| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721506
Identifier: 83721506
GI number: 83721506
Start: 15414
End: 16142
Strand: Direct
Name: 83721506
Synonym: BTH_I0014
Alternate gene names: NA
Gene position: 15414-16142 (Clockwise)
Preceding gene: 83720909
Following gene: 83718959
Centisome position: 0.4
GC content: 70.92
Gene sequence:
>729_bases ATGAAACCAGCCGTCCGCTCTGAGCGCCGCGCGCCCGGCAGAAAGCGCACCCGGCAGGCGCGCCGCGTCTTCCGGCGAAA CGCGCGCCGCGGCGAGCGCGGCTTCACGCTGATCGAGATGATGATCGCGATCACGATTCTCGCGGTGATCGCGATCCTGT CGTGGCGGGGGCTCGACCAGATCATCCGCGGCCGCGAGAAGGTGGCGGCCGCGATGGAGGACGAGCGCGTGTTCGAGCAG ATGTTCGACCAGATGCGCATCGACGCGCGGCGCGCCGCGACCGACGACGAAGCGGGCCAGCCCGCGGTGCGCGTCGCGGG CGACACGTTGCAGATCGTGCGCGAGTTCGACGCGCCGGGCGCGGCGCCGCGGCTGCAGGTCGTGCGCTACCGGATCTCGA ACGGGCGCGTCGTGCGTTACGCGTCGCCGCCGATCGCCGACGTCAACGCGTTGCGCGACGCGCTGCATGGCGGCGACACC GAAGGCTGGAGCCAGGTGCCGCTGATGCGCGGCGTCGGCATGATCAACGCGCGGCTGTACGTGCCGAAGGTCGGCTGGAC GACCAGCATGCCGGACGCCGACAACGCGCTCGAGCAGAACAACAATGCGCTCAAGGTGCCGATGCTCGGCAACGCGCCGC CGCCGCGCGCGGTGACCGGGCTCGAGGTCAGCATCGGCGCGACGTCGCTGCGCGTGCCGATCACGCGCATATTTCTCGTC GGGGAGTGA
Upstream 100 bases:
>100_bases GTGAGGTCGACGCCGAATCCGGTGTTCAGGCGCGTCGAGATCGCGGTGTCGATGAACGGCCGCGCCGGCGTGCTCGCGCA GATGGTTACGGTGGTCGCGA
Downstream 100 bases:
>100_bases TATGCGCGCTTCCGCCCTCCTCGTTCGCCTCGCTTCGCTTCGCCGCCGGCGCGTGCCGCACGATCAGCATGCGCCGGGCG CGGCGCGTTCGGCGTCGGCG
Product: general secretory pathway protein J
Products: NA
Alternate protein names: Type II Secretory Pathway Component PulJ; General Secretion Pathway Protein J; Type II Secretion System Protein J
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKPAVRSERRAPGRKRTRQARRVFRRNARRGERGFTLIEMMIAITILAVIAILSWRGLDQIIRGREKVAAAMEDERVFEQ MFDQMRIDARRAATDDEAGQPAVRVAGDTLQIVREFDAPGAAPRLQVVRYRISNGRVVRYASPPIADVNALRDALHGGDT EGWSQVPLMRGVGMINARLYVPKVGWTTSMPDADNALEQNNNALKVPMLGNAPPPRAVTGLEVSIGATSLRVPITRIFLV GE
Sequences:
>Translated_242_residues MKPAVRSERRAPGRKRTRQARRVFRRNARRGERGFTLIEMMIAITILAVIAILSWRGLDQIIRGREKVAAAMEDERVFEQ MFDQMRIDARRAATDDEAGQPAVRVAGDTLQIVREFDAPGAAPRLQVVRYRISNGRVVRYASPPIADVNALRDALHGGDT EGWSQVPLMRGVGMINARLYVPKVGWTTSMPDADNALEQNNNALKVPMLGNAPPPRAVTGLEVSIGATSLRVPITRIFLV GE >Mature_242_residues MKPAVRSERRAPGRKRTRQARRVFRRNARRGERGFTLIEMMIAITILAVIAILSWRGLDQIIRGREKVAAAMEDERVFEQ MFDQMRIDARRAATDDEAGQPAVRVAGDTLQIVREFDAPGAAPRLQVVRYRISNGRVVRYASPPIADVNALRDALHGGDT EGWSQVPLMRGVGMINARLYVPKVGWTTSMPDADNALEQNNNALKVPMLGNAPPPRAVTGLEVSIGATSLRVPITRIFLV GE
Specific function: Unknown
COG id: COG4795
COG function: function code U; Type II secretory pathway, component PulJ
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26832; Mature: 26832
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPAVRSERRAPGRKRTRQARRVFRRNARRGERGFTLIEMMIAITILAVIAILSWRGLDQ CCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH IIRGREKVAAAMEDERVFEQMFDQMRIDARRAATDDEAGQPAVRVAGDTLQIVREFDAPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCCC AAPRLQVVRYRISNGRVVRYASPPIADVNALRDALHGGDTEGWSQVPLMRGVGMINARLY CCCHHEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEEEE VPKVGWTTSMPDADNALEQNNNALKVPMLGNAPPPRAVTGLEVSIGATSLRVPITRIFLV ECCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEECCEEEEEEE GE CC >Mature Secondary Structure MKPAVRSERRAPGRKRTRQARRVFRRNARRGERGFTLIEMMIAITILAVIAILSWRGLDQ CCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH IIRGREKVAAAMEDERVFEQMFDQMRIDARRAATDDEAGQPAVRVAGDTLQIVREFDAPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCCC AAPRLQVVRYRISNGRVVRYASPPIADVNALRDALHGGDTEGWSQVPLMRGVGMINARLY CCCHHEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEEEE VPKVGWTTSMPDADNALEQNNNALKVPMLGNAPPPRAVTGLEVSIGATSLRVPITRIFLV ECCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEECCEEEEEEE GE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA