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The map label for this gene is scpB [H]

Identifier: 83718805

GI number: 83718805

Start: 2933679

End: 2935055

Strand: Reverse

Name: scpB [H]

Synonym: BTH_I2568

Alternate gene names: 83718805

Gene position: 2935055-2933679 (Counterclockwise)

Preceding gene: 83719035

Following gene: 83720156

Centisome position: 77.05

GC content: 70.37

Gene sequence:

>1377_bases
ATGAATACCCAAGAGGCGAAGATCGTCCTCGAGACTGCTTTGATCTGCGCGCAGGAACCGCTGAAACTCGGCGATTTGCG
CAAGCTCTTTGCCGACGGCGTGTCGGCGGACACAGTCCGAACACTGCTCGAAGATCTGAAACAGGAATGGACCGGACGTG
GGGTCGAACTCGTCGCTCTCGCGTCGGGCTGGCGCTTCCAGAGCAAGCCGGCGATGCGCACGTATCTGGACCGGCTGCAT
CCGGAGAAGCCGCCGAAATATTCGCGGGCCGTGCTGGAGACGCTCGCGATCATCGCGTACCGGCAGCCGGTCACGCGCGG
CGACATCGAGGAAATTCGCGGCGTCACGGTGAACACGCAGGTCGTCAAGCAGCTCGAGGATCGCGGCTGGATCGAGGTGA
TCGGTCATCGTGATGTGCCGGGCCGTCCGGCGCTCTACGCGACGACGAAGCAGTTTCTCGACGACCTCGGCCTGAAGGCG
CTCGACGATCTGCCCGCGCTCGAGGAGCCGGCCGCGCATCTGGAGGCGAGCCTCCTCGCGCAGCAGGCGATCGACTTTCC
CGATGATGCACGCGACGACGGCGAGGCGCTTGCCGGCGCATCCGACGAGGGCGTGACCGGCTCGGAAGCGGCAGGCGCGG
AGGCGGGCGAGGCTATCGAACAGGCAATCGAGCCGTCGGTTTCGCCGGACGAGGGCTTGGCACGGGCCGGTGATGAGCCG
GCGCGAGCGGACGTCGCGGCGGCGAGCGCCGGAGAGGCGCGACCCGAAGGGGCGGACGGCTCGGCGGCACGAATCGTCGA
TCCCGCCGATAATGACAAGCGAGCCGGCGCCGAGGCGGCGCAGGCCTTCGACGAAGCCGATGCACCGCACGACCACGACG
CGGGGCAGGCGGCCGGCCGAGCCGCTCGCGAGACCGAATCGGGCGGCATGCGCGAGCCGGCGTTCGCGGGCGGCGAAGAG
GTCGACGCGGCCGCGTCGCACGAGCACGCGGCCGAGCAGCTTGCAGCGGACGCAACCGCGGAGACGCATGCCGAGGCGGC
GGGCAATGCCGCCGGCGACGGCGAGCGCATCGAATCGTCCGCGCGGGCGAACGAAAACGCAAACCCCGCCGCGCGGCCGG
ACGCAGAACCGGCCGGCGCGGCACACGCAGCAACCCGCGAGGCGGCCGCCGACCCGGCGGCGGGCCGAGCGACGAAGGAA
GACCACGGCGCGATCGGCGGCATCCCGCACGATGCCGAGCCGGTCCGGGCGCACGCGGAGGAGATGTTGGACGATACGTC
CGGCAGTCTCGCCGACGCCGTGCGCAGTGCAAGCGAGGCGGTCCCCGAGCGCGAGCAGCAGGACGACGAAGAAGCGCCTG
CGAAGCGTCGCGCCTGA

Upstream 100 bases:

>100_bases
CCATCAATATGACCGATCAGAATCGGGCGAGCGCGTCTTCCGTTCCTTTCGTCTGTTCGATTGATCCGGTTCGCTTGACC
ACAGGGTCTGACCTAGCTGC

Downstream 100 bases:

>100_bases
GACGGCGGCCGAACCCCAGCCGTGCCCGCGACGGGCGCGAGACCTGACATTTTGAGGTTGTTTTGACTGATACCCACGAC
ATCGATTCGTCCGAATCCGC

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQEWTGRGVELVALASGWRFQSKPAMRTYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAAHLEASLLAQQAIDFPDDARDDGEALAGASDEGVTGSEAAGAEAGEAIEQAIEPSVSPDEGLARAGDEP
ARADVAAASAGEARPEGADGSAARIVDPADNDKRAGAEAAQAFDEADAPHDHDAGQAAGRAARETESGGMREPAFAGGEE
VDAAASHEHAAEQLAADATAETHAEAAGNAAGDGERIESSARANENANPAARPDAEPAGAAHAATREAAADPAAGRATKE
DHGAIGGIPHDAEPVRAHAEEMLDDTSGSLADAVRSASEAVPEREQQDDEEAPAKRRA

Sequences:

>Translated_458_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQEWTGRGVELVALASGWRFQSKPAMRTYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAAHLEASLLAQQAIDFPDDARDDGEALAGASDEGVTGSEAAGAEAGEAIEQAIEPSVSPDEGLARAGDEP
ARADVAAASAGEARPEGADGSAARIVDPADNDKRAGAEAAQAFDEADAPHDHDAGQAAGRAARETESGGMREPAFAGGEE
VDAAASHEHAAEQLAADATAETHAEAAGNAAGDGERIESSARANENANPAARPDAEPAGAAHAATREAAADPAAGRATKE
DHGAIGGIPHDAEPVRAHAEEMLDDTSGSLADAVRSASEAVPEREQQDDEEAPAKRRA
>Mature_458_residues
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQEWTGRGVELVALASGWRFQSKPAMRTYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKA
LDDLPALEEPAAHLEASLLAQQAIDFPDDARDDGEALAGASDEGVTGSEAAGAEAGEAIEQAIEPSVSPDEGLARAGDEP
ARADVAAASAGEARPEGADGSAARIVDPADNDKRAGAEAAQAFDEADAPHDHDAGQAAGRAARETESGGMREPAFAGGEE
VDAAASHEHAAEQLAADATAETHAEAAGNAAGDGERIESSARANENANPAARPDAEPAGAAHAATREAAADPAAGRATKE
DHGAIGGIPHDAEPVRAHAEEMLDDTSGSLADAVRSASEAVPEREQQDDEEAPAKRRA

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 47795; Mature: 47795

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQEWTGRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ASGWRFQSKPAMRTYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
ECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKALDDLPALEEPAAHLEASLLA
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHH
QQAIDFPDDARDDGEALAGASDEGVTGSEAAGAEAGEAIEQAIEPSVSPDEGLARAGDEP
HHHCCCCCCCCCCHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCHHHHHCCCCC
ARADVAAASAGEARPEGADGSAARIVDPADNDKRAGAEAAQAFDEADAPHDHDAGQAAGR
HHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AARETESGGMREPAFAGGEEVDAAASHEHAAEQLAADATAETHAEAAGNAAGDGERIESS
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ARANENANPAARPDAEPAGAAHAATREAAADPAAGRATKEDHGAIGGIPHDAEPVRAHAE
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHH
EMLDDTSGSLADAVRSASEAVPEREQQDDEEAPAKRRA
HHHHCCCCHHHHHHHHHHHHCCCHHHCCHHHCCHHCCC
>Mature Secondary Structure
MNTQEAKIVLETALICAQEPLKLGDLRKLFADGVSADTVRTLLEDLKQEWTGRGVELVAL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ASGWRFQSKPAMRTYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
ECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRGWIEVIGHRDVPGRPALYATTKQFLDDLGLKALDDLPALEEPAAHLEASLLA
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHH
QQAIDFPDDARDDGEALAGASDEGVTGSEAAGAEAGEAIEQAIEPSVSPDEGLARAGDEP
HHHCCCCCCCCCCHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCHHHHHCCCCC
ARADVAAASAGEARPEGADGSAARIVDPADNDKRAGAEAAQAFDEADAPHDHDAGQAAGR
HHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AARETESGGMREPAFAGGEEVDAAASHEHAAEQLAADATAETHAEAAGNAAGDGERIESS
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ARANENANPAARPDAEPAGAAHAATREAAADPAAGRATKEDHGAIGGIPHDAEPVRAHAE
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHH
EMLDDTSGSLADAVRSASEAVPEREQQDDEEAPAKRRA
HHHHCCCCHHHHHHHHHHHHCCCHHHCCHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]