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The map label for this gene is ydiC [H]

Identifier: 83590982

GI number: 83590982

Start: 2262530

End: 2263216

Strand: Reverse

Name: ydiC [H]

Synonym: Moth_2159

Alternate gene names: 83590982

Gene position: 2263216-2262530 (Counterclockwise)

Preceding gene: 83590983

Following gene: 83590981

Centisome position: 86.09

GC content: 60.99

Gene sequence:

>687_bases
TTGTTGGTCCTGGGGGTTGATAGTGCCACCCAGGTTGCCGCGGCAGCCATTGTCGACGATAAGCAACTGGTGGCTGAACT
TTTTTTTAATACCCGCAAGAATCACTCCCAGCGTTTGTTACCCATGATCGCTGCCCTGCTGGCGGAAACCGGGGTCGAAC
TGGCGGACCTGGATGGCCTGGCCGTAAGCCTGGGACCCGGGTCCTTCACCGGCCTCCGCATCGGCCTGGCAACGGTTAAA
GGCCTGGCCCAAGCGGCCGGTAAACCCCTGGTTGGTATACCGACCCTGGATGCCCTGGCCTGGAACGCCTGGGGAGTGCC
GGGGTTGATTTGTCCCGTAATCCAGGCCCGGCGCCTGGAAGTATATACCGCCCTTTTTCGCTGGCAGGAGGGAGAGTTAT
GCCGTTTAACCCCGTACCAGGCAGTAGACCCGGACTCGCTGGTATCATTGCTAAAGTCCTGCACTACACCGGTTTACTTC
TTAGGCGATGGAGTAGCCCCCTACTGGGAGGTATGGCAGCAACTGGGATCCCGGGCTCACTTTCTCCCGCCGCCAAACAA
TTTATCCAGAGCGGCACCGGTCGCCATCCTGGGAGGGGAACGCCTCCGGACCGGCCGGCCCGACGATCTTTCCCGATTAA
AGCCACTCTACCTCCGGCCGGCACCGGCGGAGAGGCAGGCCCGTTGA

Upstream 100 bases:

>100_bases
TTCCTGGAAATTAAACTGGAGTATGCGCCGGAGGGGCGCCGGGCCATTATCAAGGCGCGGGGACCGGCCTATGAAAGAGT
GCTGGAGGAGTTGAAAAAGA

Downstream 100 bases:

>100_bases
CCGTCCAGATTTTGCCCATGATCAACGAGTATCTAAACGGGGTGCTGGCCATCGAGCGGGTTTCCTTTCCCACACCCTGG
ACGCGCCACTCCTTCCAGAA

Product: peptidase M22, glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLVLGVDSATQVAAAAIVDDKQLVAELFFNTRKNHSQRLLPMIAALLAETGVELADLDGLAVSLGPGSFTGLRIGLATVK
GLAQAAGKPLVGIPTLDALAWNAWGVPGLICPVIQARRLEVYTALFRWQEGELCRLTPYQAVDPDSLVSLLKSCTTPVYF
LGDGVAPYWEVWQQLGSRAHFLPPPNNLSRAAPVAILGGERLRTGRPDDLSRLKPLYLRPAPAERQAR

Sequences:

>Translated_228_residues
MLVLGVDSATQVAAAAIVDDKQLVAELFFNTRKNHSQRLLPMIAALLAETGVELADLDGLAVSLGPGSFTGLRIGLATVK
GLAQAAGKPLVGIPTLDALAWNAWGVPGLICPVIQARRLEVYTALFRWQEGELCRLTPYQAVDPDSLVSLLKSCTTPVYF
LGDGVAPYWEVWQQLGSRAHFLPPPNNLSRAAPVAILGGERLRTGRPDDLSRLKPLYLRPAPAERQAR
>Mature_228_residues
MLVLGVDSATQVAAAAIVDDKQLVAELFFNTRKNHSQRLLPMIAALLAETGVELADLDGLAVSLGPGSFTGLRIGLATVK
GLAQAAGKPLVGIPTLDALAWNAWGVPGLICPVIQARRLEVYTALFRWQEGELCRLTPYQAVDPDSLVSLLKSCTTPVYF
LGDGVAPYWEVWQQLGSRAHFLPPPNNLSRAAPVAILGGERLRTGRPDDLSRLKPLYLRPAPAERQAR

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=231, Percent_Identity=29.4372294372294, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 24569; Mature: 24569

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLGVDSATQVAAAAIVDDKQLVAELFFNTRKNHSQRLLPMIAALLAETGVELADLDGL
CEEECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCE
AVSLGPGSFTGLRIGLATVKGLAQAAGKPLVGIPTLDALAWNAWGVPGLICPVIQARRLE
EEEECCCCCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCCCCCCCHHHHHHHHHHHHH
VYTALFRWQEGELCRLTPYQAVDPDSLVSLLKSCTTPVYFLGDGVAPYWEVWQQLGSRAH
HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCC
FLPPPNNLSRAAPVAILGGERLRTGRPDDLSRLKPLYLRPAPAERQAR
CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCEEECCCCCCCCCC
>Mature Secondary Structure
MLVLGVDSATQVAAAAIVDDKQLVAELFFNTRKNHSQRLLPMIAALLAETGVELADLDGL
CEEECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCE
AVSLGPGSFTGLRIGLATVKGLAQAAGKPLVGIPTLDALAWNAWGVPGLICPVIQARRLE
EEEECCCCCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCCCCCCCHHHHHHHHHHHHH
VYTALFRWQEGELCRLTPYQAVDPDSLVSLLKSCTTPVYFLGDGVAPYWEVWQQLGSRAH
HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCC
FLPPPNNLSRAAPVAILGGERLRTGRPDDLSRLKPLYLRPAPAERQAR
CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]