| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is ppx [H]
Identifier: 83718453
GI number: 83718453
Start: 3175073
End: 3176587
Strand: Reverse
Name: ppx [H]
Synonym: BTH_I2765
Alternate gene names: 83718453
Gene position: 3176587-3175073 (Counterclockwise)
Preceding gene: 83720326
Following gene: 83720067
Centisome position: 83.39
GC content: 68.78
Gene sequence:
>1515_bases ATGGTTACATCCCCGCATCTACTGGCTGCCGTCGATCTCGGCTCGAACAGCTTCCGGCTCATCGTCGGGCGCGTCGAGGA GACGCCCGCGGGCAGCCAGATCTACCCCGTCGACGCGCTGCGCGAGCCCGTGCGGCTCGCGGCGGGCCTGTCCCGCGACA AGATGCTCGATCGCGCGTCGCAGGAGCGCGGCTGGGAAGCGCTCAAGCGCTTCGGCGAGCGGCTGCGCGATTTCCACCCG GATCACGTGCGCGCGGTCGCGACCAACACGCTGCGGGTCGCGAAGAACGCCGGCGAGTTTCTCGCCGAGGCGGAGGCGGC GCTCGGTTTTCCGATCGAGGTGATCGCGGGCCGCGAGGAGGCGCGCCTCATCTACGCGGGCGCCGCGCACTCGGTGCCGG CGAGCGCCGGCAAGCGGCTCGTCGTCGACATTGGCGGCGGCTCGACCGAGTTCATCATCGGCCAGCATTACACGCCGCTC GTGATGGAGAGCCTTTACATCGGCTGCGTGAGCCATAGCCGCGCGTTCTTTCCGGCCGGCAACGTCGACGAATACACGAT GCGCCAGGCCGAGCTCGCTGCGAAGCGCGAGATCCAGATCATCTCCGGCGAATACAAGAAGGCGGGGTGGGATCAGGCGA TCGGCTCGTCCGGCACGGCGCGCGCGCTCGCGGAGCTCGTCGAGGCGAACGGCTTCAACGACGCGGGCGTGTCGCACGGA ATCTCGCGCGGCGGCCTCGAGCGCCTGAAGCGCGCGCTCATCAAGGCCGAGAACGTGAACCGGCTGAAGCTCGTCGCGCT GAAGCCCGATCGCGTGCCGGTGCTCGCGGGCGGGCTGTCGATCATGCTCGCGGTGTTCGAGGAACTCGGCATCGACTACG TCGACACGACGGACGGCGCGCTGCGCCTGGGCGTGCTGTACGACCTGCTCGGCCGCACGCAGCACGAGGACATGCGCGCG GTGACGGTCGACGGCTTCACGCGCCGCTACGGCGTCGATCGCGCGCAGGCGGCGCGCATCGGCGCGCTCGCCGCGCGCTT CTACGACCAGCTCGACGAGCCCGAAGGCGAGGATCGCGATGAAAGCCGCACGTTCCTCGGCTGGGCGGCCGCGCTGCACG AGATCGGGCTGTCGATTTCGCACAGTGCGTACCACAAGCATTCGGCGTACATCGCGAGCAACGCCGACATGCCGGGCTTC TCGCGCACCGACCAGGCGCGGCTCGCCGCGCTCGTGCTCGGGCACGCGGGCAAGCTCGGCAAGTTGTCGCAGTCGCGAGA AGTCGAGTGGCCGCTGTTGTTCTGCCTGCGCCTCGCCGCGCTGCTGTGCCGGCGCCGCAACGACGCCGGCTTGCCCGACA TTGACGTCGCGCAGATGAAAAAGGGCGGCTACGAAGTGCACCTGCCGAGCGCATGGGTTCAGCAGAATCCGCTCACCGAC TACAACCTCAGTCAGGAGGCTGCCGAGTGGGAGAAGGTCGGCATTCCGTATCGTGTCGTCTATACCGGCGCGTGA
Upstream 100 bases:
>100_bases ACCGACACCGGAAGGCGCGCAGCGCTTAAAATGGCGCCTTTGATCTTTTCGGTGCGCGCAGTGTCGCCTGCGCGCGCCAG GCGAGAACGGAGCCCCCTCG
Downstream 100 bases:
>100_bases TCCGGTTGCGGTGCGGCGGCGCGTCTGCCCCCGGGCGGCGGGGTGCGCCGGTTCGTGACCGCCGCCGCGCGGCGGGCGTT TCCGGGCGCTCCAGCGGAGG
Product: exopolyphosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MVTSPHLLAAVDLGSNSFRLIVGRVEETPAGSQIYPVDALREPVRLAAGLSRDKMLDRASQERGWEALKRFGERLRDFHP DHVRAVATNTLRVAKNAGEFLAEAEAALGFPIEVIAGREEARLIYAGAAHSVPASAGKRLVVDIGGGSTEFIIGQHYTPL VMESLYIGCVSHSRAFFPAGNVDEYTMRQAELAAKREIQIISGEYKKAGWDQAIGSSGTARALAELVEANGFNDAGVSHG ISRGGLERLKRALIKAENVNRLKLVALKPDRVPVLAGGLSIMLAVFEELGIDYVDTTDGALRLGVLYDLLGRTQHEDMRA VTVDGFTRRYGVDRAQAARIGALAARFYDQLDEPEGEDRDESRTFLGWAAALHEIGLSISHSAYHKHSAYIASNADMPGF SRTDQARLAALVLGHAGKLGKLSQSREVEWPLLFCLRLAALLCRRRNDAGLPDIDVAQMKKGGYEVHLPSAWVQQNPLTD YNLSQEAAEWEKVGIPYRVVYTGA
Sequences:
>Translated_504_residues MVTSPHLLAAVDLGSNSFRLIVGRVEETPAGSQIYPVDALREPVRLAAGLSRDKMLDRASQERGWEALKRFGERLRDFHP DHVRAVATNTLRVAKNAGEFLAEAEAALGFPIEVIAGREEARLIYAGAAHSVPASAGKRLVVDIGGGSTEFIIGQHYTPL VMESLYIGCVSHSRAFFPAGNVDEYTMRQAELAAKREIQIISGEYKKAGWDQAIGSSGTARALAELVEANGFNDAGVSHG ISRGGLERLKRALIKAENVNRLKLVALKPDRVPVLAGGLSIMLAVFEELGIDYVDTTDGALRLGVLYDLLGRTQHEDMRA VTVDGFTRRYGVDRAQAARIGALAARFYDQLDEPEGEDRDESRTFLGWAAALHEIGLSISHSAYHKHSAYIASNADMPGF SRTDQARLAALVLGHAGKLGKLSQSREVEWPLLFCLRLAALLCRRRNDAGLPDIDVAQMKKGGYEVHLPSAWVQQNPLTD YNLSQEAAEWEKVGIPYRVVYTGA >Mature_504_residues MVTSPHLLAAVDLGSNSFRLIVGRVEETPAGSQIYPVDALREPVRLAAGLSRDKMLDRASQERGWEALKRFGERLRDFHP DHVRAVATNTLRVAKNAGEFLAEAEAALGFPIEVIAGREEARLIYAGAAHSVPASAGKRLVVDIGGGSTEFIIGQHYTPL VMESLYIGCVSHSRAFFPAGNVDEYTMRQAELAAKREIQIISGEYKKAGWDQAIGSSGTARALAELVEANGFNDAGVSHG ISRGGLERLKRALIKAENVNRLKLVALKPDRVPVLAGGLSIMLAVFEELGIDYVDTTDGALRLGVLYDLLGRTQHEDMRA VTVDGFTRRYGVDRAQAARIGALAARFYDQLDEPEGEDRDESRTFLGWAAALHEIGLSISHSAYHKHSAYIASNADMPGF SRTDQARLAALVLGHAGKLGKLSQSREVEWPLLFCLRLAALLCRRRNDAGLPDIDVAQMKKGGYEVHLPSAWVQQNPLTD YNLSQEAAEWEKVGIPYRVVYTGA
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=497, Percent_Identity=38.0281690140845, Blast_Score=329, Evalue=3e-91, Organism=Escherichia coli, GI48994966, Length=497, Percent_Identity=37.8269617706237, Blast_Score=306, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 54965; Mature: 54965
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSPHLLAAVDLGSNSFRLIVGRVEETPAGSQIYPVDALREPVRLAAGLSRDKMLDRAS CCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHH QERGWEALKRFGERLRDFHPDHVRAVATNTLRVAKNAGEFLAEAEAALGFPIEVIAGREE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC ARLIYAGAAHSVPASAGKRLVVDIGGGSTEFIIGQHYTPLVMESLYIGCVSHSRAFFPAG CEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEECCCC NVDEYTMRQAELAAKREIQIISGEYKKAGWDQAIGSSGTARALAELVEANGFNDAGVSHG CCCHHHHHHHHHHHHHEEEEECCCCHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHCC ISRGGLERLKRALIKAENVNRLKLVALKPDRVPVLAGGLSIMLAVFEELGIDYVDTTDGA CCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCEEECCCCH LRLGVLYDLLGRTQHEDMRAVTVDGFTRRYGVDRAQAARIGALAARFYDQLDEPEGEDRD HHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC ESRTFLGWAAALHEIGLSISHSAYHKHSAYIASNADMPGFSRTDQARLAALVLGHAGKLG HHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC KLSQSREVEWPLLFCLRLAALLCRRRNDAGLPDIDVAQMKKGGYEVHLPSAWVQQNPLTD CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEECCHHHHCCCCCCC YNLSQEAAEWEKVGIPYRVVYTGA CCCCHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MVTSPHLLAAVDLGSNSFRLIVGRVEETPAGSQIYPVDALREPVRLAAGLSRDKMLDRAS CCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHH QERGWEALKRFGERLRDFHPDHVRAVATNTLRVAKNAGEFLAEAEAALGFPIEVIAGREE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC ARLIYAGAAHSVPASAGKRLVVDIGGGSTEFIIGQHYTPLVMESLYIGCVSHSRAFFPAG CEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEECCCC NVDEYTMRQAELAAKREIQIISGEYKKAGWDQAIGSSGTARALAELVEANGFNDAGVSHG CCCHHHHHHHHHHHHHEEEEECCCCHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHCC ISRGGLERLKRALIKAENVNRLKLVALKPDRVPVLAGGLSIMLAVFEELGIDYVDTTDGA CCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCEEECCCCH LRLGVLYDLLGRTQHEDMRAVTVDGFTRRYGVDRAQAARIGALAARFYDQLDEPEGEDRD HHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC ESRTFLGWAAALHEIGLSISHSAYHKHSAYIASNADMPGFSRTDQARLAALVLGHAGKLG HHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC KLSQSREVEWPLLFCLRLAALLCRRRNDAGLPDIDVAQMKKGGYEVHLPSAWVQQNPLTD CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEECCHHHHCCCCCCC YNLSQEAAEWEKVGIPYRVVYTGA CCCCHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]