEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1588814; 10984043 [H]