| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is nasE [H]
Identifier: 83718936
GI number: 83718936
Start: 517375
End: 517770
Strand: Reverse
Name: nasE [H]
Synonym: BTH_I0463
Alternate gene names: 83718936
Gene position: 517770-517375 (Counterclockwise)
Preceding gene: 83719776
Following gene: 83721497
Centisome position: 13.59
GC content: 72.73
Gene sequence:
>396_bases ATGTCCGCCACGCAACCCGAATGGATCGCCGTCTGCCGACTGGACGACATCCCGCCGCTCGGCGCGCGCGTTCTCACGCG CGCGGCCGGCACGCCGATCGCCCTCTTTCGCACCGCGAGCGACGCGGTGTTCGCGCTCCTCGATCGCTGCCCGCACAAGG GCGGCCCGCTGTCGCAGGGCATCGTTCACGGCGAGCAGGTCACGTGTCCGCTGCACGGCTTGAATGTCGCGTTCTCGAGC GGCTGCGCGCTGCCGCCCGACGAAGGCTGCACGAGCGTCTTCAGCGTGAGGCGCGAAGGCGACACGGTGCTGCTCGAGCG CACCGAGCTCGCGACGCTCGGCGTCGACGACGCGCCGCAGCCGGCCCCGCTCGCATCGCCGGGCGCCGCCGCATGA
Upstream 100 bases:
>100_bases CGCCGTCGCGCCCGCCGATGCGTGATGCCGATGCGCGATGCGTGACGCGTCGCGCATCGCGCCGCCCGCGCGCCCCGTCA ATCACCCAGGAATCCGAATC
Downstream 100 bases:
>100_bases CGCTCGACACGCTCGCGCAGCCCATCGCGCAACCCACGCCCGGCGCCGTGCGCGAAACGCGCTCGACGTGCTGCTATTGC GGCGTCGGCTGCGGCGTCGT
Product: nitrite reductase [NAD(P)H] small subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSATQPEWIAVCRLDDIPPLGARVLTRAAGTPIALFRTASDAVFALLDRCPHKGGPLSQGIVHGEQVTCPLHGLNVAFSS GCALPPDEGCTSVFSVRREGDTVLLERTELATLGVDDAPQPAPLASPGAAA
Sequences:
>Translated_131_residues MSATQPEWIAVCRLDDIPPLGARVLTRAAGTPIALFRTASDAVFALLDRCPHKGGPLSQGIVHGEQVTCPLHGLNVAFSS GCALPPDEGCTSVFSVRREGDTVLLERTELATLGVDDAPQPAPLASPGAAA >Mature_130_residues SATQPEWIAVCRLDDIPPLGARVLTRAAGTPIALFRTASDAVFALLDRCPHKGGPLSQGIVHGEQVTCPLHGLNVAFSSG CALPPDEGCTSVFSVRREGDTVLLERTELATLGVDDAPQPAPLASPGAAA
Specific function: Required for nitrite assimilation. Required for activity of the reductase [H]
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012748 - InterPro: IPR017941 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.7.1.4 [H]
Molecular weight: Translated: 13526; Mature: 13394
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATQPEWIAVCRLDDIPPLGARVLTRAAGTPIALFRTASDAVFALLDRCPHKGGPLSQG CCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCC IVHGEQVTCPLHGLNVAFSSGCALPPDEGCTSVFSVRREGDTVLLERTELATLGVDDAPQ EECCCEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEECCCCCCC PAPLASPGAAA CCCCCCCCCCC >Mature Secondary Structure SATQPEWIAVCRLDDIPPLGARVLTRAAGTPIALFRTASDAVFALLDRCPHKGGPLSQG CCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCC IVHGEQVTCPLHGLNVAFSSGCALPPDEGCTSVFSVRREGDTVLLERTELATLGVDDAPQ EECCCEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEECCCCCCC PAPLASPGAAA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7868621; 8969502; 9384377 [H]