Click here to switch to the map view.

The map label for this gene is ydiB [H]

Identifier: 83590983

GI number: 83590983

Start: 2263197

End: 2263664

Strand: Reverse

Name: ydiB [H]

Synonym: Moth_2160

Alternate gene names: 83590983

Gene position: 2263664-2263197 (Counterclockwise)

Preceding gene: 83590984

Following gene: 83590982

Centisome position: 86.11

GC content: 58.12

Gene sequence:

>468_bases
ATGGAAATATGGTTAAAGGATGCCGGAGCGACCCGGAAACTGGGAGAGGAACTGGCCGGTATCCTCAATCCCGGCGACAT
TCTTATTCTAAACGGGGAGCTGGGGGCCGGTAAAACCACCTTGACCCAGGGCCTGGCGCAGGGGCTGGGGGTAACCACGC
CGGTTACCAGTCCTACCTTTACCTTGATTCAGGAATATCGGGGCCGTTACCCCCTTTACCATATCGACCTCTATCGCCTG
GAGGACCCGGAGGCCATGCTGGACCTGGGCCTGGAAGAGTATTTTGGCGGTGAGGGTATAACCGTGGTCGAGTGGGGAGG
ACGCCTGGACCCTTATTTGCCGCCGGCCTTCCTGGAAATTAAACTGGAGTATGCGCCGGAGGGGCGCCGGGCCATTATCA
AGGCGCGGGGACCGGCCTATGAAAGAGTGCTGGAGGAGTTGAAAAAGATTGTTGGTCCTGGGGGTTGA

Upstream 100 bases:

>100_bases
GCCAACCAATAATCGCCCTGATTTGGCCGAAATCTATCTCCGGAGGAGGTCGGTTTACACTCCGGTGGGGAGTGTAATAA
TAAGGTACTGGGTGAGAGAT

Downstream 100 bases:

>100_bases
TAGTGCCACCCAGGTTGCCGCGGCAGCCATTGTCGACGATAAGCAACTGGTGGCTGAACTTTTTTTTAATACCCGCAAGA
ATCACTCCCAGCGTTTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MEIWLKDAGATRKLGEELAGILNPGDILILNGELGAGKTTLTQGLAQGLGVTTPVTSPTFTLIQEYRGRYPLYHIDLYRL
EDPEAMLDLGLEEYFGGEGITVVEWGGRLDPYLPPAFLEIKLEYAPEGRRAIIKARGPAYERVLEELKKIVGPGG

Sequences:

>Translated_155_residues
MEIWLKDAGATRKLGEELAGILNPGDILILNGELGAGKTTLTQGLAQGLGVTTPVTSPTFTLIQEYRGRYPLYHIDLYRL
EDPEAMLDLGLEEYFGGEGITVVEWGGRLDPYLPPAFLEIKLEYAPEGRRAIIKARGPAYERVLEELKKIVGPGG
>Mature_155_residues
MEIWLKDAGATRKLGEELAGILNPGDILILNGELGAGKTTLTQGLAQGLGVTTPVTSPTFTLIQEYRGRYPLYHIDLYRL
EDPEAMLDLGLEEYFGGEGITVVEWGGRLDPYLPPAFLEIKLEYAPEGRRAIIKARGPAYERVLEELKKIVGPGG

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=146, Percent_Identity=40.4109589041096, Blast_Score=103, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 16984; Mature: 16984

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIWLKDAGATRKLGEELAGILNPGDILILNGELGAGKTTLTQGLAQGLGVTTPVTSPTF
CEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHH
TLIQEYRGRYPLYHIDLYRLEDPEAMLDLGLEEYFGGEGITVVEWGGRLDPYLPPAFLEI
HHHHHHCCCCCEEEEEEEEECCCHHHHHCCHHHHHCCCCEEEEEECCCCCCCCCCEEEEE
KLEYAPEGRRAIIKARGPAYERVLEELKKIVGPGG
EEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEIWLKDAGATRKLGEELAGILNPGDILILNGELGAGKTTLTQGLAQGLGVTTPVTSPTF
CEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHH
TLIQEYRGRYPLYHIDLYRLEDPEAMLDLGLEEYFGGEGITVVEWGGRLDPYLPPAFLEI
HHHHHHCCCCCEEEEEEEEECCCHHHHHCCHHHHHCCCCEEEEEECCCCCCCCCCEEEEE
KLEYAPEGRRAIIKARGPAYERVLEELKKIVGPGG
EEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]