| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718594
Identifier: 83718594
GI number: 83718594
Start: 19376
End: 20167
Strand: Direct
Name: 83718594
Synonym: BTH_I0018
Alternate gene names: NA
Gene position: 19376-20167 (Clockwise)
Preceding gene: 83721070
Following gene: 83718884
Centisome position: 0.51
GC content: 73.23
Gene sequence:
>792_bases ATGCCGATGACCTGGCCGATGCGCATCCGGCGCGGCGCGCCGTGGGTCGTCGTCGGCGGCCTCGCGATCCTCGTCACGCT CGTCGCGCTGCTGCCCGCGGCGTGGGTGACGCCGCAGTTCGCGCGCGCGACGGGCGGCCGCGTCAATCTCGTCGATCCGG AAGGCTCGCTCTGGCGCGGCTCGGCGACGCTGCTGCTCGCGCCCGGCGCGGACCGCAGCGCGTCGACGCTCCTGCCCGGC CGCGTCGAATGGCGCACGCGGTTCTGGCCGCTTTTCGCCGGGCGCGTGCGGATGCGGTTGCGCCAGACCGATGCGATGCC CGACGGCGTCGCGCTCGATGCGACGCTGCGCGGCGCGGTGTTGTCGGCGGGCTCGATGGCGGTGCCGGCGTCGCTGCTCG TGGGCCTCGGCACGCCGTTCAACACGCTCGACCTGCAGGGTAACGTGCGGCTCGACTGGACCGACTGGCGGCTCTTCGGC GCGGATGCGTTCGGCCAGCTCACGGTGACGATCACCGACATGAGCTCGCGCGTGTCGCGCGTGAAGCCGCTCGGATCGTA CCGGGCGGTGCTCGAGGCGCGCGGCGCGAATTCGACGCTCGACCTGTCGACGTCGAAAGGGCCGCTGATGCTGTCGGGGC AAGGGAGCTTCGGCGCGACGGGCACGTCGTTTCGCGGCACCGCGAGCGCCGCGCCCGAGCAGCGCGACAACCTGGCGGGC CTGCTGAACCTGCTCGGCCATCCGATCGGCGGCGGCGCGGTGTCGTTGATTTATGGCGACGCGGCGCGCTGA
Upstream 100 bases:
>100_bases CGCTCAAGGAAGACGGCCAGGTCGACCTGACGGCCGTGCTGCAGCCGGCGTCGGTCAAGTGAGCGATGTCGATGCGCGAT ACGGCCGATGGAGCGCGCGA
Downstream 100 bases:
>100_bases CGTCGAAGGCGCGGCGAGCCTCGCGTCGATCGGCCGAGGCCGGCTCGCGCGGCCGGCGCGGCCCACGGCTTGGCCGACTT GGGGCCGGCCGCCGGATGCA
Product: general secretory pathway protein N
Products: NA
Alternate protein names: General Secretory Pathway Protein N; Type II Secretion System Protein N; General Secretion Pathway Protein N
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPMTWPMRIRRGAPWVVVGGLAILVTLVALLPAAWVTPQFARATGGRVNLVDPEGSLWRGSATLLLAPGADRSASTLLPG RVEWRTRFWPLFAGRVRMRLRQTDAMPDGVALDATLRGAVLSAGSMAVPASLLVGLGTPFNTLDLQGNVRLDWTDWRLFG ADAFGQLTVTITDMSSRVSRVKPLGSYRAVLEARGANSTLDLSTSKGPLMLSGQGSFGATGTSFRGTASAAPEQRDNLAG LLNLLGHPIGGGAVSLIYGDAAR
Sequences:
>Translated_263_residues MPMTWPMRIRRGAPWVVVGGLAILVTLVALLPAAWVTPQFARATGGRVNLVDPEGSLWRGSATLLLAPGADRSASTLLPG RVEWRTRFWPLFAGRVRMRLRQTDAMPDGVALDATLRGAVLSAGSMAVPASLLVGLGTPFNTLDLQGNVRLDWTDWRLFG ADAFGQLTVTITDMSSRVSRVKPLGSYRAVLEARGANSTLDLSTSKGPLMLSGQGSFGATGTSFRGTASAAPEQRDNLAG LLNLLGHPIGGGAVSLIYGDAAR >Mature_262_residues PMTWPMRIRRGAPWVVVGGLAILVTLVALLPAAWVTPQFARATGGRVNLVDPEGSLWRGSATLLLAPGADRSASTLLPGR VEWRTRFWPLFAGRVRMRLRQTDAMPDGVALDATLRGAVLSAGSMAVPASLLVGLGTPFNTLDLQGNVRLDWTDWRLFGA DAFGQLTVTITDMSSRVSRVKPLGSYRAVLEARGANSTLDLSTSKGPLMLSGQGSFGATGTSFRGTASAAPEQRDNLAGL LNLLGHPIGGGAVSLIYGDAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27735; Mature: 27604
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMTWPMRIRRGAPWVVVGGLAILVTLVALLPAAWVTPQFARATGGRVNLVDPEGSLWRG CCCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCEEEC SATLLLAPGADRSASTLLPGRVEWRTRFWPLFAGRVRMRLRQTDAMPDGVALDATLRGAV CEEEEEECCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCEEECHHHHHHH LSAGSMAVPASLLVGLGTPFNTLDLQGNVRLDWTDWRLFGADAFGQLTVTITDMSSRVSR CCCCCCCCCHHHHHHCCCCCCEEEECCCEEEEEECEEEECCCCCCEEEEEEECCHHHHHH VKPLGSYRAVLEARGANSTLDLSTSKGPLMLSGQGSFGATGTSFRGTASAAPEQRDNLAG HCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH LLNLLGHPIGGGAVSLIYGDAAR HHHHHCCCCCCCEEEEEECCCCC >Mature Secondary Structure PMTWPMRIRRGAPWVVVGGLAILVTLVALLPAAWVTPQFARATGGRVNLVDPEGSLWRG CCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCEEEC SATLLLAPGADRSASTLLPGRVEWRTRFWPLFAGRVRMRLRQTDAMPDGVALDATLRGAV CEEEEEECCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCEEECHHHHHHH LSAGSMAVPASLLVGLGTPFNTLDLQGNVRLDWTDWRLFGADAFGQLTVTITDMSSRVSR CCCCCCCCCHHHHHHCCCCCCEEEECCCEEEEEECEEEECCCCCCEEEEEEECCHHHHHH VKPLGSYRAVLEARGANSTLDLSTSKGPLMLSGQGSFGATGTSFRGTASAAPEQRDNLAG HCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH LLNLLGHPIGGGAVSLIYGDAAR HHHHHCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA