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The map label for this gene is rfaQ [C]

Identifier: 83719250

GI number: 83719250

Start: 1124135

End: 1125211

Strand: Direct

Name: rfaQ [C]

Synonym: BTH_I0987

Alternate gene names: 83719250

Gene position: 1124135-1125211 (Clockwise)

Preceding gene: 83718559

Following gene: 83718566

Centisome position: 29.51

GC content: 69.36

Gene sequence:

>1077_bases
TTGCGGCGCAGGCCCGCGCATCCGCGGCGCATCCTGATCGCGCATCATCTGTTGCTCGGCGACACGTTGCTGTTGACGCC
GCTCGTCGCGAAGCTGCGCGAGCAGTACCCGGATGCGCAGATCGTGCTGGCGTGCCCGAAGGCGATTGCACCGCTCTACG
CGAGCAAGCCGTTCGGCGTCGAGGCGTTCGCGTTCGATCCGCGCGACGGCGCGTCGGTCAAGCGTCTTCTTGTGTCGGGG
CCGTACGATCTCGGCATCGTCGCGGGCGACAATCGCCACAGTTGGCTTGCGCTCGGCGCGGGTTGTCGCTGGATCGTCGC
GCATGCGGGCGACGCGCCCGCATGGAAGAACTGGCCGGTCGACGAACCCGTTCCGTATCCGGACGCGCCCGCCGCCTGGG
CAGACTTCGCCGCGGCGCTCGTCGAAGGGCCGGCGCCGCGCCTCTACCGCTCGTCCGACTGGCCGGCGCCGCAGGCCCGC
GCGCCGCTGCCCGCCGCGTTGCGCGATCGCCCCTACGTGGTGCTCCATCCGGGGGCGAGCACGGCAGTCAAGCGCTGGCC
TTCGGCACGCTGGCTCGAGCTCGCGAGCCGCATCGAGGCGCAAGGCTATCTGCCCGTCTGGAGCGGCGGGCCGAGCGAAA
TCGAACTCGTGGCCGAGATCGCCCCCAATCCCGCACAGCCGAATCTTGCAGGCCGGCTCGGCCTCGCCGATCTATGGCAC
GTGCTCGCGGGCGCTCAGGCGGTCGTGTGCCCCGATACCGGCATTGCGCATCTCGCGCGTCTCGTCGGTGTGCCGACCGT
CGCGCTGTTCGGCCCCGGCAACGCCGGTATCCACGGCGCGGGCCGCTATTGGCAGGACGCGCCGTTCGTCGCGTTGACGA
TTGCGGACATGCCGTGCCGCGATCAGCCATCGATTTTCCGACGTCATGTCGCGTGGGTACGGCGCTGCGACCGGAATGCG
GCAACGTGCGTCGCGTGGTGCGGCGATCATGCGGACTGCATGGGGCGTCTTTCAGTGGATGCGGTGCATCGTGCGCTGCA
AAACGTTTTGGCGCTTGCGCCGTCAAGTTCACGTTGA

Upstream 100 bases:

>100_bases
AGTGACGGAATCGATCAGCCGGTGATCTAATCGAATGAGCAGACTCCACGGCCGGATCCACATCTTCTCGCGAGCGCTGC
CGAGGCTCGCCCTCAAGCCG

Downstream 100 bases:

>100_bases
TGACGATAATGACATCGCGCGTCGAGCGCGTGCTTTGGATCGCTTGTCCCACGCTGATGTTCGGCGTGATGTTCGGACAC
ATGAACGGAGTCGTCAACAC

Product: heptosyltransferase family protein

Products: NA

Alternate protein names: Glycosyltransferase; Lipopolysaccharide Heptosyltransferase I; Transferase; Lipopolysaccharide Core Biosynthesis Heptosyltransferase; Family 9 Glycosyl Transferase; ADP-HeptoseLPS Heptosyltransferase-Like Protein; Heptosyltransferase Family Protein; Heptosyltransferase I; Heptosyltransferase; ADP-Heptose-Lipooligosaccharide Heptosyltransferase II; Hydrolase; ADP-HeptoseLPS Heptosyltransferase

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRRRPAHPRRILIAHHLLLGDTLLLTPLVAKLREQYPDAQIVLACPKAIAPLYASKPFGVEAFAFDPRDGASVKRLLVSG
PYDLGIVAGDNRHSWLALGAGCRWIVAHAGDAPAWKNWPVDEPVPYPDAPAAWADFAAALVEGPAPRLYRSSDWPAPQAR
APLPAALRDRPYVVLHPGASTAVKRWPSARWLELASRIEAQGYLPVWSGGPSEIELVAEIAPNPAQPNLAGRLGLADLWH
VLAGAQAVVCPDTGIAHLARLVGVPTVALFGPGNAGIHGAGRYWQDAPFVALTIADMPCRDQPSIFRRHVAWVRRCDRNA
ATCVAWCGDHADCMGRLSVDAVHRALQNVLALAPSSSR

Sequences:

>Translated_358_residues
MRRRPAHPRRILIAHHLLLGDTLLLTPLVAKLREQYPDAQIVLACPKAIAPLYASKPFGVEAFAFDPRDGASVKRLLVSG
PYDLGIVAGDNRHSWLALGAGCRWIVAHAGDAPAWKNWPVDEPVPYPDAPAAWADFAAALVEGPAPRLYRSSDWPAPQAR
APLPAALRDRPYVVLHPGASTAVKRWPSARWLELASRIEAQGYLPVWSGGPSEIELVAEIAPNPAQPNLAGRLGLADLWH
VLAGAQAVVCPDTGIAHLARLVGVPTVALFGPGNAGIHGAGRYWQDAPFVALTIADMPCRDQPSIFRRHVAWVRRCDRNA
ATCVAWCGDHADCMGRLSVDAVHRALQNVLALAPSSSR
>Mature_358_residues
MRRRPAHPRRILIAHHLLLGDTLLLTPLVAKLREQYPDAQIVLACPKAIAPLYASKPFGVEAFAFDPRDGASVKRLLVSG
PYDLGIVAGDNRHSWLALGAGCRWIVAHAGDAPAWKNWPVDEPVPYPDAPAAWADFAAALVEGPAPRLYRSSDWPAPQAR
APLPAALRDRPYVVLHPGASTAVKRWPSARWLELASRIEAQGYLPVWSGGPSEIELVAEIAPNPAQPNLAGRLGLADLWH
VLAGAQAVVCPDTGIAHLARLVGVPTVALFGPGNAGIHGAGRYWQDAPFVALTIADMPCRDQPSIFRRHVAWVRRCDRNA
ATCVAWCGDHADCMGRLSVDAVHRALQNVLALAPSSSR

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38588; Mature: 38588

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRPAHPRRILIAHHLLLGDTLLLTPLVAKLREQYPDAQIVLACPKAIAPLYASKPFGV
CCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCC
EAFAFDPRDGASVKRLLVSGPYDLGIVAGDNRHSWLALGAGCRWIVAHAGDAPAWKNWPV
EEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCC
DEPVPYPDAPAAWADFAAALVEGPAPRLYRSSDWPAPQARAPLPAALRDRPYVVLHPGAS
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCC
TAVKRWPSARWLELASRIEAQGYLPVWSGGPSEIELVAEIAPNPAQPNLAGRLGLADLWH
HHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCCCHHHCCHHHHHH
VLAGAQAVVCPDTGIAHLARLVGVPTVALFGPGNAGIHGAGRYWQDAPFVALTIADMPCR
HHHCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DQPSIFRRHVAWVRRCDRNAATCVAWCGDHADCMGRLSVDAVHRALQNVLALAPSSSR
CCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRRRPAHPRRILIAHHLLLGDTLLLTPLVAKLREQYPDAQIVLACPKAIAPLYASKPFGV
CCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCC
EAFAFDPRDGASVKRLLVSGPYDLGIVAGDNRHSWLALGAGCRWIVAHAGDAPAWKNWPV
EEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCC
DEPVPYPDAPAAWADFAAALVEGPAPRLYRSSDWPAPQARAPLPAALRDRPYVVLHPGAS
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCC
TAVKRWPSARWLELASRIEAQGYLPVWSGGPSEIELVAEIAPNPAQPNLAGRLGLADLWH
HHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCCCHHHCCHHHHHH
VLAGAQAVVCPDTGIAHLARLVGVPTVALFGPGNAGIHGAGRYWQDAPFVALTIADMPCR
HHHCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DQPSIFRRHVAWVRRCDRNAATCVAWCGDHADCMGRLSVDAVHRALQNVLALAPSSSR
CCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA