| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83718548
Identifier: 83718548
GI number: 83718548
Start: 581786
End: 584056
Strand: Direct
Name: 83718548
Synonym: BTH_I0517
Alternate gene names: NA
Gene position: 581786-584056 (Clockwise)
Preceding gene: 83719198
Following gene: 83718603
Centisome position: 15.27
GC content: 72.48
Gene sequence:
>2271_bases ATGCTCGACGACTTCTCGCGCGTGCTGCGTTTCAAGCCGCATCTGCTGGTGCGCGACACCGGCTCCGGCGCGTTGTATGT GGTGGACGAATTCAGACGCTCGGTGTTGCCGGGCGACGTGTTTCCCGCGCTCGCCGCGTGCATGCGCGATCGCCTGACGA TCGCGCAGACGTTCGCGGCGCTCGCCGCGCGGTTTTCTCAATGGGAGGTGCTCGCCGCGCTCGATCACCTGGTGCGGCGC GGTTACGTGCGCGCCGACGCGCCCGGCGAGCGCGACGCGGCGATCGGCTTCTATGAGCGCACGGGCGTCGACGGCGATGC GGCGAGCGACATCGCGTCGCGCCTCGCGGTCGCCGTCGACGCGTTCGGCGTGGACCCGCGCGCGCAGCTCGACGCATTCG CCGCGTGCGGCATCGGCGTCGCGCCCGACGCGCCGCTGACGGTCGCGCTCGCGGACGGCTACGAGCGCGCCGAATTGATC GACGCCGCCGAACGCGCGGCGGCGCGCGGCGACGCACTGCTCGTCGTCGTTCCCGATCGCGTGGAGCCGCTGCTGGGCCC GCTGCTCGGCCCGCCGGCCGGCGCGCGGTCGGCATCGGCCTCGACGGAGGAGGCGGGCGCCGACGCGCCGCCCTGCATCG AATGCGTGCGCTACTGGACCGCGCTGAACCGCCCGGTCGAGACGCTGCTCGCGCGCCTGCACGGCAGCGACGCGGCCCGC TTGCCGGGCGCGCATAGCCGTGCGAGCGAAGCCGCCGTCGCGGCCGTCGTCGCGTCGTTCGTCGAGCAGATCGCGGTGAA CGCGCAGCGCCGCCGCCATGCGAGCGCGCACATCGTGTCGCTGCGTGTCGACACGCTCGCCACCGCCGCGCATCGCGTCG TCAGGCGGCCGCAATGTCCGCGCTGCGGCAACGCGCGATGGATGCGCGAGCAGGCCGAGCGCCCGGTGACGCTCGCATCG GCGGATGCGGGCGCGCGCCGCGAGGGCGGCTATCGGACACTCGCCGCCGCCGAGCTCGTCAAACGCTACGGACATCTGAT TTCCCCGGTGAGCGGCCCGATCGCCTATCTGCATCCGATGCCCGGGCGCAACGCCGGCCTGCGGCACGTCTACGTCGCCG GCTACCTGGTGTGTCCGCCGAGCGCGCCGCGCGAGAACCGTTTCGACAAGCTGTGCTCGGGCAAGGGCGCGAGCGACGCG CAGGCGCGCGCGAGCGCGCTCGCCGAGGCGCTCGAACGCTTCAGCGGCGTTCATCAGGGCGACGAGGCGACGCTGCGCGG CAGCCTCGCGGAGCTGTCCGCGCACGCGCCGCCGGGTGGCGGCCCGATCGACGTCAACGCGCTGCAGCAATACAGCGATC GCCAGTTCGAGCGGCGCGAGCGCCACAACGCGACGACCGACGATCCGCGCAAGCAGGTGCCGCAGCGCTTCACGCGCGAC AGCGTGATCGACTGGACGCCCGCATGGTCGATCGCGACGGGCGCGCGGCGGCTCGTGCCGCTTGCCTACTGCTATGCGGA AACGCCGGCCGCGAGCGGCGCCGCCTATTGCGTGCACAACCCGAACGGCTGCGCGGCGGGCGCGTGCATCGAGGAGGCGA TCCTGCAGGGCCTGCTCGAACTCGTCGAGCGCGATGCCGTCGCGATCTGGTGGTACAACATGCTGCGCCGGCCGGCCGTC GACATCGAGAGCTTCGGCGATCCGTACTTCGATGCGCTCGTCGCCGACTATGCGTCGCTCGGCTGGCGCCTGTGGGCGCT CGACATCACGCACGACCTGCGCATGCCGGTATTCGTCGCGCTCGCGCGCGAAACGGCGACAGGGCGTTTCTCGATCGGCT TCGGCTGTCATCTCGACAGCCGGATCGCGTTGCAGCGCGCGCTCACCGAAGTGAACCAACTGCTCGACGTCGGCGCGTCG GCGCCGCCGCCGTGGGACGCCGACAAGCTGCCGGACGACGCGTTCCTCCATCCCGATCCCGCGCTGCCGCCGACGCGCGG GCCGTCGCGGGCGTCGCACGGCGCGTGCGATCTGAAGGGCGACATCGAGAATGGCGTCGCGCGCTTGTCCGCGGCGGGCA TCGATACGCTCGTCGTCGACAAGACGCGGCCCGACATCGGCCTGCCGGTCGTGCAGGTGATCGCGCCGGGCCTGTGTCAC TTCTGGCCGCGCTTCGGCGCGCCGCGGCTGTATTCGGTGCCGGTTGCCGAGCGCTGGTGCGAGCGGCCGCGCGACGAGGA CGAGCTCAATCGCGCGCTGCTGTTCCTGTAG
Upstream 100 bases:
>100_bases ACCTGCTGCTGAGCCGTTCACACGGCGACCTGCGGCGCGGCCCGGCGCATTTCGCGCGCGGACCGCGCTTTTCGATCGCG GTATCCCGTACGGGTGGGCG
Downstream 100 bases:
>100_bases CGCAGGCCAGTTGCCGGGCTTGCGAGCGCCGCGCGTTCGATGCGTGCGGCGCGCGCATCGATATCATTCGACGAGGAGCG CACGTGACGATTCAAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 756; Mature: 756
Protein sequence:
>756_residues MLDDFSRVLRFKPHLLVRDTGSGALYVVDEFRRSVLPGDVFPALAACMRDRLTIAQTFAALAARFSQWEVLAALDHLVRR GYVRADAPGERDAAIGFYERTGVDGDAASDIASRLAVAVDAFGVDPRAQLDAFAACGIGVAPDAPLTVALADGYERAELI DAAERAAARGDALLVVVPDRVEPLLGPLLGPPAGARSASASTEEAGADAPPCIECVRYWTALNRPVETLLARLHGSDAAR LPGAHSRASEAAVAAVVASFVEQIAVNAQRRRHASAHIVSLRVDTLATAAHRVVRRPQCPRCGNARWMREQAERPVTLAS ADAGARREGGYRTLAAAELVKRYGHLISPVSGPIAYLHPMPGRNAGLRHVYVAGYLVCPPSAPRENRFDKLCSGKGASDA QARASALAEALERFSGVHQGDEATLRGSLAELSAHAPPGGGPIDVNALQQYSDRQFERRERHNATTDDPRKQVPQRFTRD SVIDWTPAWSIATGARRLVPLAYCYAETPAASGAAYCVHNPNGCAAGACIEEAILQGLLELVERDAVAIWWYNMLRRPAV DIESFGDPYFDALVADYASLGWRLWALDITHDLRMPVFVALARETATGRFSIGFGCHLDSRIALQRALTEVNQLLDVGAS APPPWDADKLPDDAFLHPDPALPPTRGPSRASHGACDLKGDIENGVARLSAAGIDTLVVDKTRPDIGLPVVQVIAPGLCH FWPRFGAPRLYSVPVAERWCERPRDEDELNRALLFL
Sequences:
>Translated_756_residues MLDDFSRVLRFKPHLLVRDTGSGALYVVDEFRRSVLPGDVFPALAACMRDRLTIAQTFAALAARFSQWEVLAALDHLVRR GYVRADAPGERDAAIGFYERTGVDGDAASDIASRLAVAVDAFGVDPRAQLDAFAACGIGVAPDAPLTVALADGYERAELI DAAERAAARGDALLVVVPDRVEPLLGPLLGPPAGARSASASTEEAGADAPPCIECVRYWTALNRPVETLLARLHGSDAAR LPGAHSRASEAAVAAVVASFVEQIAVNAQRRRHASAHIVSLRVDTLATAAHRVVRRPQCPRCGNARWMREQAERPVTLAS ADAGARREGGYRTLAAAELVKRYGHLISPVSGPIAYLHPMPGRNAGLRHVYVAGYLVCPPSAPRENRFDKLCSGKGASDA QARASALAEALERFSGVHQGDEATLRGSLAELSAHAPPGGGPIDVNALQQYSDRQFERRERHNATTDDPRKQVPQRFTRD SVIDWTPAWSIATGARRLVPLAYCYAETPAASGAAYCVHNPNGCAAGACIEEAILQGLLELVERDAVAIWWYNMLRRPAV DIESFGDPYFDALVADYASLGWRLWALDITHDLRMPVFVALARETATGRFSIGFGCHLDSRIALQRALTEVNQLLDVGAS APPPWDADKLPDDAFLHPDPALPPTRGPSRASHGACDLKGDIENGVARLSAAGIDTLVVDKTRPDIGLPVVQVIAPGLCH FWPRFGAPRLYSVPVAERWCERPRDEDELNRALLFL >Mature_756_residues MLDDFSRVLRFKPHLLVRDTGSGALYVVDEFRRSVLPGDVFPALAACMRDRLTIAQTFAALAARFSQWEVLAALDHLVRR GYVRADAPGERDAAIGFYERTGVDGDAASDIASRLAVAVDAFGVDPRAQLDAFAACGIGVAPDAPLTVALADGYERAELI DAAERAAARGDALLVVVPDRVEPLLGPLLGPPAGARSASASTEEAGADAPPCIECVRYWTALNRPVETLLARLHGSDAAR LPGAHSRASEAAVAAVVASFVEQIAVNAQRRRHASAHIVSLRVDTLATAAHRVVRRPQCPRCGNARWMREQAERPVTLAS ADAGARREGGYRTLAAAELVKRYGHLISPVSGPIAYLHPMPGRNAGLRHVYVAGYLVCPPSAPRENRFDKLCSGKGASDA QARASALAEALERFSGVHQGDEATLRGSLAELSAHAPPGGGPIDVNALQQYSDRQFERRERHNATTDDPRKQVPQRFTRD SVIDWTPAWSIATGARRLVPLAYCYAETPAASGAAYCVHNPNGCAAGACIEEAILQGLLELVERDAVAIWWYNMLRRPAV DIESFGDPYFDALVADYASLGWRLWALDITHDLRMPVFVALARETATGRFSIGFGCHLDSRIALQRALTEVNQLLDVGAS APPPWDADKLPDDAFLHPDPALPPTRGPSRASHGACDLKGDIENGVARLSAAGIDTLVVDKTRPDIGLPVVQVIAPGLCH FWPRFGAPRLYSVPVAERWCERPRDEDELNRALLFL
Specific function: Unknown
COG id: COG1944
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0142 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017667 - InterPro: IPR003776 [H]
Pfam domain/function: PF02624 YcaO [H]
EC number: NA
Molecular weight: Translated: 81497; Mature: 81497
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDFSRVLRFKPHLLVRDTGSGALYVVDEFRRSVLPGDVFPALAACMRDRLTIAQTFAA CCCHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LAARFSQWEVLAALDHLVRRGYVRADAPGERDAAIGFYERTGVDGDAASDIASRLAVAVD HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHH AFGVDPRAQLDAFAACGIGVAPDAPLTVALADGYERAELIDAAERAAARGDALLVVVPDR HCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCH VEPLLGPLLGPPAGARSASASTEEAGADAPPCIECVRYWTALNRPVETLLARLHGSDAAR HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC LPGAHSRASEAAVAAVVASFVEQIAVNAQRRRHASAHIVSLRVDTLATAAHRVVRRPQCP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEHHHHHHHHHHHHHCCCCCC RCGNARWMREQAERPVTLASADAGARREGGYRTLAAAELVKRYGHLISPVSGPIAYLHPM CCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCC PGRNAGLRHVYVAGYLVCPPSAPRENRFDKLCSGKGASDAQARASALAEALERFSGVHQG CCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC DEATLRGSLAELSAHAPPGGGPIDVNALQQYSDRQFERRERHNATTDDPRKQVPQRFTRD CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC SVIDWTPAWSIATGARRLVPLAYCYAETPAASGAAYCVHNPNGCAAGACIEEAILQGLLE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH LVERDAVAIWWYNMLRRPAVDIESFGDPYFDALVADYASLGWRLWALDITHDLRMPVFVA HHHCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHH LARETATGRFSIGFGCHLDSRIALQRALTEVNQLLDVGASAPPPWDADKLPDDAFLHPDP HHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC ALPPTRGPSRASHGACDLKGDIENGVARLSAAGIDTLVVDKTRPDIGLPVVQVIAPGLCH CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH FWPRFGAPRLYSVPVAERWCERPRDEDELNRALLFL HHHCCCCCCEEECCHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MLDDFSRVLRFKPHLLVRDTGSGALYVVDEFRRSVLPGDVFPALAACMRDRLTIAQTFAA CCCHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LAARFSQWEVLAALDHLVRRGYVRADAPGERDAAIGFYERTGVDGDAASDIASRLAVAVD HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHH AFGVDPRAQLDAFAACGIGVAPDAPLTVALADGYERAELIDAAERAAARGDALLVVVPDR HCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCH VEPLLGPLLGPPAGARSASASTEEAGADAPPCIECVRYWTALNRPVETLLARLHGSDAAR HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC LPGAHSRASEAAVAAVVASFVEQIAVNAQRRRHASAHIVSLRVDTLATAAHRVVRRPQCP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEHHHHHHHHHHHHHCCCCCC RCGNARWMREQAERPVTLASADAGARREGGYRTLAAAELVKRYGHLISPVSGPIAYLHPM CCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCC PGRNAGLRHVYVAGYLVCPPSAPRENRFDKLCSGKGASDAQARASALAEALERFSGVHQG CCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC DEATLRGSLAELSAHAPPGGGPIDVNALQQYSDRQFERRERHNATTDDPRKQVPQRFTRD CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC SVIDWTPAWSIATGARRLVPLAYCYAETPAASGAAYCVHNPNGCAAGACIEEAILQGLLE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH LVERDAVAIWWYNMLRRPAVDIESFGDPYFDALVADYASLGWRLWALDITHDLRMPVFVA HHHCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHH LARETATGRFSIGFGCHLDSRIALQRALTEVNQLLDVGASAPPPWDADKLPDDAFLHPDP HHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC ALPPTRGPSRASHGACDLKGDIENGVARLSAAGIDTLVVDKTRPDIGLPVVQVIAPGLCH CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH FWPRFGAPRLYSVPVAERWCERPRDEDELNRALLFL HHHCCCCCCEEECCHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]