| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is coaBC [H]
Identifier: 83718888
GI number: 83718888
Start: 883568
End: 884779
Strand: Reverse
Name: coaBC [H]
Synonym: BTH_I0768
Alternate gene names: 83718888
Gene position: 884779-883568 (Counterclockwise)
Preceding gene: 83721661
Following gene: 83718436
Centisome position: 23.23
GC content: 69.55
Gene sequence:
>1212_bases TTGGCACACGCAGAACTCGCAGGAAAACACCTCGTCCTCGGCCTCACGGGCGGCATCGCCTGCTACAAGATCGCCGAGCT CACGCGCCTCTTGACGAAGGCGGGCGCGACCGTGCAGATCGTGATGACCGACGCCGCGACGCAGTTCATCACCCCCGTCA CGATGCAGGCGCTGTCCGGCCGCCCCGTCTACACGAGCCAGTGGGACGCGCGGATGCCGAACAACATGGCGCACATCGAT CTGTCGCGCGAAGCCGACGCGATCGTGATCGCGCCCGCGTCGACCGATTTCCTCGCGAAGCTCTCGCACGGCTTCGCCGA CGATCTGCTGTCGACGCTGTGCATCGCGCGCGACTGCCCGCTCCTCGTCGTGCCGGCGATGAACCGCCAGATGTGGCAGA ACCCGGCGACGCAGCGCAACGTCGCGCAACTGCGCCGCGACGGCGTCGCGGTGCTCGGCCCCGATTCGGGCGCGCAGGCG TGCGGCGAGATCGGCGACGGCCGGATGCTCGAGCCGGAAGCGATCTACGAAGCGATCGTCACGCATTTCCAGCCGAAGGT GTTCGCGCATCGCCGCGTGCTGATCACGGCCGGCCCCACCTTCGAGCCGCTCGATCCGGTTCGCGGCCTGACGAACCGCT CGAGCGGCAAGATGGGCTTCGCGCTCGCGCGCGCCGCGCAGCAGGCGGGCGCCGACGTGCATCTCGTCGCCGGCCCCGTT CACCTGCCGACGCCGTGGGGCGTGTACCGCGAGGACGTGCGGACCGCGCAGCAGATGTACGACGCGGTGATGAACGCGGT GCCGGACGCGGACGTGTTCATCGCGGTCGCCGCGGTCGCCGACTGGCGCGCCGCGCAGCCCGCCGAGCACAAGATCAAGA AGACGGCCGACCACAAGATGCCGGCGCTCACGTTCGTCGAGAACCCGGACATTCTCGCGAGCGTCGCCGCGCTGCCCGAT GCGCCCTACTGCGTCGGCTTCGCGGCGGAAAGCGGCGATCTCGACGTGCACGGCGAGGAAAAGCGCGTGCGCAAGAAGGT GCCGCTGCTGATCGGCAACCTCGGGCCGCTCACGTTCGGGCTCGACGACAACGAAGTCGTGCTGTTCGAAGCGTGCGGCG CGACGCGGCTGCCGCGCGCCGACAAGATGACGCTCGCGCACGCGCTCGTCGCCGAGATCGCAAAGCGCCTGCCCGACGCG AGCCTCATCTGA
Upstream 100 bases:
>100_bases ATCTACGACGAGTTGCGTCGCGTGCGCGGCGCGCGCTAGGCGCATACACTTCGCGCAGGGGCCGGCGCGCGCCGGCCCCA CGTGCTTTCGGAGGCCTCAG
Downstream 100 bases:
>100_bases CGCGTCGCCGCGCCGCTCATCGTTCAACTCTCAACTCTCGCCACCGATTCTCGCCGCATGAAACTCGACCTGAAGATTCT CGACGCGCGCATGCGCGACT
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAHAELAGKHLVLGLTGGIACYKIAELTRLLTKAGATVQIVMTDAATQFITPVTMQALSGRPVYTSQWDARMPNNMAHID LSREADAIVIAPASTDFLAKLSHGFADDLLSTLCIARDCPLLVVPAMNRQMWQNPATQRNVAQLRRDGVAVLGPDSGAQA CGEIGDGRMLEPEAIYEAIVTHFQPKVFAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV HLPTPWGVYREDVRTAQQMYDAVMNAVPDADVFIAVAAVADWRAAQPAEHKIKKTADHKMPALTFVENPDILASVAALPD APYCVGFAAESGDLDVHGEEKRVRKKVPLLIGNLGPLTFGLDDNEVVLFEACGATRLPRADKMTLAHALVAEIAKRLPDA SLI
Sequences:
>Translated_403_residues MAHAELAGKHLVLGLTGGIACYKIAELTRLLTKAGATVQIVMTDAATQFITPVTMQALSGRPVYTSQWDARMPNNMAHID LSREADAIVIAPASTDFLAKLSHGFADDLLSTLCIARDCPLLVVPAMNRQMWQNPATQRNVAQLRRDGVAVLGPDSGAQA CGEIGDGRMLEPEAIYEAIVTHFQPKVFAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV HLPTPWGVYREDVRTAQQMYDAVMNAVPDADVFIAVAAVADWRAAQPAEHKIKKTADHKMPALTFVENPDILASVAALPD APYCVGFAAESGDLDVHGEEKRVRKKVPLLIGNLGPLTFGLDDNEVVLFEACGATRLPRADKMTLAHALVAEIAKRLPDA SLI >Mature_402_residues AHAELAGKHLVLGLTGGIACYKIAELTRLLTKAGATVQIVMTDAATQFITPVTMQALSGRPVYTSQWDARMPNNMAHIDL SREADAIVIAPASTDFLAKLSHGFADDLLSTLCIARDCPLLVVPAMNRQMWQNPATQRNVAQLRRDGVAVLGPDSGAQAC GEIGDGRMLEPEAIYEAIVTHFQPKVFAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPVH LPTPWGVYREDVRTAQQMYDAVMNAVPDADVFIAVAAVADWRAAQPAEHKIKKTADHKMPALTFVENPDILASVAALPDA PYCVGFAAESGDLDVHGEEKRVRKKVPLLIGNLGPLTFGLDDNEVVLFEACGATRLPRADKMTLAHALVAEIAKRLPDAS LI
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=177, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=4e-17, Organism=Escherichia coli, GI87082301, Length=398, Percent_Identity=48.7437185929648, Blast_Score=332, Evalue=2e-92, Organism=Caenorhabditis elegans, GI17560194, Length=177, Percent_Identity=31.638418079096, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322762, Length=189, Percent_Identity=30.6878306878307, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24657262, Length=190, Percent_Identity=31.0526315789474, Blast_Score=92, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43206; Mature: 43075
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAELAGKHLVLGLTGGIACYKIAELTRLLTKAGATVQIVMTDAATQFITPVTMQALSG CCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCC RPVYTSQWDARMPNNMAHIDLSREADAIVIAPASTDFLAKLSHGFADDLLSTLCIARDCP CCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHCCCC LLVVPAMNRQMWQNPATQRNVAQLRRDGVAVLGPDSGAQACGEIGDGRMLEPEAIYEAIV EEEEECCCHHHHCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHCCCCCEECHHHHHHHHH THFQPKVFAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV HHCCCCHHHCCEEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCE HLPTPWGVYREDVRTAQQMYDAVMNAVPDADVFIAVAAVADWRAAQPAEHKIKKTADHKM ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHCCCCCCHHHHHHHHHCCCC PALTFVENPDILASVAALPDAPYCVGFAAESGDLDVHGEEKRVRKKVPLLIGNLGPLTFG CEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCEEEECCCCEEEC LDDNEVVLFEACGATRLPRADKMTLAHALVAEIAKRLPDASLI CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AHAELAGKHLVLGLTGGIACYKIAELTRLLTKAGATVQIVMTDAATQFITPVTMQALSG CCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCC RPVYTSQWDARMPNNMAHIDLSREADAIVIAPASTDFLAKLSHGFADDLLSTLCIARDCP CCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHCCCC LLVVPAMNRQMWQNPATQRNVAQLRRDGVAVLGPDSGAQACGEIGDGRMLEPEAIYEAIV EEEEECCCHHHHCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHCCCCCEECHHHHHHHHH THFQPKVFAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV HHCCCCHHHCCEEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCE HLPTPWGVYREDVRTAQQMYDAVMNAVPDADVFIAVAAVADWRAAQPAEHKIKKTADHKM ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHCCCCCCHHHHHHHHHCCCC PALTFVENPDILASVAALPDAPYCVGFAAESGDLDVHGEEKRVRKKVPLLIGNLGPLTFG CEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCEEEECCCCEEEC LDDNEVVLFEACGATRLPRADKMTLAHALVAEIAKRLPDASLI CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]