| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718566
Identifier: 83718566
GI number: 83718566
Start: 1125109
End: 1126509
Strand: Direct
Name: 83718566
Synonym: BTH_I0988
Alternate gene names: NA
Gene position: 1125109-1126509 (Clockwise)
Preceding gene: 83719250
Following gene: 83719240
Centisome position: 29.54
GC content: 66.1
Gene sequence:
>1401_bases GTGGTGCGGCGATCATGCGGACTGCATGGGGCGTCTTTCAGTGGATGCGGTGCATCGTGCGCTGCAAAACGTTTTGGCGC TTGCGCCGTCAAGTTCACGTTGATGACGATAATGACATCGCGCGTCGAGCGCGTGCTTTGGATCGCTTGTCCCACGCTGA TGTTCGGCGTGATGTTCGGACACATGAACGGAGTCGTCAACACGACGCTTGCGTTGATCGGCGTCGGCACGCTTGCCGGC ATCCTGTCCGCGAGCCGGCCGCCGTTCCGGCATTGGCCGCTCGTTTTGCCGATCGTCGTGTGGGCCGCGTGGAGTCTCGC GGCGGTCGGCTGGTCGCTGTATCCACGCATCAGTTTGCGCGCGTGGTTCGATGAGGTGCTGTATCCGCTCGTCACGTTCT GGGGTTTCTGGTTGTTCGGCTCGCGCGTGAAGCGTCCCGAATGGCCGGCGCTCGTCGTGTGGGTCGCATGTGTGTTGCTC GCGCTCCTCAGCGCGCTCTACTGGGGGCACCTGCAGCCGCCGACGCCGAACACCTTTCCGATTCGCTTCTACAACCGCGT CGGCCACACGAGCACGCTCGCCGTGTTCGCGATGCCGCTCTTCGTCGCGCTGCTGATGCGGGCTCGCTGGCGCGTGATCG GCGTGATCGGGCTCCTCGCTTGCGGTTTCGTCGGGCTCGCGAGCCTGAATCGCTTTTTCTGGCCGGCGGCGGGGGCGACG CTCGTGGTCGCGTTCTATCCGCTCTATCGTCGCCGACTGGGCGTGAGCGTTGTCGCGATCGCGGTTCTTGGCGCCGCCGC GCTCGGGCTGCTCGAATTCAGTGCGCGTGAGCGCGATCCATCCGCGTCCGCCGCAACCGCTTCGGCATCGTCGGCGGCGC GCGATATCACGGTCGCTGGCCAGCGGGTCTACGTGCCGGGCGAACTCAACGCGCTCGGCGACACGCTGTCGTCCGACACG CGCCCGAAGCTCTGGGCGTTCTATGCCGAGCAGGGCAAGCAGCACGCGTGGCTCGGCGTCGGCTTCGGCAAGCCGCTGCC CGGACATGCGTACGCGGTCGACGCGCCGCCGCTCCTGCTGCGGATCGAGCCGCAGGCGCTCACGCATGCGCACAACCTGT TCCTCAACACGTGGCTGCAGACAGGCTATATCGGTGTTGCGCTGGAGACCATGCTGTTCTTGAGTCTCGCGGCCGCGTTC TGGCGGCTCAGGCGCGATGCGCCGGCCGTGTCCGCGGCGGGGCTCGCACTCGTCGTCGGGATGATCGCGAAGAACACGGT CGACGATTTCATGTGGCAGACGACGATGCTCGCGTTCTGGTCGTTTGCGGGTTTCCTGCTCGGTCAAGGTGAACGCGAGG CGCGCGTACCGCGCGTGTCGCAAGACGGAGACGCACGATGA
Upstream 100 bases:
>100_bases TGACGATTGCGGACATGCCGTGCCGCGATCAGCCATCGATTTTCCGACGTCATGTCGCGTGGGTACGGCGCTGCGACCGG AATGCGGCAACGTGCGTCGC
Downstream 100 bases:
>100_bases CGACACCCGTCATGCCCCGCACGCGGGACGCTGCGTCGGACGTCGCCCTCCCGGGCGACCGCCGCGTGCGCATCCTGTTT CACATCAACGATTTCGGCCG
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MVRRSCGLHGASFSGCGASCAAKRFGACAVKFTLMTIMTSRVERVLWIACPTLMFGVMFGHMNGVVNTTLALIGVGTLAG ILSASRPPFRHWPLVLPIVVWAAWSLAAVGWSLYPRISLRAWFDEVLYPLVTFWGFWLFGSRVKRPEWPALVVWVACVLL ALLSALYWGHLQPPTPNTFPIRFYNRVGHTSTLAVFAMPLFVALLMRARWRVIGVIGLLACGFVGLASLNRFFWPAAGAT LVVAFYPLYRRRLGVSVVAIAVLGAAALGLLEFSARERDPSASAATASASSAARDITVAGQRVYVPGELNALGDTLSSDT RPKLWAFYAEQGKQHAWLGVGFGKPLPGHAYAVDAPPLLLRIEPQALTHAHNLFLNTWLQTGYIGVALETMLFLSLAAAF WRLRRDAPAVSAAGLALVVGMIAKNTVDDFMWQTTMLAFWSFAGFLLGQGEREARVPRVSQDGDAR
Sequences:
>Translated_466_residues MVRRSCGLHGASFSGCGASCAAKRFGACAVKFTLMTIMTSRVERVLWIACPTLMFGVMFGHMNGVVNTTLALIGVGTLAG ILSASRPPFRHWPLVLPIVVWAAWSLAAVGWSLYPRISLRAWFDEVLYPLVTFWGFWLFGSRVKRPEWPALVVWVACVLL ALLSALYWGHLQPPTPNTFPIRFYNRVGHTSTLAVFAMPLFVALLMRARWRVIGVIGLLACGFVGLASLNRFFWPAAGAT LVVAFYPLYRRRLGVSVVAIAVLGAAALGLLEFSARERDPSASAATASASSAARDITVAGQRVYVPGELNALGDTLSSDT RPKLWAFYAEQGKQHAWLGVGFGKPLPGHAYAVDAPPLLLRIEPQALTHAHNLFLNTWLQTGYIGVALETMLFLSLAAAF WRLRRDAPAVSAAGLALVVGMIAKNTVDDFMWQTTMLAFWSFAGFLLGQGEREARVPRVSQDGDAR >Mature_466_residues MVRRSCGLHGASFSGCGASCAAKRFGACAVKFTLMTIMTSRVERVLWIACPTLMFGVMFGHMNGVVNTTLALIGVGTLAG ILSASRPPFRHWPLVLPIVVWAAWSLAAVGWSLYPRISLRAWFDEVLYPLVTFWGFWLFGSRVKRPEWPALVVWVACVLL ALLSALYWGHLQPPTPNTFPIRFYNRVGHTSTLAVFAMPLFVALLMRARWRVIGVIGLLACGFVGLASLNRFFWPAAGAT LVVAFYPLYRRRLGVSVVAIAVLGAAALGLLEFSARERDPSASAATASASSAARDITVAGQRVYVPGELNALGDTLSSDT RPKLWAFYAEQGKQHAWLGVGFGKPLPGHAYAVDAPPLLLRIEPQALTHAHNLFLNTWLQTGYIGVALETMLFLSLAAAF WRLRRDAPAVSAAGLALVVGMIAKNTVDDFMWQTTMLAFWSFAGFLLGQGEREARVPRVSQDGDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50783; Mature: 50783
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRSCGLHGASFSGCGASCAAKRFGACAVKFTLMTIMTSRVERVLWIACPTLMFGVMFG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMNGVVNTTLALIGVGTLAGILSASRPPFRHWPLVLPIVVWAAWSLAAVGWSLYPRISLR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH AWFDEVLYPLVTFWGFWLFGSRVKRPEWPALVVWVACVLLALLSALYWGHLQPPTPNTFP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC IRFYNRVGHTSTLAVFAMPLFVALLMRARWRVIGVIGLLACGFVGLASLNRFFWPAAGAT EEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LVVAFYPLYRRRLGVSVVAIAVLGAAALGLLEFSARERDPSASAATASASSAARDITVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHCEEEECC QRVYVPGELNALGDTLSSDTRPKLWAFYAEQGKQHAWLGVGFGKPLPGHAYAVDAPPLLL CEEECCCCCHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCEEE RIEPQALTHAHNLFLNTWLQTGYIGVALETMLFLSLAAAFWRLRRDAPAVSAAGLALVVG EECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH MIAKNTVDDFMWQTTMLAFWSFAGFLLGQGEREARVPRVSQDGDAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVRRSCGLHGASFSGCGASCAAKRFGACAVKFTLMTIMTSRVERVLWIACPTLMFGVMFG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMNGVVNTTLALIGVGTLAGILSASRPPFRHWPLVLPIVVWAAWSLAAVGWSLYPRISLR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH AWFDEVLYPLVTFWGFWLFGSRVKRPEWPALVVWVACVLLALLSALYWGHLQPPTPNTFP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC IRFYNRVGHTSTLAVFAMPLFVALLMRARWRVIGVIGLLACGFVGLASLNRFFWPAAGAT EEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LVVAFYPLYRRRLGVSVVAIAVLGAAALGLLEFSARERDPSASAATASASSAARDITVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHCEEEECC QRVYVPGELNALGDTLSSDTRPKLWAFYAEQGKQHAWLGVGFGKPLPGHAYAVDAPPLLL CEEECCCCCHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCEEE RIEPQALTHAHNLFLNTWLQTGYIGVALETMLFLSLAAAFWRLRRDAPAVSAAGLALVVG EECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH MIAKNTVDDFMWQTTMLAFWSFAGFLLGQGEREARVPRVSQDGDAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA