| Definition | Moorella thermoacetica ATCC 39073, complete genome. |
|---|---|
| Accession | NC_007644 |
| Length | 2,628,784 |
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The map label for this gene is ilvD
Identifier: 83591080
GI number: 83591080
Start: 2364747
End: 2366405
Strand: Reverse
Name: ilvD
Synonym: Moth_2259
Alternate gene names: 83591080
Gene position: 2366405-2364747 (Counterclockwise)
Preceding gene: 83591081
Following gene: 83591079
Centisome position: 90.02
GC content: 59.86
Gene sequence:
>1659_bases GTGCGCAGCGATGCTATGAAAACGGGCCTGGCCCGGGCTCCCCACAGATCGTTACTTAAAGCCATGGGCCTGACCGAGAC GGAAATCGAGCGGCCGATTATAGGTGTTGTCAATGCCCATAATGAACTCATTCCCGGCCATATACATTTAAATAACCTGG TGGAAGCCGTAAAAGCAGGGGTGCGCCTGGCCGGCGGTACGCCCCTGGAGTTTCCCACTATCGGTGTCTGTGATGGCCTG GCCATGAACCATGTGGGGATGAAGTATTCCCTGGCCAGCCGGGAGCTCATCGCCGATATGATTGAAGTAATGGCTATGGC CCATCCCTTTGACGCCCTGGTATTTATCCCTAACTGCGATAAGATCGTCCCCGGGATGCTTATGGCAGCAGCCCGCCTGA ACCTCCCTGCCATTTTTATCAGCGGCGGTCCCATGCTGGCCGGCCGTTACCAGGGCCGGGATGTTTCCCTGAGTACTATG TTCGAGGCTGTAGGGGCTGTCCAGGCCGGGAAGATGACAGAACAGGAACTGGCCGCCCTGGAGGACTGCGCCTGCCCGGG CTGTGGTTCCTGTGCGGGTATGTTTACCGCCAACACCATGAACTGCATGGTTGAGGCCTTAGGGATGGGCCTGCCGGGTA ACGGTACTACCCCTGCAGTGAGCGGCTCCCGGGTACGTTTGGCTAAAGAAGCCGGTATGCAGGTGATGAAATTACTCCAG GAAAATATCCGGCCCCTGGATATTATGACGGCTACAGCCTTCCGCAATGCCGTGGCCGTGGATATGGCCCTGGGTGGTTC GACCAATACCTGCCTGCACCTGCCGGCCATAGCCCATGAAGCCGGCGTAAAACTTGACCTGAATACTTTCAACGAAATCA ATCGGCGGACGCCCCAGATCTGTAAGCTCAGCCCGGCCGGCAGCCAGCACATCCAGGACCTGGATGAGGCCGGCGGTATC CCGGCGGTGATGAATGAGCTCTACCGTCATGGCCTGATTGACGGCAGCGCCCTTACTGTGACCGGACGGACAGTGGCTGA TAACGTCAGCGGTCGGGTGGTAAGCCGGCGCGAGGTTATCCGGCCTGTGGAAGACCCCTACAGCAGGGAAGGTGGCCTGG CCGTATTGTATGGCAACCTGGCTCCTGAGGGTGCCGTTGTAAAGAAGGGCGCCGTGCTGCCGGAGATGATGCGGCATGAA GGGCCGGCGCGGGTATTTAACAGCGAGGAAGAGGCTTTTGCCGCCATTATGGGGAAGCAGATTAAACCCGGGGATGTGGT GGTAATCCGCTACGAAGGCCCTCGTGGCGGTCCGGGTATGCAGGAAATGCTCAGTCCCACGGCAGCCCTGGCCGGTATGG GCTTGGACAGCTCCGTGGCTCTGATCACTGACGGCCGTTTCTCCGGTGCCAGCCGTGGCGCCTCTATCGGTCACGTCTCG CCGGAAGCAGCGGCCGGGGGGCTCATCGCCCTGGTGGAAGAAGGAGATATCATCGCCATCGATATTGAAGCCGGCAAGCT GGAACTTAAGGTGCCGGAAGAAGAAATTGCCCGCCGCCGCCAGAATTGGCAGGCGCCGCCGCCGAAGATCACCGGCGGTT ACCTGGGCCGCTACGCGCGCATGGTTACTTCCGGAGCCAGGGGCGCGGTGTTGGAGTAA
Upstream 100 bases:
>100_bases CCAGCCGGGCCCCATAACCAGGGATCTCATTGCCCGGTACCGTGAGTTAACTAAAACCGACGGTCCGAAAATCTTTGCCT GATCAAGGGAGAGGAAAACC
Downstream 100 bases:
>100_bases AATATTTTAAGCGCAAAGGGGTGCTTTTTACCATTGGGGATCGAGCTGAAGGCAAAAAACTAACCGGAGCGGAGATTATT GTTCAGGCCCTCCAGGCAGA
Product: dihydroxyacid dehydratase
Products: NA
Alternate protein names: DAD
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MRSDAMKTGLARAPHRSLLKAMGLTETEIERPIIGVVNAHNELIPGHIHLNNLVEAVKAGVRLAGGTPLEFPTIGVCDGL AMNHVGMKYSLASRELIADMIEVMAMAHPFDALVFIPNCDKIVPGMLMAAARLNLPAIFISGGPMLAGRYQGRDVSLSTM FEAVGAVQAGKMTEQELAALEDCACPGCGSCAGMFTANTMNCMVEALGMGLPGNGTTPAVSGSRVRLAKEAGMQVMKLLQ ENIRPLDIMTATAFRNAVAVDMALGGSTNTCLHLPAIAHEAGVKLDLNTFNEINRRTPQICKLSPAGSQHIQDLDEAGGI PAVMNELYRHGLIDGSALTVTGRTVADNVSGRVVSRREVIRPVEDPYSREGGLAVLYGNLAPEGAVVKKGAVLPEMMRHE GPARVFNSEEEAFAAIMGKQIKPGDVVVIRYEGPRGGPGMQEMLSPTAALAGMGLDSSVALITDGRFSGASRGASIGHVS PEAAAGGLIALVEEGDIIAIDIEAGKLELKVPEEEIARRRQNWQAPPPKITGGYLGRYARMVTSGARGAVLE
Sequences:
>Translated_552_residues MRSDAMKTGLARAPHRSLLKAMGLTETEIERPIIGVVNAHNELIPGHIHLNNLVEAVKAGVRLAGGTPLEFPTIGVCDGL AMNHVGMKYSLASRELIADMIEVMAMAHPFDALVFIPNCDKIVPGMLMAAARLNLPAIFISGGPMLAGRYQGRDVSLSTM FEAVGAVQAGKMTEQELAALEDCACPGCGSCAGMFTANTMNCMVEALGMGLPGNGTTPAVSGSRVRLAKEAGMQVMKLLQ ENIRPLDIMTATAFRNAVAVDMALGGSTNTCLHLPAIAHEAGVKLDLNTFNEINRRTPQICKLSPAGSQHIQDLDEAGGI PAVMNELYRHGLIDGSALTVTGRTVADNVSGRVVSRREVIRPVEDPYSREGGLAVLYGNLAPEGAVVKKGAVLPEMMRHE GPARVFNSEEEAFAAIMGKQIKPGDVVVIRYEGPRGGPGMQEMLSPTAALAGMGLDSSVALITDGRFSGASRGASIGHVS PEAAAGGLIALVEEGDIIAIDIEAGKLELKVPEEEIARRRQNWQAPPPKITGGYLGRYARMVTSGARGAVLE >Mature_552_residues MRSDAMKTGLARAPHRSLLKAMGLTETEIERPIIGVVNAHNELIPGHIHLNNLVEAVKAGVRLAGGTPLEFPTIGVCDGL AMNHVGMKYSLASRELIADMIEVMAMAHPFDALVFIPNCDKIVPGMLMAAARLNLPAIFISGGPMLAGRYQGRDVSLSTM FEAVGAVQAGKMTEQELAALEDCACPGCGSCAGMFTANTMNCMVEALGMGLPGNGTTPAVSGSRVRLAKEAGMQVMKLLQ ENIRPLDIMTATAFRNAVAVDMALGGSTNTCLHLPAIAHEAGVKLDLNTFNEINRRTPQICKLSPAGSQHIQDLDEAGGI PAVMNELYRHGLIDGSALTVTGRTVADNVSGRVVSRREVIRPVEDPYSREGGLAVLYGNLAPEGAVVKKGAVLPEMMRHE GPARVFNSEEEAFAAIMGKQIKPGDVVVIRYEGPRGGPGMQEMLSPTAALAGMGLDSSVALITDGRFSGASRGASIGHVS PEAAAGGLIALVEEGDIIAIDIEAGKLELKVPEEEIARRRQNWQAPPPKITGGYLGRYARMVTSGARGAVLE
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family
Homologues:
Organism=Escherichia coli, GI48994964, Length=606, Percent_Identity=42.9042904290429, Blast_Score=469, Evalue=1e-133, Organism=Escherichia coli, GI1788157, Length=520, Percent_Identity=33.4615384615385, Blast_Score=228, Evalue=9e-61, Organism=Escherichia coli, GI1786464, Length=527, Percent_Identity=33.965844402277, Blast_Score=225, Evalue=4e-60, Organism=Escherichia coli, GI2367371, Length=502, Percent_Identity=32.8685258964143, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6322476, Length=547, Percent_Identity=41.8647166361974, Blast_Score=420, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ILVD_MOOTA (Q2RG93)
Other databases:
- EMBL: CP000232 - RefSeq: YP_431089.1 - STRING: Q2RG93 - GeneID: 3830754 - GenomeReviews: CP000232_GR - KEGG: mta:Moth_2259 - NMPDR: fig|264732.9.peg.2290 - eggNOG: COG0129 - HOGENOM: HBG671001 - OMA: SIERNAC - PhylomeDB: Q2RG93 - BioCyc: MTHE264732:MOTH_2259-MONOMER - HAMAP: MF_00012 - InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 - PANTHER: PTHR21000 - TIGRFAMs: TIGR00110
Pfam domain/function: PF00920 ILVD_EDD; SSF52016 Aconitase/3IPM_dehydase_swvl
EC number: =4.2.1.9
Molecular weight: Translated: 58121; Mature: 58121
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00886 ILVD_EDD_1; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSDAMKTGLARAPHRSLLKAMGLTETEIERPIIGVVNAHNELIPGHIHLNNLVEAVKAG CCCHHHHHHHCCCCHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCCEEEHHHHHHHHHHC VRLAGGTPLEFPTIGVCDGLAMNHVGMKYSLASRELIADMIEVMAMAHPFDALVFIPNCD EEECCCCCCCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCC KIVPGMLMAAARLNLPAIFISGGPMLAGRYQGRDVSLSTMFEAVGAVQAGKMTEQELAAL HHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH EDCACPGCGSCAGMFTANTMNCMVEALGMGLPGNGTTPAVSGSRVRLAKEAGMQVMKLLQ HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH ENIRPLDIMTATAFRNAVAVDMALGGSTNTCLHLPAIAHEAGVKLDLNTFNEINRRTPQI HCCCCEEEEHHHHHHCCEEEEEEECCCCCCEEECCHHHHHCCCEEECHHHHHHHCCCCCE CKLSPAGSQHIQDLDEAGGIPAVMNELYRHGLIDGSALTVTGRTVADNVSGRVVSRREVI EEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCEECHHHHH RPVEDPYSREGGLAVLYGNLAPEGAVVKKGAVLPEMMRHEGPARVFNSEEEAFAAIMGKQ CCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCHHHHHCCCCHHHCCCHHHHHHHHHCCC IKPGDVVVIRYEGPRGGPGMQEMLSPTAALAGMGLDSSVALITDGRFSGASRGASIGHVS CCCCCEEEEEECCCCCCCCHHHHHCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCC PEAAAGGLIALVEEGDIIAIDIEAGKLELKVPEEEIARRRQNWQAPPPKITGGYLGRYAR CHHHCCCEEEEEECCCEEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHH MVTSGARGAVLE HHHCCCCCCCCC >Mature Secondary Structure MRSDAMKTGLARAPHRSLLKAMGLTETEIERPIIGVVNAHNELIPGHIHLNNLVEAVKAG CCCHHHHHHHCCCCHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCCEEEHHHHHHHHHHC VRLAGGTPLEFPTIGVCDGLAMNHVGMKYSLASRELIADMIEVMAMAHPFDALVFIPNCD EEECCCCCCCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCC KIVPGMLMAAARLNLPAIFISGGPMLAGRYQGRDVSLSTMFEAVGAVQAGKMTEQELAAL HHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH EDCACPGCGSCAGMFTANTMNCMVEALGMGLPGNGTTPAVSGSRVRLAKEAGMQVMKLLQ HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH ENIRPLDIMTATAFRNAVAVDMALGGSTNTCLHLPAIAHEAGVKLDLNTFNEINRRTPQI HCCCCEEEEHHHHHHCCEEEEEEECCCCCCEEECCHHHHHCCCEEECHHHHHHHCCCCCE CKLSPAGSQHIQDLDEAGGIPAVMNELYRHGLIDGSALTVTGRTVADNVSGRVVSRREVI EEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCEECHHHHH RPVEDPYSREGGLAVLYGNLAPEGAVVKKGAVLPEMMRHEGPARVFNSEEEAFAAIMGKQ CCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCHHHHHCCCCHHHCCCHHHHHHHHHCCC IKPGDVVVIRYEGPRGGPGMQEMLSPTAALAGMGLDSSVALITDGRFSGASRGASIGHVS CCCCCEEEEEECCCCCCCCHHHHHCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCC PEAAAGGLIALVEEGDIIAIDIEAGKLELKVPEEEIARRRQNWQAPPPKITGGYLGRYAR CHHHCCCEEEEEECCCEEEEEECCCEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHH MVTSGARGAVLE HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA